RNA–Protein interactions for RNA: ENST00000597724.6

SSBP4-204, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 5

Gene SSBP4, Length 865 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-204ENST00000597724 TIGD2Q4W5G0 525 aa15.14■□□□□ 0.01
SSBP4-204ENST00000597724 DDX59Q5T1V6 619 aaKnown RBP eCLIP15.14■□□□□ 0.018e-6■■■■■ 27.9
SSBP4-204ENST00000597724 ATAD3BQ5T9A4 648 aa15.14■□□□□ 0.01
SSBP4-204ENST00000597724 RAET1LQ5VY80 246 aa15.14■□□□□ 0.01
SSBP4-204ENST00000597724 NSUN5P2Q63ZY6 315 aa15.14■□□□□ 0.01
SSBP4-204ENST00000597724 ZNF787Q6DD87 383 aa15.14■□□□□ 0.01
SSBP4-204ENST00000597724 TNFAIP8L2Q6P589 184 aaPredicted RBP15.14■□□□□ 0.01
SSBP4-204ENST00000597724 C16orf62Q7Z3J2 963 aa15.14■□□□□ 0.01
SSBP4-204ENST00000597724 LACC1Q8IV20 430 aa15.14■□□□□ 0.01
SSBP4-204ENST00000597724 PHOSPHO1Q8TCT1 267 aa15.14■□□□□ 0.01
SSBP4-204ENST00000597724 SH3YL1Q96HL8 342 aaPredicted RBP15.14■□□□□ 0.01
SSBP4-204ENST00000597724 NMUR2Q9GZQ4 415 aa15.14■□□□□ 0.01
SSBP4-204ENST00000597724 RMND5AQ9H871 391 aa15.14■□□□□ 0.01
SSBP4-204ENST00000597724 CHST11Q9NPF2 352 aa15.14■□□□□ 0.01
SSBP4-204ENST00000597724 SLC6A13Q9NSD5 602 aa15.14■□□□□ 0.01
SSBP4-204ENST00000597724 Q9UFV3 132 aa15.14■□□□□ 0.01
SSBP4-204ENST00000597724 KCNE5Q9UJ90 142 aa15.14■□□□□ 0.01
SSBP4-204ENST00000597724 MKLN1Q9UL63 735 aa15.14■□□□□ 0.01
SSBP4-204ENST00000597724 ZNF337Q9Y3M9 751 aa15.14■□□□□ 0.01
SSBP4-204ENST00000597724 DTNAQ9Y4J8 743 aa15.14■□□□□ 0.01
SSBP4-204ENST00000597724 CD8B2A6NJW9 211 aa15.13■□□□□ 0.01
SSBP4-204ENST00000597724 LINC01387J3KSC0 135 aa15.13■□□□□ 0.01
SSBP4-204ENST00000597724 GUSBP08236 651 aa15.13■□□□□ 0.01
SSBP4-204ENST00000597724 ZNF708P17019 499 aa15.13■□□□□ 0.01
SSBP4-204ENST00000597724 CEACAM8P31997 349 aaPredicted RBP15.13■□□□□ 0.01
SSBP4-204ENST00000597724 CLDN18P56856 261 aa15.13■□□□□ 0.01
SSBP4-204ENST00000597724 ZNF117Q03924 483 aa15.13■□□□□ 0.01
SSBP4-204ENST00000597724 SRYQ05066 204 aa15.13■□□□□ 0.01
SSBP4-204ENST00000597724 FUT5Q11128 374 aa15.13■□□□□ 0.01
SSBP4-204ENST00000597724 ZNF141Q15928 474 aa15.13■□□□□ 0.01
SSBP4-204ENST00000597724 TMEM44Q2T9K0 475 aa15.13■□□□□ 0.01
SSBP4-204ENST00000597724 HSP90B2PQ58FF3 399 aa15.13■□□□□ 0.01
SSBP4-204ENST00000597724 ARSKQ6UWY0 536 aa15.13■□□□□ 0.01
SSBP4-204ENST00000597724 OLIG3Q7RTU3 272 aa15.13■□□□□ 0.01
SSBP4-204ENST00000597724 ADGRE4PQ86SQ3 457 aa15.13■□□□□ 0.01
SSBP4-204ENST00000597724 RNF130Q86XS8 419 aa15.13■□□□□ 0.01
SSBP4-204ENST00000597724 FUNDC1Q8IVP5 155 aa15.13■□□□□ 0.01
SSBP4-204ENST00000597724 ARFGAP2Q8N6H7 521 aa15.13■□□□□ 0.01
SSBP4-204ENST00000597724 TNIP2Q8NFZ5 429 aa15.13■□□□□ 0.01
SSBP4-204ENST00000597724 RFWD2Q8NHY2 731 aa15.13■□□□□ 0.01
SSBP4-204ENST00000597724 ZFP90Q8TF47 636 aa15.13■□□□□ 0.01
SSBP4-204ENST00000597724 GTF2H4Q92759 462 aa15.13■□□□□ 0.01
SSBP4-204ENST00000597724 THOC1Q96FV9 657 aaKnown RBP15.13■□□□□ 0.01
SSBP4-204ENST00000597724 ITCHQ96J02 903 aa15.13■□□□□ 0.01
SSBP4-204ENST00000597724 TRIB1Q96RU8 372 aa15.13■□□□□ 0.01
SSBP4-204ENST00000597724 TUBA1CQ9BQE3 449 aa15.13■□□□□ 0.01
SSBP4-204ENST00000597724 PIGQQ9BRB3 760 aa15.13■□□□□ 0.01
SSBP4-204ENST00000597724 ZNF350Q9GZX5 532 aa15.13■□□□□ 0.01
SSBP4-204ENST00000597724 SAP130Q9H0E3 1048 aa15.13■□□□□ 0.01
SSBP4-204ENST00000597724 CALHM2Q9HA72 323 aa15.13■□□□□ 0.01
SSBP4-204ENST00000597724 DCHS2Q6V1P9 2916 aa15.13■□□□□ 0.01
SSBP4-204ENST00000597724 MAST4O15021 2626 aa15.12■□□□□ 0.01
SSBP4-204ENST00000597724 A0A087WZY1 265 aa15.12■□□□□ 0.01
SSBP4-204ENST00000597724 PRAMEF27A3QJZ7 478 aa15.12■□□□□ 0.01
SSBP4-204ENST00000597724 H3BNH8 94 aa15.12■□□□□ 0.01
SSBP4-204ENST00000597724 OIP5O43482 229 aa15.12■□□□□ 0.01
SSBP4-204ENST00000597724 HCRTR2O43614 444 aa15.12■□□□□ 0.01
SSBP4-204ENST00000597724 PEPDP12955 493 aa15.12■□□□□ 0.01
SSBP4-204ENST00000597724 TIMP3P35625 211 aa15.12■□□□□ 0.01
SSBP4-204ENST00000597724 RNF144AP50876 292 aaPredicted RBP15.12■□□□□ 0.01
SSBP4-204ENST00000597724 ATP4BP51164 291 aa15.12■□□□□ 0.01
SSBP4-204ENST00000597724 TXNL4AP83876 142 aaKnown RBP15.12■□□□□ 0.01
SSBP4-204ENST00000597724 RCAN2Q14206 197 aa15.12■□□□□ 0.01
SSBP4-204ENST00000597724 GPR68Q15743 365 aa15.12■□□□□ 0.01
SSBP4-204ENST00000597724 PDZK1Q5T2W1 519 aa15.12■□□□□ 0.01
SSBP4-204ENST00000597724 BLOC1S3Q6QNY0 202 aa15.12■□□□□ 0.01
SSBP4-204ENST00000597724 ZNF614Q8N883 585 aa15.12■□□□□ 0.01
SSBP4-204ENST00000597724 OR5M1Q8NGP8 315 aa15.12■□□□□ 0.01
SSBP4-204ENST00000597724 B4GALNT2Q8NHY0 566 aa15.12■□□□□ 0.01
SSBP4-204ENST00000597724 ROPN1LQ96C74 230 aa15.12■□□□□ 0.01
SSBP4-204ENST00000597724 UCN2Q96RP3 112 aa15.12■□□□□ 0.01
SSBP4-204ENST00000597724 KLHDC3Q9BQ90 382 aa15.12■□□□□ 0.01
SSBP4-204ENST00000597724 UCK2Q9BZX2 261 aa15.12■□□□□ 0.01
SSBP4-204ENST00000597724 NPHS2Q9NP85 383 aa15.12■□□□□ 0.01
SSBP4-204ENST00000597724 MED4Q9NPJ6 270 aa15.12■□□□□ 0.01
SSBP4-204ENST00000597724 SLC52A3Q9NQ40 469 aa15.12■□□□□ 0.01
SSBP4-204ENST00000597724 POLE3Q9NRF9 147 aa15.12■□□□□ 0.01
SSBP4-204ENST00000597724 TMEM45AQ9NWC5 275 aa15.12■□□□□ 0.01
SSBP4-204ENST00000597724 DCTN4Q9UJW0 460 aa15.12■□□□□ 0.01
SSBP4-204ENST00000597724 VDAC3Q9Y277 283 aa15.12■□□□□ 0.01
SSBP4-204ENST00000597724 KIAA1549Q9HCM3 1950 aa15.12■□□□□ 0.01
SSBP4-204ENST00000597724 MBD3L4A6NDZ8 208 aaPredicted RBP15.11■□□□□ 0.01
SSBP4-204ENST00000597724 MBD3L3A6NE82 208 aaPredicted RBP15.11■□□□□ 0.01
SSBP4-204ENST00000597724 MBD3L5A6NJ08 208 aaPredicted RBP15.11■□□□□ 0.01
SSBP4-204ENST00000597724 HSPB2A8KAH6 182 aa15.11■□□□□ 0.01
SSBP4-204ENST00000597724 H0Y3Z8 333 aa15.11■□□□□ 0.01
SSBP4-204ENST00000597724 C19orf84I3L1E1 186 aa15.11■□□□□ 0.01
SSBP4-204ENST00000597724 GTPBP1O00178 669 aaKnown RBP15.11■□□□□ 0.01
SSBP4-204ENST00000597724 ATP8B1O43520 1251 aa15.11■□□□□ 0.01
SSBP4-204ENST00000597724 UGT2B17O75795 530 aa15.11■□□□□ 0.01
SSBP4-204ENST00000597724 ANP32DO95626 131 aa15.11■□□□□ 0.01
SSBP4-204ENST00000597724 KRT75O95678 551 aa15.11■□□□□ 0.01
SSBP4-204ENST00000597724 POU3F2P20265 443 aaPredicted RBP15.11■□□□□ 0.01
SSBP4-204ENST00000597724 MAGEA8P43361 318 aa15.11■□□□□ 0.01
SSBP4-204ENST00000597724 ANXA11P50995 505 aaKnown RBP15.11■□□□□ 0.01
SSBP4-204ENST00000597724 P2RX1P51575 399 aa15.11■□□□□ 0.01
SSBP4-204ENST00000597724 MVDP53602 400 aa15.11■□□□□ 0.01
SSBP4-204ENST00000597724 HSPB2Q16082 182 aa15.11■□□□□ 0.01
SSBP4-204ENST00000597724 COX20Q5RI15 118 aa15.11■□□□□ 0.01
SSBP4-204ENST00000597724 TYW3Q6IPR3 259 aaKnown RBP15.11■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms