RNA–Protein interactions for RNA: ENST00000597453.1

TGFB1-202, Transcript of transforming growth factor beta 1, humanhuman

TSL 1 (best)

Gene TGFB1, Length 392 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFB1-202ENST00000597453 CRHP06850 196 aa13.65□□□□□ -0.22
TGFB1-202ENST00000597453 LBPP18428 481 aa13.65□□□□□ -0.22
TGFB1-202ENST00000597453 CLDN8P56748 225 aa13.65□□□□□ -0.22
TGFB1-202ENST00000597453 EEF1A1P68104 462 aaKnown RBP13.65□□□□□ -0.22
TGFB1-202ENST00000597453 SIRPAP78324 504 aa13.65□□□□□ -0.22
TGFB1-202ENST00000597453 FAM27E3Q08E93 113 aa13.65□□□□□ -0.22
TGFB1-202ENST00000597453 GANABQ14697 944 aaKnown RBP13.65□□□□□ -0.22
TGFB1-202ENST00000597453 GRAMD1BQ3KR37 738 aa13.65□□□□□ -0.22
TGFB1-202ENST00000597453 EEF1A1P5Q5VTE0 462 aa13.65□□□□□ -0.22
TGFB1-202ENST00000597453 OR2A2Q6IF42 318 aa13.65□□□□□ -0.22
TGFB1-202ENST00000597453 ZNF474Q6S9Z5 364 aaPredicted RBP13.65□□□□□ -0.22
TGFB1-202ENST00000597453 CHMP1BQ7LBR1 199 aa13.65□□□□□ -0.22
TGFB1-202ENST00000597453 BTLAQ7Z6A9 289 aa13.65□□□□□ -0.22
TGFB1-202ENST00000597453 WDR75Q8IWA0 830 aaKnown RBP13.65□□□□□ -0.22
TGFB1-202ENST00000597453 OR7A2PQ8NGA2 310 aa13.65□□□□□ -0.22
TGFB1-202ENST00000597453 PIWIL2Q8TC59 973 aaKnown RBP13.65□□□□□ -0.22
TGFB1-202ENST00000597453 DYDC1Q8WWB3 177 aa13.65□□□□□ -0.22
TGFB1-202ENST00000597453 HOXB13Q92826 284 aaPredicted RBP13.65□□□□□ -0.22
TGFB1-202ENST00000597453 ZNF845Q96IR2 970 aaPredicted RBP13.65□□□□□ -0.22
TGFB1-202ENST00000597453 PINK1Q9BXM7 581 aa13.65□□□□□ -0.22
TGFB1-202ENST00000597453 OPN3Q9H1Y3 402 aaPredicted RBP13.65□□□□□ -0.22
TGFB1-202ENST00000597453 PTGES2Q9H7Z7 377 aa13.65□□□□□ -0.22
TGFB1-202ENST00000597453 INTS9Q9NV88 658 aaKnown RBP13.65□□□□□ -0.22
TGFB1-202ENST00000597453 ATAD3AQ9NVI7 634 aa13.65□□□□□ -0.22
TGFB1-202ENST00000597453 SIAH2O43255 324 aa13.64□□□□□ -0.23
TGFB1-202ENST00000597453 ANGPTL1O95841 491 aa13.64□□□□□ -0.23
TGFB1-202ENST00000597453 KITP10721 976 aa13.64□□□□□ -0.23
TGFB1-202ENST00000597453 MAP3K8P41279 467 aa13.64□□□□□ -0.23
TGFB1-202ENST00000597453 KIR2DL2P43627 348 aaPredicted RBP13.64□□□□□ -0.23
TGFB1-202ENST00000597453 PSMD4P55036 377 aaKnown RBP13.64□□□□□ -0.23
TGFB1-202ENST00000597453 MLC1Q15049 377 aa13.64□□□□□ -0.23
TGFB1-202ENST00000597453 GALNT10Q86SR1 603 aa13.64□□□□□ -0.23
TGFB1-202ENST00000597453 NATD1Q8N6N6 113 aa13.64□□□□□ -0.23
TGFB1-202ENST00000597453 WFDC11Q8NEX6 87 aa13.64□□□□□ -0.23
TGFB1-202ENST00000597453 FBXO30Q8TB52 745 aa13.64□□□□□ -0.23
TGFB1-202ENST00000597453 FNDC9Q8TBE3 224 aa13.64□□□□□ -0.23
TGFB1-202ENST00000597453 SMPDL3BQ92485 455 aa13.64□□□□□ -0.23
TGFB1-202ENST00000597453 COQ8BQ96D53 544 aa13.64□□□□□ -0.23
TGFB1-202ENST00000597453 MAELQ96JY0 434 aaKnown RBP13.64□□□□□ -0.23
TGFB1-202ENST00000597453 PRPF18Q99633 342 aaKnown RBP13.64□□□□□ -0.23
TGFB1-202ENST00000597453 TBL1XR1Q9BZK7 514 aa13.64□□□□□ -0.23
TGFB1-202ENST00000597453 GSX1Q9H4S2 264 aaPredicted RBP13.64□□□□□ -0.23
TGFB1-202ENST00000597453 RNF122Q9H9V4 155 aa13.64□□□□□ -0.23
TGFB1-202ENST00000597453 KLHL28Q9NXS3 571 aa13.64□□□□□ -0.23
TGFB1-202ENST00000597453 MRTO4Q9UKD2 239 aaKnown RBP13.64□□□□□ -0.23
TGFB1-202ENST00000597453 GIMAP1-GIMAP5A0A087WTJ2 511 aa13.63□□□□□ -0.23
TGFB1-202ENST00000597453 IGLV3-32A0A0A0MS00 114 aa13.63□□□□□ -0.23
TGFB1-202ENST00000597453 TNFRSF21O75509 655 aa13.63□□□□□ -0.23
TGFB1-202ENST00000597453 NKX2-2O95096 273 aa13.63□□□□□ -0.23
TGFB1-202ENST00000597453 KCNH1O95259 989 aa13.63□□□□□ -0.23
TGFB1-202ENST00000597453 CGAP01215 116 aa13.63□□□□□ -0.23
TGFB1-202ENST00000597453 LAMP1P11279 417 aa13.63□□□□□ -0.23
TGFB1-202ENST00000597453 CD53P19397 219 aa13.63□□□□□ -0.23
TGFB1-202ENST00000597453 EPHA3P29320 983 aa13.63□□□□□ -0.23
TGFB1-202ENST00000597453 CCKARP32238 428 aa13.63□□□□□ -0.23
TGFB1-202ENST00000597453 GPC1P35052 558 aa13.63□□□□□ -0.23
TGFB1-202ENST00000597453 CLK3P49761 638 aaKnown RBP13.63□□□□□ -0.23
TGFB1-202ENST00000597453 PRKAG1P54619 331 aa13.63□□□□□ -0.23
TGFB1-202ENST00000597453 MANFP55145 182 aaKnown RBP13.63□□□□□ -0.23
TGFB1-202ENST00000597453 EEFSECP57772 596 aaKnown RBP13.63□□□□□ -0.23
TGFB1-202ENST00000597453 PRR5P85299 388 aa13.63□□□□□ -0.23
TGFB1-202ENST00000597453 PON3Q15166 354 aa13.63□□□□□ -0.23
TGFB1-202ENST00000597453 TMEM44Q2T9K0 475 aa13.63□□□□□ -0.23
TGFB1-202ENST00000597453 CPTPQ5TA50 214 aa13.63□□□□□ -0.23
TGFB1-202ENST00000597453 MAVSQ7Z434 540 aa13.63□□□□□ -0.23
TGFB1-202ENST00000597453 SPATA19Q7Z5L4 167 aa13.63□□□□□ -0.23
TGFB1-202ENST00000597453 GGNQ86UU5 652 aa13.63□□□□□ -0.23
TGFB1-202ENST00000597453 KRTAP1-3Q8IUG1 177 aa13.63□□□□□ -0.23
TGFB1-202ENST00000597453 KRTCAP2Q8N6L1 136 aa13.63□□□□□ -0.23
TGFB1-202ENST00000597453 GPR151Q8TDV0 419 aa13.63□□□□□ -0.23
TGFB1-202ENST00000597453 GIMAP5Q96F15 307 aa13.63□□□□□ -0.23
TGFB1-202ENST00000597453 WFIKKN1Q96NZ8 548 aa13.63□□□□□ -0.23
TGFB1-202ENST00000597453 PIGQQ9BRB3 760 aa13.63□□□□□ -0.23
TGFB1-202ENST00000597453 BHLHE41Q9C0J9 482 aaPredicted RBP13.63□□□□□ -0.23
TGFB1-202ENST00000597453 WDR55Q9H6Y2 383 aaPredicted RBP13.63□□□□□ -0.23
TGFB1-202ENST00000597453 C3orf14Q9HBI5 128 aa13.63□□□□□ -0.23
TGFB1-202ENST00000597453 C6orf203Q9P0P8 240 aaPredicted RBP13.63□□□□□ -0.23
TGFB1-202ENST00000597453 NDRG3Q9UGV2 375 aa13.63□□□□□ -0.23
TGFB1-202ENST00000597453 ZNF175Q9Y473 711 aa13.63□□□□□ -0.23
TGFB1-202ENST00000597453 ARID1AO14497 2285 aa13.63□□□□□ -0.23
TGFB1-202ENST00000597453 HEATR5AQ86XA9 2040 aa13.63□□□□□ -0.23
TGFB1-202ENST00000597453 ROS1P08922 2347 aa13.62□□□□□ -0.23
TGFB1-202ENST00000597453 A0A1W2PRB8 838 aa13.62□□□□□ -0.23
TGFB1-202ENST00000597453 TTC36A6NLP5 189 aa13.62□□□□□ -0.23
TGFB1-202ENST00000597453 DEFB108AA8MXU0 73 aa13.62□□□□□ -0.23
TGFB1-202ENST00000597453 LINC01387J3KSC0 135 aa13.62□□□□□ -0.23
TGFB1-202ENST00000597453 CASKO14936 926 aa13.62□□□□□ -0.23
TGFB1-202ENST00000597453 ANKRD28O15084 1053 aa13.62□□□□□ -0.23
TGFB1-202ENST00000597453 ALDOCP09972 364 aaKnown RBP13.62□□□□□ -0.23
TGFB1-202ENST00000597453 ACP2P11117 423 aa13.62□□□□□ -0.23
TGFB1-202ENST00000597453 HOXB4P17483 251 aaPredicted RBP13.62□□□□□ -0.23
TGFB1-202ENST00000597453 EFNA1P20827 205 aaPredicted RBP13.62□□□□□ -0.23
TGFB1-202ENST00000597453 CD79BP40259 229 aa13.62□□□□□ -0.23
TGFB1-202ENST00000597453 C17orf67Q0P5P2 114 aa13.62□□□□□ -0.23
TGFB1-202ENST00000597453 GLYR1Q49A26 553 aaPredicted RBP13.62□□□□□ -0.23
TGFB1-202ENST00000597453 FIGNL1Q6PIW4 674 aa13.62□□□□□ -0.23
TGFB1-202ENST00000597453 SZRD1Q7Z422 152 aa13.62□□□□□ -0.23
TGFB1-202ENST00000597453 ZAR1Q86SH2 424 aa13.62□□□□□ -0.23
TGFB1-202ENST00000597453 METTL25Q8N6Q8 603 aa13.62□□□□□ -0.23
TGFB1-202ENST00000597453 GATSQ8NAP1 163 aa13.62□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms