RNA–Protein interactions for RNA: ENST00000597396.5

SHKBP1-214, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 1,019 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-214ENST00000597396 SLC6A5Q9Y345 797 aa17.88■□□□□ 0.45
SHKBP1-214ENST00000597396 ARHGAP21Q5T5U3 1957 aa17.88■□□□□ 0.45
SHKBP1-214ENST00000597396 PHF3Q92576 2039 aaKnown RBP17.88■□□□□ 0.45
SHKBP1-214ENST00000597396 IGLV3-32A0A0A0MS00 114 aa17.87■□□□□ 0.45
SHKBP1-214ENST00000597396 TRBV5-3A0A0A0MS03 114 aa17.87■□□□□ 0.45
SHKBP1-214ENST00000597396 A0A1B0GUH1 482 aa17.87■□□□□ 0.45
SHKBP1-214ENST00000597396 BBIP1A8MTZ0 92 aa17.87■□□□□ 0.45
SHKBP1-214ENST00000597396 BCKDKO14874 412 aa17.87■□□□□ 0.45
SHKBP1-214ENST00000597396 HCRTR2O43614 444 aa17.87■□□□□ 0.45
SHKBP1-214ENST00000597396 TNFRSF21O75509 655 aa17.87■□□□□ 0.45
SHKBP1-214ENST00000597396 BCHEP06276 602 aa17.87■□□□□ 0.45
SHKBP1-214ENST00000597396 ENDOUP21128 410 aaKnown RBP17.87■□□□□ 0.45
SHKBP1-214ENST00000597396 MSX1P28360 303 aa17.87■□□□□ 0.45
SHKBP1-214ENST00000597396 CA7P43166 264 aa17.87■□□□□ 0.45
SHKBP1-214ENST00000597396 CHRNEQ04844 493 aa17.87■□□□□ 0.45
SHKBP1-214ENST00000597396 GANABQ14697 944 aaKnown RBP17.87■□□□□ 0.45
SHKBP1-214ENST00000597396 CD226Q15762 336 aa17.87■□□□□ 0.45
SHKBP1-214ENST00000597396 ZNF141Q15928 474 aa17.87■□□□□ 0.45
SHKBP1-214ENST00000597396 C4orf17Q53FE4 359 aa17.87■□□□□ 0.45
SHKBP1-214ENST00000597396 MTDHQ86UE4 582 aaKnown RBP17.87■□□□□ 0.45
SHKBP1-214ENST00000597396 IFNEQ86WN2 208 aa17.87■□□□□ 0.45
SHKBP1-214ENST00000597396 CGREF1Q99674 301 aa17.87■□□□□ 0.45
SHKBP1-214ENST00000597396 SAP130Q9H0E3 1048 aa17.87■□□□□ 0.45
SHKBP1-214ENST00000597396 CALML5Q9NZT1 146 aa17.87■□□□□ 0.45
SHKBP1-214ENST00000597396 TNFRSF10DQ9UBN6 386 aa17.87■□□□□ 0.45
SHKBP1-214ENST00000597396 SLC5A6Q9Y289 635 aa17.87■□□□□ 0.45
SHKBP1-214ENST00000597396 MRPS18CQ9Y3D5 142 aaKnown RBP17.87■□□□□ 0.45
SHKBP1-214ENST00000597396 LOC100653049A0A140TA62 436 aa17.86■□□□□ 0.45
SHKBP1-214ENST00000597396 SERINC4A6NH21 518 aa17.86■□□□□ 0.45
SHKBP1-214ENST00000597396 B4DXG7 233 aa17.86■□□□□ 0.45
SHKBP1-214ENST00000597396 FAM47E-STBD1D6RA91 191 aa17.86■□□□□ 0.45
SHKBP1-214ENST00000597396 FBP2O00757 339 aa17.86■□□□□ 0.45
SHKBP1-214ENST00000597396 MRASO14807 208 aa17.86■□□□□ 0.45
SHKBP1-214ENST00000597396 LRRTM2O43300 516 aa17.86■□□□□ 0.45
SHKBP1-214ENST00000597396 UGT2B17O75795 530 aa17.86■□□□□ 0.45
SHKBP1-214ENST00000597396 KRT34O76011 436 aa17.86■□□□□ 0.45
SHKBP1-214ENST00000597396 AGFG2O95081 481 aa17.86■□□□□ 0.45
SHKBP1-214ENST00000597396 CHRM4P08173 479 aa17.86■□□□□ 0.45
SHKBP1-214ENST00000597396 GP1BBP13224 206 aa17.86■□□□□ 0.45
SHKBP1-214ENST00000597396 HK1P19367 917 aa17.86■□□□□ 0.45
SHKBP1-214ENST00000597396 CRISP3P54108 245 aa17.86■□□□□ 0.45
SHKBP1-214ENST00000597396 CYLC2Q14093 348 aaPredicted RBP17.86■□□□□ 0.45
SHKBP1-214ENST00000597396 GNA13Q14344 377 aa17.86■□□□□ 0.45
SHKBP1-214ENST00000597396 RUNDC3AQ59EK9 446 aa17.86■□□□□ 0.45
SHKBP1-214ENST00000597396 COQ5Q5HYK3 327 aa17.86■□□□□ 0.45
SHKBP1-214ENST00000597396 WLSQ5T9L3 541 aa17.86■□□□□ 0.45
SHKBP1-214ENST00000597396 REP15Q6BDI9 236 aa17.86■□□□□ 0.45
SHKBP1-214ENST00000597396 FJX1Q86VR8 437 aa17.86■□□□□ 0.45
SHKBP1-214ENST00000597396 B4GALNT2Q8NHY0 566 aa17.86■□□□□ 0.45
SHKBP1-214ENST00000597396 OIT3Q8WWZ8 545 aa17.86■□□□□ 0.45
SHKBP1-214ENST00000597396 C1GALT1C1Q96EU7 318 aa17.86■□□□□ 0.45
SHKBP1-214ENST00000597396 CPPED1Q9BRF8 314 aaPredicted RBP17.86■□□□□ 0.45
SHKBP1-214ENST00000597396 SLC38A1Q9H2H9 487 aa17.86■□□□□ 0.45
SHKBP1-214ENST00000597396 RPH3AQ9Y2J0 694 aaPredicted RBP17.86■□□□□ 0.45
SHKBP1-214ENST00000597396 CENPVL1A0A0U1RR11 272 aa17.85■□□□□ 0.45
SHKBP1-214ENST00000597396 CCL21O00585 134 aa17.85■□□□□ 0.45
SHKBP1-214ENST00000597396 UBL4AP11441 157 aa17.85■□□□□ 0.45
SHKBP1-214ENST00000597396 ESRRAP11474 423 aaPredicted RBP17.85■□□□□ 0.45
SHKBP1-214ENST00000597396 ZNF117Q03924 483 aa17.85■□□□□ 0.45
SHKBP1-214ENST00000597396 TRMT5Q32P41 509 aaKnown RBP17.85■□□□□ 0.45
SHKBP1-214ENST00000597396 GCNT6Q5T4J0 391 aa17.85■□□□□ 0.45
SHKBP1-214ENST00000597396 RAET1LQ5VY80 246 aa17.85■□□□□ 0.45
SHKBP1-214ENST00000597396 HMGN2P46Q86SG4 172 aa17.85■□□□□ 0.45
SHKBP1-214ENST00000597396 DOLPP1Q86YN1 238 aa17.85■□□□□ 0.45
SHKBP1-214ENST00000597396 EID3Q8N140 333 aa17.85■□□□□ 0.45
SHKBP1-214ENST00000597396 TMCO5AQ8N6Q1 288 aa17.85■□□□□ 0.45
SHKBP1-214ENST00000597396 POU5F2Q8N7G0 328 aa17.85■□□□□ 0.45
SHKBP1-214ENST00000597396 PCYOX1LQ8NBM8 494 aa17.85■□□□□ 0.45
SHKBP1-214ENST00000597396 OR5M9Q8NGP3 310 aa17.85■□□□□ 0.45
SHKBP1-214ENST00000597396 ABTB1Q969K4 478 aaPredicted RBP17.85■□□□□ 0.45
SHKBP1-214ENST00000597396 TMEM19Q96HH6 336 aa17.85■□□□□ 0.45
SHKBP1-214ENST00000597396 SFXN2Q96NB2 322 aa17.85■□□□□ 0.45
SHKBP1-214ENST00000597396 ANKRD27Q96NW4 1050 aa17.85■□□□□ 0.45
SHKBP1-214ENST00000597396 THUMPD3Q9BV44 507 aaKnown RBP17.85■□□□□ 0.45
SHKBP1-214ENST00000597396 RUBCNLQ9H714 662 aa17.85■□□□□ 0.45
SHKBP1-214ENST00000597396 KCNE5Q9UJ90 142 aa17.85■□□□□ 0.45
SHKBP1-214ENST00000597396 CARD8Q9Y2G2 431 aa17.85■□□□□ 0.45
SHKBP1-214ENST00000597396 GMEB1Q9Y692 573 aa17.85■□□□□ 0.45
SHKBP1-214ENST00000597396 PCNX1Q96RV3 2341 aa17.84■□□□□ 0.45
SHKBP1-214ENST00000597396 C5orf58C9J3I9 102 aa17.84■□□□□ 0.45
SHKBP1-214ENST00000597396 ZNF264O43296 627 aa17.84■□□□□ 0.45
SHKBP1-214ENST00000597396 SEMA7AO75326 666 aa17.84■□□□□ 0.45
SHKBP1-214ENST00000597396 NUDT14O95848 222 aa17.84■□□□□ 0.45
SHKBP1-214ENST00000597396 CSTAP01040 98 aa17.84■□□□□ 0.45
SHKBP1-214ENST00000597396 NUDT7P0C024 238 aa17.84■□□□□ 0.45
SHKBP1-214ENST00000597396 TFPTP0C1Z6 253 aa17.84■□□□□ 0.45
SHKBP1-214ENST00000597396 BMP2P12643 396 aa17.84■□□□□ 0.45
SHKBP1-214ENST00000597396 ZNF41P51814 821 aaPredicted RBP17.84■□□□□ 0.45
SHKBP1-214ENST00000597396 PER3P56645 1201 aa17.84■□□□□ 0.45
SHKBP1-214ENST00000597396 CRYZQ08257 329 aaKnown RBP17.84■□□□□ 0.45
SHKBP1-214ENST00000597396 CAPRIN1Q14444 709 aaKnown RBP17.84■□□□□ 0.45
SHKBP1-214ENST00000597396 FGFBP1Q14512 234 aa17.84■□□□□ 0.45
SHKBP1-214ENST00000597396 MAPK14Q16539 360 aa17.84■□□□□ 0.45
SHKBP1-214ENST00000597396 NDUFAF6Q330K2 333 aa17.84■□□□□ 0.45
SHKBP1-214ENST00000597396 GXYLT1Q4G148 440 aa17.84■□□□□ 0.45
SHKBP1-214ENST00000597396 RP9Q8TA86 221 aaKnown RBP17.84■□□□□ 0.45
SHKBP1-214ENST00000597396 SLC38A5Q8WUX1 472 aa17.84■□□□□ 0.45
SHKBP1-214ENST00000597396 RELTQ969Z4 430 aa17.84■□□□□ 0.45
SHKBP1-214ENST00000597396 CCDC106Q9BWC9 280 aa17.84■□□□□ 0.45
SHKBP1-214ENST00000597396 UGT2B28Q9BY64 529 aa17.84■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms