RNA–Protein interactions for RNA: ENST00000596708.1

CHMP2A-202, Transcript of charged multivesicular body protein 2A, humanhuman

TSL 3

Gene CHMP2A, Length 687 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2A-202ENST00000596708 SFTPDP35247 375 aa9.43□□□□□ -0.9
CHMP2A-202ENST00000596708 CARD18P57730 90 aa9.43□□□□□ -0.9
CHMP2A-202ENST00000596708 NAA20P61599 178 aa9.43□□□□□ -0.9
CHMP2A-202ENST00000596708 RPS4XP62701 263 aaKnown RBP9.43□□□□□ -0.9
CHMP2A-202ENST00000596708 VEZF1Q14119 521 aa9.43□□□□□ -0.9
CHMP2A-202ENST00000596708 TSC22D1Q15714 1073 aa9.43□□□□□ -0.9
CHMP2A-202ENST00000596708 CLEC12BQ2HXU8 276 aa9.43□□□□□ -0.9
CHMP2A-202ENST00000596708 TMEM201Q5SNT2 666 aa9.43□□□□□ -0.9
CHMP2A-202ENST00000596708 ZYG11AQ6WRX3 759 aa9.43□□□□□ -0.9
CHMP2A-202ENST00000596708 TRMT10CQ7L0Y3 403 aaKnown RBP9.43□□□□□ -0.9
CHMP2A-202ENST00000596708 CCDC63Q8NA47 563 aa9.43□□□□□ -0.9
CHMP2A-202ENST00000596708 STEAP2Q8NFT2 490 aa9.43□□□□□ -0.9
CHMP2A-202ENST00000596708 OR6Y1Q8NGX8 325 aa9.43□□□□□ -0.9
CHMP2A-202ENST00000596708 B4GALNT2Q8NHY0 566 aa9.43□□□□□ -0.9
CHMP2A-202ENST00000596708 RAB3IL1Q8TBN0 382 aa9.43□□□□□ -0.9
CHMP2A-202ENST00000596708 ACTRT2Q8TDY3 377 aa9.43□□□□□ -0.9
CHMP2A-202ENST00000596708 IGFBPL1Q8WX77 278 aa9.43□□□□□ -0.9
CHMP2A-202ENST00000596708 S100PBPQ96BU1 408 aa9.43□□□□□ -0.9
CHMP2A-202ENST00000596708 PPCDCQ96CD2 204 aa9.43□□□□□ -0.9
CHMP2A-202ENST00000596708 ZBED6CLQ96FA7 236 aaPredicted RBP9.43□□□□□ -0.9
CHMP2A-202ENST00000596708 CHMP6Q96FZ7 201 aa9.43□□□□□ -0.9
CHMP2A-202ENST00000596708 TMEM204Q9BSN7 226 aa9.43□□□□□ -0.9
CHMP2A-202ENST00000596708 OR10A4Q9H209 315 aa9.43□□□□□ -0.9
CHMP2A-202ENST00000596708 FBXO34Q9NWN3 711 aa9.43□□□□□ -0.9
CHMP2A-202ENST00000596708 PSMC3IPQ9P2W1 217 aaPredicted RBP9.43□□□□□ -0.9
CHMP2A-202ENST00000596708 ADAM21Q9UKJ8 722 aa9.43□□□□□ -0.9
CHMP2A-202ENST00000596708 FIS1Q9Y3D6 152 aa9.43□□□□□ -0.9
CHMP2A-202ENST00000596708 A0A1W2PPM1 405 aa9.42□□□□□ -0.9
CHMP2A-202ENST00000596708 G3V2L1 256 aa9.42□□□□□ -0.9
CHMP2A-202ENST00000596708 SLC28A1O00337 649 aa9.42□□□□□ -0.9
CHMP2A-202ENST00000596708 CLOCKO15516 846 aa9.42□□□□□ -0.9
CHMP2A-202ENST00000596708 RIPK2O43353 540 aa9.42□□□□□ -0.9
CHMP2A-202ENST00000596708 RGS14O43566 566 aa9.42□□□□□ -0.9
CHMP2A-202ENST00000596708 GLRA3O75311 464 aa9.42□□□□□ -0.9
CHMP2A-202ENST00000596708 CRLF1O75462 422 aa9.42□□□□□ -0.9
CHMP2A-202ENST00000596708 KCNK2O95069 426 aa9.42□□□□□ -0.9
CHMP2A-202ENST00000596708 NUDT14O95848 222 aa9.42□□□□□ -0.9
CHMP2A-202ENST00000596708 CD3EP07766 207 aa9.42□□□□□ -0.9
CHMP2A-202ENST00000596708 NGFRP08138 427 aa9.42□□□□□ -0.9
CHMP2A-202ENST00000596708 ALOX5P09917 674 aa9.42□□□□□ -0.9
CHMP2A-202ENST00000596708 UROSP10746 265 aa9.42□□□□□ -0.9
CHMP2A-202ENST00000596708 ACP2P11117 423 aa9.42□□□□□ -0.9
CHMP2A-202ENST00000596708 PSMB1P20618 241 aaKnown RBP9.42□□□□□ -0.9
CHMP2A-202ENST00000596708 IL32P24001 234 aa9.42□□□□□ -0.9
CHMP2A-202ENST00000596708 AGTR1P30556 359 aa9.42□□□□□ -0.9
CHMP2A-202ENST00000596708 IDUAP35475 653 aa9.42□□□□□ -0.9
CHMP2A-202ENST00000596708 MAP3K8P41279 467 aa9.42□□□□□ -0.9
CHMP2A-202ENST00000596708 CAPRIN1Q14444 709 aaKnown RBP9.42□□□□□ -0.9
CHMP2A-202ENST00000596708 KIAA0040Q15053 153 aa9.42□□□□□ -0.9
CHMP2A-202ENST00000596708 DUSP5Q16690 384 aa9.42□□□□□ -0.9
CHMP2A-202ENST00000596708 PLPPR5Q32ZL2 321 aa9.42□□□□□ -0.9
CHMP2A-202ENST00000596708 ZNF385BQ569K4 471 aa9.42□□□□□ -0.9
CHMP2A-202ENST00000596708 CCNJQ5T5M9 372 aa9.42□□□□□ -0.9
CHMP2A-202ENST00000596708 CLEC6AQ6EIG7 209 aa9.42□□□□□ -0.9
CHMP2A-202ENST00000596708 FRMD7Q6ZUT3 714 aa9.42□□□□□ -0.9
CHMP2A-202ENST00000596708 CXXC5Q7LFL8 322 aaKnown RBP9.42□□□□□ -0.9
CHMP2A-202ENST00000596708 ZAR1Q86SH2 424 aa9.42□□□□□ -0.9
CHMP2A-202ENST00000596708 TRABD2AQ86V40 505 aa9.42□□□□□ -0.9
CHMP2A-202ENST00000596708 MISPQ8IVT2 679 aa9.42□□□□□ -0.9
CHMP2A-202ENST00000596708 LILRA2Q8N149 483 aa9.42□□□□□ -0.9
CHMP2A-202ENST00000596708 COX18Q8N8Q8 333 aa9.42□□□□□ -0.9
CHMP2A-202ENST00000596708 SLC16A11Q8NCK7 471 aa9.42□□□□□ -0.9
CHMP2A-202ENST00000596708 MAPK1IP1LQ8NDC0 245 aa9.42□□□□□ -0.9
CHMP2A-202ENST00000596708 POC1BQ8TC44 478 aa9.42□□□□□ -0.9
CHMP2A-202ENST00000596708 FAM110BQ8TC76 370 aa9.42□□□□□ -0.9
CHMP2A-202ENST00000596708 PHOSPHO1Q8TCT1 267 aa9.42□□□□□ -0.9
CHMP2A-202ENST00000596708 JADE3Q92613 823 aa9.42□□□□□ -0.9
CHMP2A-202ENST00000596708 FBXW5Q969U6 566 aa9.42□□□□□ -0.9
CHMP2A-202ENST00000596708 GTPBP3Q969Y2 492 aaKnown RBP9.42□□□□□ -0.9
CHMP2A-202ENST00000596708 OTUB1Q96FW1 271 aaPredicted RBP9.42□□□□□ -0.9
CHMP2A-202ENST00000596708 C16orf58Q96GQ5 468 aa9.42□□□□□ -0.9
CHMP2A-202ENST00000596708 METTL2AQ96IZ6 378 aaKnown RBP9.42□□□□□ -0.9
CHMP2A-202ENST00000596708 KLHL15Q96M94 604 aa9.42□□□□□ -0.9
CHMP2A-202ENST00000596708 MS4A4EQ96PG1 132 aa9.42□□□□□ -0.9
CHMP2A-202ENST00000596708 TSSK3Q96PN8 268 aa9.42□□□□□ -0.9
CHMP2A-202ENST00000596708 REPIN1Q9BWE0 567 aaKnown RBP9.42□□□□□ -0.9
CHMP2A-202ENST00000596708 HDHD5Q9BXW7 423 aa9.42□□□□□ -0.9
CHMP2A-202ENST00000596708 REEP4Q9H6H4 257 aa9.42□□□□□ -0.9
CHMP2A-202ENST00000596708 LRTM1Q9HBL6 345 aa9.42□□□□□ -0.9
CHMP2A-202ENST00000596708 NGBQ9NPG2 151 aa9.42□□□□□ -0.9
CHMP2A-202ENST00000596708 TIGARQ9NQ88 270 aa9.42□□□□□ -0.9
CHMP2A-202ENST00000596708 UBQLN4Q9NRR5 601 aa9.42□□□□□ -0.9
CHMP2A-202ENST00000596708 C1orf109Q9NX04 203 aa9.42□□□□□ -0.9
CHMP2A-202ENST00000596708 EMCNQ9ULC0 261 aa9.42□□□□□ -0.9
CHMP2A-202ENST00000596708 RNF115Q9Y4L5 304 aa9.42□□□□□ -0.9
CHMP2A-202ENST00000596708 GIMAP1-GIMAP5A0A087WTJ2 511 aa9.41□□□□□ -0.9
CHMP2A-202ENST00000596708 C7orf72A4D263 438 aa9.41□□□□□ -0.9
CHMP2A-202ENST00000596708 RNF223E7ERA6 249 aa9.41□□□□□ -0.9
CHMP2A-202ENST00000596708 NTN1O95631 604 aa9.41□□□□□ -0.9
CHMP2A-202ENST00000596708 TP53P04637 393 aaPredicted RBP9.41□□□□□ -0.9
CHMP2A-202ENST00000596708 EFNA1P20827 205 aaPredicted RBP9.41□□□□□ -0.9
CHMP2A-202ENST00000596708 PRPH2P23942 346 aa9.41□□□□□ -0.9
CHMP2A-202ENST00000596708 PSMA4P25789 261 aaKnown RBP9.41□□□□□ -0.9
CHMP2A-202ENST00000596708 LCN1P31025 176 aa9.41□□□□□ -0.9
CHMP2A-202ENST00000596708 CDKN1AP38936 164 aa9.41□□□□□ -0.9
CHMP2A-202ENST00000596708 EIF1P41567 113 aaKnown RBP9.41□□□□□ -0.9
CHMP2A-202ENST00000596708 SERPINB4P48594 390 aa9.41□□□□□ -0.9
CHMP2A-202ENST00000596708 CCT5P48643 541 aa9.41□□□□□ -0.9
CHMP2A-202ENST00000596708 PRIM2P49643 509 aa9.41□□□□□ -0.9
CHMP2A-202ENST00000596708 POU6F2P78424 691 aaPredicted RBP9.41□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms