RNA–Protein interactions for RNA: ENST00000596136.5

USE1-207, Transcript of unconventional SNARE in the ER 1, humanhuman

TSL 1 (best) BASIC

Gene USE1, Length 637 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USE1-207ENST00000596136 CD226Q15762 336 aa11.78□□□□□ -0.52
USE1-207ENST00000596136 EEF1A1P5Q5VTE0 462 aa11.78□□□□□ -0.52
USE1-207ENST00000596136 RAET1LQ5VY80 246 aa11.78□□□□□ -0.52
USE1-207ENST00000596136 ARSKQ6UWY0 536 aa11.78□□□□□ -0.52
USE1-207ENST00000596136 MAVSQ7Z434 540 aa11.78□□□□□ -0.52
USE1-207ENST00000596136 GTPBP8Q8N3Z3 284 aaPredicted RBP11.78□□□□□ -0.52
USE1-207ENST00000596136 OR5AK3PQ8NH89 298 aa11.78□□□□□ -0.52
USE1-207ENST00000596136 PIWIL2Q8TC59 973 aaKnown RBP11.78□□□□□ -0.52
USE1-207ENST00000596136 ATP6V1G3Q96LB4 118 aa11.78□□□□□ -0.52
USE1-207ENST00000596136 CCDC115Q96NT0 180 aa11.78□□□□□ -0.52
USE1-207ENST00000596136 MCCC2Q9HCC0 563 aa11.78□□□□□ -0.52
USE1-207ENST00000596136 FOXD3Q9UJU5 478 aaPredicted RBP11.78□□□□□ -0.52
USE1-207ENST00000596136 PCDHGB4Q9UN71 923 aa11.78□□□□□ -0.52
USE1-207ENST00000596136 L3MBTL1Q9Y468 752 aa11.78□□□□□ -0.52
USE1-207ENST00000596136 AP4B1Q9Y6B7 739 aa11.78□□□□□ -0.52
USE1-207ENST00000596136 HEATR5AQ86XA9 2040 aa11.77□□□□□ -0.52
USE1-207ENST00000596136 RNF103-CHMP3A0A140T963 221 aa11.77□□□□□ -0.53
USE1-207ENST00000596136 AK1P00568 194 aa11.77□□□□□ -0.53
USE1-207ENST00000596136 CRHP06850 196 aa11.77□□□□□ -0.53
USE1-207ENST00000596136 TMIGD3P0DMS9 266 aaPredicted RBP11.77□□□□□ -0.53
USE1-207ENST00000596136 HPGDP15428 266 aa11.77□□□□□ -0.53
USE1-207ENST00000596136 POU3F2P20265 443 aaPredicted RBP11.77□□□□□ -0.53
USE1-207ENST00000596136 ATP6V1C1P21283 382 aa11.77□□□□□ -0.53
USE1-207ENST00000596136 S100A3P33764 101 aa11.77□□□□□ -0.53
USE1-207ENST00000596136 DGKQP52824 942 aa11.77□□□□□ -0.53
USE1-207ENST00000596136 FOXF2Q12947 444 aa11.77□□□□□ -0.53
USE1-207ENST00000596136 PLPPR5Q32ZL2 321 aa11.77□□□□□ -0.53
USE1-207ENST00000596136 ARHGAP11BQ3KRB8 267 aa11.77□□□□□ -0.53
USE1-207ENST00000596136 FAM174BQ3ZCQ3 159 aa11.77□□□□□ -0.53
USE1-207ENST00000596136 DDX59Q5T1V6 619 aaKnown RBP eCLIP11.77□□□□□ -0.53
USE1-207ENST00000596136 SAXO2Q658L1 398 aa11.77□□□□□ -0.53
USE1-207ENST00000596136 HEPHL1Q6MZM0 1159 aa11.77□□□□□ -0.53
USE1-207ENST00000596136 ANKRD46Q86W74 232 aa11.77□□□□□ -0.53
USE1-207ENST00000596136 MEIOBQ8N635 442 aa11.77□□□□□ -0.53
USE1-207ENST00000596136 METTL25Q8N6Q8 603 aa11.77□□□□□ -0.53
USE1-207ENST00000596136 ZNF527Q8NB42 609 aa11.77□□□□□ -0.53
USE1-207ENST00000596136 GLB1L3Q8NCI6 653 aaPredicted RBP11.77□□□□□ -0.53
USE1-207ENST00000596136 OR5D16Q8NGK9 328 aa11.77□□□□□ -0.53
USE1-207ENST00000596136 OR4A15Q8NGL6 344 aa11.77□□□□□ -0.53
USE1-207ENST00000596136 RNASE6Q93091 150 aaKnown RBP11.77□□□□□ -0.53
USE1-207ENST00000596136 ZBTB8AQ96BR9 441 aa11.77□□□□□ -0.53
USE1-207ENST00000596136 NEURL3Q96EH8 262 aa11.77□□□□□ -0.53
USE1-207ENST00000596136 CHMP6Q96FZ7 201 aa11.77□□□□□ -0.53
USE1-207ENST00000596136 LURAP1Q96LR2 239 aa11.77□□□□□ -0.53
USE1-207ENST00000596136 SFXN3Q9BWM7 321 aa11.77□□□□□ -0.53
USE1-207ENST00000596136 NMUR2Q9GZQ4 415 aa11.77□□□□□ -0.53
USE1-207ENST00000596136 ACBD3Q9H3P7 528 aa11.77□□□□□ -0.53
USE1-207ENST00000596136 VIPAS39Q9H9C1 493 aa11.77□□□□□ -0.53
USE1-207ENST00000596136 MARCOQ9UEW3 520 aaPredicted RBP11.77□□□□□ -0.53
USE1-207ENST00000596136 ICAM5Q9UMF0 924 aa11.77□□□□□ -0.53
USE1-207ENST00000596136 OTOGQ6ZRI0 2925 aa11.77□□□□□ -0.53
USE1-207ENST00000596136 AKAP9Q99996 3911 aa11.77□□□□□ -0.53
USE1-207ENST00000596136 GOLGA8QA0A0J9YX86 632 aa11.76□□□□□ -0.53
USE1-207ENST00000596136 GOLGA8OA6NCC3 632 aa11.76□□□□□ -0.53
USE1-207ENST00000596136 GOLGA8NF8WBI6 632 aa11.76□□□□□ -0.53
USE1-207ENST00000596136 TGM6O95932 706 aa11.76□□□□□ -0.53
USE1-207ENST00000596136 AGR2O95994 175 aa11.76□□□□□ -0.53
USE1-207ENST00000596136 PGRP06401 933 aa11.76□□□□□ -0.53
USE1-207ENST00000596136 LINGO3P0C6S8 592 aa11.76□□□□□ -0.53
USE1-207ENST00000596136 KITP10721 976 aa11.76□□□□□ -0.53
USE1-207ENST00000596136 IDO1P14902 403 aa11.76□□□□□ -0.53
USE1-207ENST00000596136 H2AFXP16104 143 aaPredicted RBP11.76□□□□□ -0.53
USE1-207ENST00000596136 CAPN3P20807 821 aa11.76□□□□□ -0.53
USE1-207ENST00000596136 TCEA1P23193 301 aaKnown RBP11.76□□□□□ -0.53
USE1-207ENST00000596136 SOAT1P35610 550 aa11.76□□□□□ -0.53
USE1-207ENST00000596136 SUMO3P55854 103 aaPredicted RBP11.76□□□□□ -0.53
USE1-207ENST00000596136 CLDN20P56880 219 aa11.76□□□□□ -0.53
USE1-207ENST00000596136 RPS26P62854 115 aaKnown RBP11.76□□□□□ -0.53
USE1-207ENST00000596136 TLE4Q04727 773 aa11.76□□□□□ -0.53
USE1-207ENST00000596136 LRRC74AQ0VAA2 488 aa11.76□□□□□ -0.53
USE1-207ENST00000596136 ZNF141Q15928 474 aa11.76□□□□□ -0.53
USE1-207ENST00000596136 GSTA3Q16772 222 aa11.76□□□□□ -0.53
USE1-207ENST00000596136 FLYWCH1Q4VC44 716 aa11.76□□□□□ -0.53
USE1-207ENST00000596136 SLC9B1Q4ZJI4 515 aa11.76□□□□□ -0.53
USE1-207ENST00000596136 PDCD4Q53EL6 469 aaKnown RBP11.76□□□□□ -0.53
USE1-207ENST00000596136 TTMPQ5BVD1 217 aa11.76□□□□□ -0.53
USE1-207ENST00000596136 GGNQ86UU5 652 aa11.76□□□□□ -0.53
USE1-207ENST00000596136 CLEC4FQ8N1N0 589 aa11.76□□□□□ -0.53
USE1-207ENST00000596136 GATSQ8NAP1 163 aa11.76□□□□□ -0.53
USE1-207ENST00000596136 OR5M1Q8NGP8 315 aa11.76□□□□□ -0.53
USE1-207ENST00000596136 B4GALNT2Q8NHY0 566 aa11.76□□□□□ -0.53
USE1-207ENST00000596136 POC1BQ8TC44 478 aa11.76□□□□□ -0.53
USE1-207ENST00000596136 OIT3Q8WWZ8 545 aa11.76□□□□□ -0.53
USE1-207ENST00000596136 SLC35G5Q96KT7 338 aa11.76□□□□□ -0.53
USE1-207ENST00000596136 C7orf26Q96N11 449 aa11.76□□□□□ -0.53
USE1-207ENST00000596136 NPAS1Q99742 590 aa11.76□□□□□ -0.53
USE1-207ENST00000596136 KLHDC3Q9BQ90 382 aa11.76□□□□□ -0.53
USE1-207ENST00000596136 ZNF350Q9GZX5 532 aa11.76□□□□□ -0.53
USE1-207ENST00000596136 OR51I1Q9H343 314 aa11.76□□□□□ -0.53
USE1-207ENST00000596136 SDR39U1Q9NRG7 319 aaPredicted RBP11.76□□□□□ -0.53
USE1-207ENST00000596136 MED17Q9NVC6 651 aa11.76□□□□□ -0.53
USE1-207ENST00000596136 STOML1Q9UBI4 398 aa11.76□□□□□ -0.53
USE1-207ENST00000596136 KCNE5Q9UJ90 142 aa11.76□□□□□ -0.53
USE1-207ENST00000596136 VDAC3Q9Y277 283 aa11.76□□□□□ -0.53
USE1-207ENST00000596136 ZNF175Q9Y473 711 aa11.76□□□□□ -0.53
USE1-207ENST00000596136 DTNAQ9Y4J8 743 aa11.76□□□□□ -0.53
USE1-207ENST00000596136 CCDC168Q8NDH2 2452 aa11.76□□□□□ -0.53
USE1-207ENST00000596136 TNFSF12-TNFSF13A0A0A6YY99 330 aa11.75□□□□□ -0.53
USE1-207ENST00000596136 FAM221AA4D161 298 aa11.75□□□□□ -0.53
USE1-207ENST00000596136 H0YC42 278 aa11.75□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms