RNA–Protein interactions for RNA: ENST00000595792.1

PNKP-206, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 2

Gene PNKP, Length 645 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-206ENST00000595792 VPS26BQ4G0F5 336 aa16.05■□□□□ 0.16
PNKP-206ENST00000595792 OR4F3Q6IEY1 312 aa16.05■□□□□ 0.16
PNKP-206ENST00000595792 CDC73Q6P1J9 531 aa16.05■□□□□ 0.16
PNKP-206ENST00000595792 CAMKMTQ7Z624 323 aa16.05■□□□□ 0.16
PNKP-206ENST00000595792 CLEC4FQ8N1N0 589 aa16.05■□□□□ 0.16
PNKP-206ENST00000595792 COX18Q8N8Q8 333 aa16.05■□□□□ 0.16
PNKP-206ENST00000595792 ANKRD42Q8N9B4 389 aa16.05■□□□□ 0.16
PNKP-206ENST00000595792 OR5AK3PQ8NH89 298 aa16.05■□□□□ 0.16
PNKP-206ENST00000595792 ZNF845Q96IR2 970 aaPredicted RBP16.05■□□□□ 0.16
PNKP-206ENST00000595792 DUSP26Q9BV47 211 aa16.05■□□□□ 0.16
PNKP-206ENST00000595792 PINK1Q9BXM7 581 aa16.05■□□□□ 0.16
PNKP-206ENST00000595792 BHLHE41Q9C0J9 482 aaPredicted RBP16.05■□□□□ 0.16
PNKP-206ENST00000595792 OPN3Q9H1Y3 402 aaPredicted RBP16.05■□□□□ 0.16
PNKP-206ENST00000595792 PIGMQ9H3S5 423 aa16.05■□□□□ 0.16
PNKP-206ENST00000595792 PIGUQ9H490 435 aa16.05■□□□□ 0.16
PNKP-206ENST00000595792 EIF3LQ9Y262 564 aaKnown RBP16.05■□□□□ 0.16
PNKP-206ENST00000595792 EPB41L3Q9Y2J2 1087 aaPredicted RBP16.05■□□□□ 0.16
PNKP-206ENST00000595792 SETD2Q9BYW2 2564 aaPredicted RBP16.05■□□□□ 0.16
PNKP-206ENST00000595792 OIP5O43482 229 aa16.04■□□□□ 0.16
PNKP-206ENST00000595792 SCN2BO60939 215 aa16.04■□□□□ 0.16
PNKP-206ENST00000595792 RAF1P04049 648 aa16.04■□□□□ 0.16
PNKP-206ENST00000595792 PEPDP12955 493 aa16.04■□□□□ 0.16
PNKP-206ENST00000595792 PRIM2P49643 509 aa16.04■□□□□ 0.16
PNKP-206ENST00000595792 RNF144AP50876 292 aaPredicted RBP16.04■□□□□ 0.16
PNKP-206ENST00000595792 POU6F2P78424 691 aaPredicted RBP16.04■□□□□ 0.16
PNKP-206ENST00000595792 FAM27E3Q08E93 113 aa16.04■□□□□ 0.16
PNKP-206ENST00000595792 STX3Q13277 289 aa16.04■□□□□ 0.16
PNKP-206ENST00000595792 TP53BP2Q13625 1128 aa16.04■□□□□ 0.16
PNKP-206ENST00000595792 GANABQ14697 944 aaKnown RBP16.04■□□□□ 0.16
PNKP-206ENST00000595792 SMU1Q2TAY7 513 aa16.04■□□□□ 0.16
PNKP-206ENST00000595792 CHMP1BQ7LBR1 199 aa16.04■□□□□ 0.16
PNKP-206ENST00000595792 BTLAQ7Z6A9 289 aa16.04■□□□□ 0.16
PNKP-206ENST00000595792 MEIOBQ8N635 442 aa16.04■□□□□ 0.16
PNKP-206ENST00000595792 CHDHQ8NE62 594 aaPredicted RBP16.04■□□□□ 0.16
PNKP-206ENST00000595792 JADE3Q92613 823 aa16.04■□□□□ 0.16
PNKP-206ENST00000595792 STARD4Q96DR4 205 aa16.04■□□□□ 0.16
PNKP-206ENST00000595792 DTNBP1Q96EV8 351 aa16.04■□□□□ 0.16
PNKP-206ENST00000595792 STACQ99469 402 aa16.04■□□□□ 0.16
PNKP-206ENST00000595792 BTBD2Q9BX70 525 aa16.04■□□□□ 0.16
PNKP-206ENST00000595792 NUF2Q9BZD4 464 aa16.04■□□□□ 0.16
PNKP-206ENST00000595792 ACBD3Q9H3P7 528 aa16.04■□□□□ 0.16
PNKP-206ENST00000595792 DUSP22Q9NRW4 184 aa16.04■□□□□ 0.16
PNKP-206ENST00000595792 NOP53Q9NZM5 478 aaKnown RBP16.04■□□□□ 0.16
PNKP-206ENST00000595792 TESMINQ9Y4I5 508 aa16.04■□□□□ 0.16
PNKP-206ENST00000595792 MTORP42345 2549 aa16.04■□□□□ 0.16
PNKP-206ENST00000595792 NDUFB5O43674 189 aa16.03■□□□□ 0.16
PNKP-206ENST00000595792 C1QCP02747 245 aa16.03■□□□□ 0.16
PNKP-206ENST00000595792 ALDOCP09972 364 aaKnown RBP16.03■□□□□ 0.16
PNKP-206ENST00000595792 MYZAPP0CAP1 466 aa16.03■□□□□ 0.16
PNKP-206ENST00000595792 CCKARP32238 428 aa16.03■□□□□ 0.16
PNKP-206ENST00000595792 CLK3P49761 638 aaKnown RBP16.03■□□□□ 0.16
PNKP-206ENST00000595792 PPP2R2AP63151 447 aa16.03■□□□□ 0.16
PNKP-206ENST00000595792 KEAP1Q14145 624 aa16.03■□□□□ 0.16
PNKP-206ENST00000595792 PGS1Q32NB8 556 aa16.03■□□□□ 0.16
PNKP-206ENST00000595792 BEND6Q5SZJ8 279 aaPredicted RBP16.03■□□□□ 0.16
PNKP-206ENST00000595792 GGNQ86UU5 652 aa16.03■□□□□ 0.16
PNKP-206ENST00000595792 OR5D16Q8NGK9 328 aa16.03■□□□□ 0.16
PNKP-206ENST00000595792 FNDC9Q8TBE3 224 aa16.03■□□□□ 0.16
PNKP-206ENST00000595792 SFXN5Q8TD22 340 aa16.03■□□□□ 0.16
PNKP-206ENST00000595792 ZNF524Q96C55 264 aa16.03■□□□□ 0.16
PNKP-206ENST00000595792 MBD6Q96DN6 1003 aa16.03■□□□□ 0.16
PNKP-206ENST00000595792 DACH2Q96NX9 599 aa16.03■□□□□ 0.16
PNKP-206ENST00000595792 ALPK1Q96QP1 1244 aa16.03■□□□□ 0.16
PNKP-206ENST00000595792 PAIP2Q9BPZ3 127 aaKnown RBP16.03■□□□□ 0.16
PNKP-206ENST00000595792 ACTRT3Q9BYD9 372 aa16.03■□□□□ 0.16
PNKP-206ENST00000595792 PTGES2Q9H7Z7 377 aa16.03■□□□□ 0.16
PNKP-206ENST00000595792 ATAD3AQ9NVI7 634 aa16.03■□□□□ 0.16
PNKP-206ENST00000595792 GIN1Q9NXP7 522 aa16.03■□□□□ 0.16
PNKP-206ENST00000595792 KLHL28Q9NXS3 571 aa16.03■□□□□ 0.16
PNKP-206ENST00000595792 C6orf203Q9P0P8 240 aaPredicted RBP16.03■□□□□ 0.16
PNKP-206ENST00000595792 VDAC3Q9Y277 283 aa16.03■□□□□ 0.16
PNKP-206ENST00000595792 MAP1AP78559 2803 aaPredicted RBP16.03■□□□□ 0.16
PNKP-206ENST00000595792 TMEM120BA0PK00 339 aa16.02■□□□□ 0.16
PNKP-206ENST00000595792 NPIPB9F8W1W9 429 aa16.02■□□□□ 0.16
PNKP-206ENST00000595792 SDHDO14521 159 aa16.02■□□□□ 0.16
PNKP-206ENST00000595792 SIAH2O43255 324 aa16.02■□□□□ 0.16
PNKP-206ENST00000595792 PSMA4P25789 261 aaKnown RBP16.02■□□□□ 0.16
PNKP-206ENST00000595792 KIR2DL2P43627 348 aaPredicted RBP16.02■□□□□ 0.16
PNKP-206ENST00000595792 RPS26P62854 115 aaKnown RBP16.02■□□□□ 0.16
PNKP-206ENST00000595792 ADAM8P78325 824 aa16.02■□□□□ 0.16
PNKP-206ENST00000595792 MAD2L1Q13257 205 aaPredicted RBP16.02■□□□□ 0.16
PNKP-206ENST00000595792 PON3Q15166 354 aa16.02■□□□□ 0.16
PNKP-206ENST00000595792 DEFB113Q30KQ7 82 aa16.02■□□□□ 0.16
PNKP-206ENST00000595792 LSM12Q3MHD2 195 aaKnown RBP16.02■□□□□ 0.16
PNKP-206ENST00000595792 GLYR1Q49A26 553 aaPredicted RBP16.02■□□□□ 0.16
PNKP-206ENST00000595792 DDX59Q5T1V6 619 aaKnown RBP eCLIP16.02■□□□□ 0.16
PNKP-206ENST00000595792 ZNF474Q6S9Z5 364 aaPredicted RBP16.02■□□□□ 0.16
PNKP-206ENST00000595792 OLIG3Q7RTU3 272 aa16.02■□□□□ 0.16
PNKP-206ENST00000595792 WFDC11Q8NEX6 87 aa16.02■□□□□ 0.16
PNKP-206ENST00000595792 OR56A1Q8NGH5 318 aa16.02■□□□□ 0.16
PNKP-206ENST00000595792 POC1BQ8TC44 478 aa16.02■□□□□ 0.16
PNKP-206ENST00000595792 TLCD1Q96CP7 247 aa16.02■□□□□ 0.16
PNKP-206ENST00000595792 SH3YL1Q96HL8 342 aaPredicted RBP16.02■□□□□ 0.16
PNKP-206ENST00000595792 TEX37Q96LM6 180 aa16.02■□□□□ 0.16
PNKP-206ENST00000595792 OR7D2Q96RA2 312 aa16.02■□□□□ 0.16
PNKP-206ENST00000595792 GSX1Q9H4S2 264 aaPredicted RBP16.02■□□□□ 0.16
PNKP-206ENST00000595792 MEAF6Q9HAF1 191 aa16.02■□□□□ 0.16
PNKP-206ENST00000595792 UBQLN4Q9NRR5 601 aa16.02■□□□□ 0.16
PNKP-206ENST00000595792 MSTNO14793 375 aa16.01■□□□□ 0.15
PNKP-206ENST00000595792 CFLARO15519 480 aa16.01■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms