RNA–Protein interactions for RNA: ENST00000594092.5

VRK3-207, Transcript of vaccinia related kinase 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VRK3, Length 1,831 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-207ENST00000594092 PRRC1Q96M27 445 aa13.98□□□□□ -0.17
VRK3-207ENST00000594092 ALPK1Q96QP1 1244 aa13.98□□□□□ -0.17
VRK3-207ENST00000594092 ADOQ96SZ5 270 aa13.98□□□□□ -0.17
VRK3-207ENST00000594092 PRR14Q9BWN1 585 aa13.98□□□□□ -0.17
VRK3-207ENST00000594092 HOXD1Q9GZZ0 328 aa13.98□□□□□ -0.17
VRK3-207ENST00000594092 ST6GALNAC1Q9NSC7 600 aaPredicted RBP13.98□□□□□ -0.17
VRK3-207ENST00000594092 FLRT3Q9NZU0 649 aa13.98□□□□□ -0.17
VRK3-207ENST00000594092 TMCC3Q9ULS5 477 aa13.98□□□□□ -0.17
VRK3-207ENST00000594092 C21orf140B9A014 251 aa13.97□□□□□ -0.17
VRK3-207ENST00000594092 STMND1H3BQB6 276 aa13.97□□□□□ -0.17
VRK3-207ENST00000594092 TERTO14746 1132 aaKnown RBP13.97□□□□□ -0.17
VRK3-207ENST00000594092 ZFAND5O76080 213 aa13.97□□□□□ -0.17
VRK3-207ENST00000594092 H1F0P07305 194 aaKnown RBP13.97□□□□□ -0.17
VRK3-207ENST00000594092 ITGAMP11215 1152 aa13.97□□□□□ -0.17
VRK3-207ENST00000594092 ANXA8P13928 327 aa13.97□□□□□ -0.17
VRK3-207ENST00000594092 F8A1P23610 371 aa13.97□□□□□ -0.17
VRK3-207ENST00000594092 ABCD3P28288 659 aa13.97□□□□□ -0.17
VRK3-207ENST00000594092 ZNF136P52737 540 aa13.97□□□□□ -0.17
VRK3-207ENST00000594092 FGFBP1Q14512 234 aa13.97□□□□□ -0.17
VRK3-207ENST00000594092 SSPNQ14714 243 aa13.97□□□□□ -0.17
VRK3-207ENST00000594092 BTBD16Q32M84 506 aa13.97□□□□□ -0.17
VRK3-207ENST00000594092 C16orf47Q6ZP98 133 aaPredicted RBP13.97□□□□□ -0.17
VRK3-207ENST00000594092 PPP1R32Q7Z5V6 425 aa13.97□□□□□ -0.17
VRK3-207ENST00000594092 OFCC1Q8IZS5 231 aa13.97□□□□□ -0.17
VRK3-207ENST00000594092 OR5L2Q8NGL0 311 aa13.97□□□□□ -0.17
VRK3-207ENST00000594092 ELP5Q8TE02 316 aa13.97□□□□□ -0.17
VRK3-207ENST00000594092 NR4A3Q92570 626 aa13.97□□□□□ -0.17
VRK3-207ENST00000594092 CNOT9Q92600 299 aaKnown RBP13.97□□□□□ -0.17
VRK3-207ENST00000594092 OMA1Q96E52 524 aa13.97□□□□□ -0.17
VRK3-207ENST00000594092 PSD2Q9BQI7 771 aa13.97□□□□□ -0.17
VRK3-207ENST00000594092 ARMC7Q9H6L4 198 aa13.97□□□□□ -0.17
VRK3-207ENST00000594092 CTPS2Q9NRF8 586 aa13.97□□□□□ -0.17
VRK3-207ENST00000594092 UBQLN4Q9NRR5 601 aa13.97□□□□□ -0.17
VRK3-207ENST00000594092 DLL3Q9NYJ7 618 aa13.97□□□□□ -0.17
VRK3-207ENST00000594092 PTPRBP23467 1997 aa13.97□□□□□ -0.17
VRK3-207ENST00000594092 ARRDC5A6NEK1 342 aa13.97□□□□□ -0.17
VRK3-207ENST00000594092 AP3D1O14617 1153 aa13.97□□□□□ -0.17
VRK3-207ENST00000594092 ABCB7O75027 752 aa13.97□□□□□ -0.17
VRK3-207ENST00000594092 MITFO75030 526 aaPredicted RBP13.97□□□□□ -0.17
VRK3-207ENST00000594092 UTS2O95399 124 aa13.97□□□□□ -0.17
VRK3-207ENST00000594092 GKN3PP0CG01 181 aa13.97□□□□□ -0.17
VRK3-207ENST00000594092 CYP4B1P13584 511 aa13.97□□□□□ -0.17
VRK3-207ENST00000594092 IL12BP29460 328 aa13.97□□□□□ -0.17
VRK3-207ENST00000594092 LCN1P31025 176 aa13.97□□□□□ -0.17
VRK3-207ENST00000594092 OTX2P32243 289 aa13.97□□□□□ -0.17
VRK3-207ENST00000594092 KRT20P35900 424 aa13.97□□□□□ -0.17
VRK3-207ENST00000594092 DLSTP36957 453 aa13.97□□□□□ -0.17
VRK3-207ENST00000594092 TPD52P55327 224 aaPredicted RBP13.97□□□□□ -0.17
VRK3-207ENST00000594092 PSPHP78330 225 aa13.97□□□□□ -0.17
VRK3-207ENST00000594092 FOXD4Q12950 439 aaPredicted RBP13.97□□□□□ -0.17
VRK3-207ENST00000594092 EXT1Q16394 746 aa13.97□□□□□ -0.17
VRK3-207ENST00000594092 KLHL26Q53HC5 615 aa13.97□□□□□ -0.17
VRK3-207ENST00000594092 FGD3Q5JSP0 725 aa13.97□□□□□ -0.17
VRK3-207ENST00000594092 PLAG1Q6DJT9 500 aa13.97□□□□□ -0.17
VRK3-207ENST00000594092 DESI1Q6ICB0 168 aa13.97□□□□□ -0.17
VRK3-207ENST00000594092 GRAMD2AQ8IUY3 354 aa13.97□□□□□ -0.17
VRK3-207ENST00000594092 GALNT15Q8N3T1 639 aa13.97□□□□□ -0.17
VRK3-207ENST00000594092 OIT3Q8WWZ8 545 aa13.97□□□□□ -0.17
VRK3-207ENST00000594092 FEVQ99581 238 aa13.97□□□□□ -0.17
VRK3-207ENST00000594092 MCHR1Q99705 422 aa13.97□□□□□ -0.17
VRK3-207ENST00000594092 FNDC11Q9BVV2 318 aa13.97□□□□□ -0.17
VRK3-207ENST00000594092 GPR87Q9BY21 358 aa13.97□□□□□ -0.17
VRK3-207ENST00000594092 RIBC2Q9H4K1 309 aa13.97□□□□□ -0.17
VRK3-207ENST00000594092 ZNF696Q9H7X3 374 aa13.97□□□□□ -0.17
VRK3-207ENST00000594092 NTNG1Q9Y2I2 539 aa13.97□□□□□ -0.17
VRK3-207ENST00000594092 LOC101059948A0A1B0GTJ6 334 aa13.96□□□□□ -0.17
VRK3-207ENST00000594092 LOC100130705A0A1B0GUX0 176 aa13.96□□□□□ -0.17
VRK3-207ENST00000594092 SERINC4A6NH21 518 aa13.96□□□□□ -0.17
VRK3-207ENST00000594092 CDRT15L2A8MXV6 281 aa13.96□□□□□ -0.17
VRK3-207ENST00000594092 WWP2O00308 870 aa13.96□□□□□ -0.17
VRK3-207ENST00000594092 SLC16A6O15403 523 aa13.96□□□□□ -0.17
VRK3-207ENST00000594092 ICOSLGO75144 302 aa13.96□□□□□ -0.17
VRK3-207ENST00000594092 UGT2B11O75310 529 aa13.96□□□□□ -0.17
VRK3-207ENST00000594092 OXSR1O95747 527 aaPredicted RBP13.96□□□□□ -0.17
VRK3-207ENST00000594092 CELA2AP08217 269 aa13.96□□□□□ -0.17
VRK3-207ENST00000594092 PRG2P13727 222 aa13.96□□□□□ -0.17
VRK3-207ENST00000594092 NRG3P56975 720 aa13.96□□□□□ -0.17
VRK3-207ENST00000594092 ENTPD8Q5MY95 495 aa13.96□□□□□ -0.17
VRK3-207ENST00000594092 DCST1Q5T197 706 aa13.96□□□□□ -0.17
VRK3-207ENST00000594092 TTC33Q6PID6 262 aaPredicted RBP13.96□□□□□ -0.17
VRK3-207ENST00000594092 NDUFAF7Q7L592 441 aa13.96□□□□□ -0.17
VRK3-207ENST00000594092 TMPRSS7Q7RTY8 843 aa13.96□□□□□ -0.17
VRK3-207ENST00000594092 CMIPQ8IY22 773 aa13.96□□□□□ -0.17
VRK3-207ENST00000594092 C8orf59Q8N0T1 100 aaPredicted RBP13.96□□□□□ -0.17
VRK3-207ENST00000594092 SLC5A8Q8N695 610 aa13.96□□□□□ -0.17
VRK3-207ENST00000594092 ZNF527Q8NB42 609 aa13.96□□□□□ -0.17
VRK3-207ENST00000594092 MUS81Q96NY9 551 aa13.96□□□□□ -0.17
VRK3-207ENST00000594092 ZNF556Q9HAH1 456 aa13.96□□□□□ -0.17
VRK3-207ENST00000594092 DNAJB12Q9NXW2 375 aaKnown RBP13.96□□□□□ -0.17
VRK3-207ENST00000594092 MYRFQ9Y2G1 1151 aa13.96□□□□□ -0.17
VRK3-207ENST00000594092 NSG1A0A0A6YYJ2 146 aa13.95□□□□□ -0.18
VRK3-207ENST00000594092 TRBV4-1A0A0J9YWV2 114 aa13.95□□□□□ -0.18
VRK3-207ENST00000594092 A0A1W2PRQ8 180 aa13.95□□□□□ -0.18
VRK3-207ENST00000594092 CPSF4LA6NMK7 179 aaKnown RBP13.95□□□□□ -0.18
VRK3-207ENST00000594092 FAAHO00519 579 aa13.95□□□□□ -0.18
VRK3-207ENST00000594092 ZNF354AO60765 605 aaPredicted RBP13.95□□□□□ -0.18
VRK3-207ENST00000594092 NADKO95544 446 aaPredicted RBP13.95□□□□□ -0.18
VRK3-207ENST00000594092 TBXA2RP21731 343 aa13.95□□□□□ -0.18
VRK3-207ENST00000594092 ELAVL4P26378 380 aaKnown RBP13.95□□□□□ -0.18
VRK3-207ENST00000594092 CD82P27701 267 aa13.95□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms