RNA–Protein interactions for RNA: ENST00000593223.1

SMAD4-216, Transcript of SMAD family member 4, humanhuman

TSL 3

Gene SMAD4, Length 568 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-216ENST00000593223 EXOC3L2Q2M3D2 409 aa4.23□□□□□ -1.73
SMAD4-216ENST00000593223 ANKRD55Q3KP44 614 aa4.23□□□□□ -1.73
SMAD4-216ENST00000593223 FAM174BQ3ZCQ3 159 aa4.23□□□□□ -1.73
SMAD4-216ENST00000593223 WLSQ5T9L3 541 aa4.23□□□□□ -1.73
SMAD4-216ENST00000593223 AGBL2Q5U5Z8 902 aa4.23□□□□□ -1.73
SMAD4-216ENST00000593223 BSPRYQ5W0U4 402 aa4.23□□□□□ -1.73
SMAD4-216ENST00000593223 SEL1L3Q68CR1 1132 aa4.23□□□□□ -1.73
SMAD4-216ENST00000593223 OR4A47Q6IF82 309 aa4.23□□□□□ -1.73
SMAD4-216ENST00000593223 UGT3A1Q6NUS8 523 aa4.23□□□□□ -1.73
SMAD4-216ENST00000593223 PODNL1Q6PEZ8 512 aa4.23□□□□□ -1.73
SMAD4-216ENST00000593223 LINC00523Q86TU6 105 aa4.23□□□□□ -1.73
SMAD4-216ENST00000593223 CDKL3Q8IVW4 592 aaPredicted RBP4.23□□□□□ -1.73
SMAD4-216ENST00000593223 KLHDC8AQ8IYD2 350 aa4.23□□□□□ -1.73
SMAD4-216ENST00000593223 ZNF614Q8N883 585 aa4.23□□□□□ -1.73
SMAD4-216ENST00000593223 AMER3Q8N944 861 aa4.23□□□□□ -1.73
SMAD4-216ENST00000593223 ANKFN1Q8N957 763 aa4.23□□□□□ -1.73
SMAD4-216ENST00000593223 FNDC5Q8NAU1 212 aa4.23□□□□□ -1.73
SMAD4-216ENST00000593223 MINDY2Q8NBR6 621 aa4.23□□□□□ -1.73
SMAD4-216ENST00000593223 OR10G8Q8NGN5 311 aa4.23□□□□□ -1.73
SMAD4-216ENST00000593223 OR10Q1Q8NGQ4 319 aa4.23□□□□□ -1.73
SMAD4-216ENST00000593223 GLYATL2Q8WU03 294 aa4.23□□□□□ -1.73
SMAD4-216ENST00000593223 SMAP2Q8WU79 429 aaPredicted RBP4.23□□□□□ -1.73
SMAD4-216ENST00000593223 PIBF1Q8WXW3 757 aa4.23□□□□□ -1.73
SMAD4-216ENST00000593223 RIT1Q92963 219 aa4.23□□□□□ -1.73
SMAD4-216ENST00000593223 ESAMQ96AP7 390 aa4.23□□□□□ -1.73
SMAD4-216ENST00000593223 LURAP1Q96LR2 239 aa4.23□□□□□ -1.73
SMAD4-216ENST00000593223 PRRC1Q96M27 445 aa4.23□□□□□ -1.73
SMAD4-216ENST00000593223 NKX3-1Q99801 234 aaPredicted RBP4.23□□□□□ -1.73
SMAD4-216ENST00000593223 API5Q9BZZ5 524 aaKnown RBP4.23□□□□□ -1.73
SMAD4-216ENST00000593223 GFRA4Q9GZZ7 299 aa4.23□□□□□ -1.73
SMAD4-216ENST00000593223 Q9H8V8 135 aa4.23□□□□□ -1.73
SMAD4-216ENST00000593223 WDR76Q9H967 626 aa4.23□□□□□ -1.73
SMAD4-216ENST00000593223 GTSE1Q9NYZ3 720 aa4.23□□□□□ -1.73
SMAD4-216ENST00000593223 ERVK-18Q9QC07 812 aa4.23□□□□□ -1.73
SMAD4-216ENST00000593223 MAN1B1Q9UKM7 699 aa4.23□□□□□ -1.73
SMAD4-216ENST00000593223 STAP1Q9ULZ2 295 aa4.23□□□□□ -1.73
SMAD4-216ENST00000593223 PPP1R3CQ9UQK1 317 aa4.23□□□□□ -1.73
SMAD4-216ENST00000593223 NIP7Q9Y221 180 aaKnown RBP eCLIP4.23□□□□□ -1.73
SMAD4-216ENST00000593223 MRPS33Q9Y291 106 aaKnown RBP4.23□□□□□ -1.73
SMAD4-216ENST00000593223 MAD1L1Q9Y6D9 718 aa4.23□□□□□ -1.73
SMAD4-216ENST00000593223 DYNC1LI1Q9Y6G9 523 aaKnown RBP4.23□□□□□ -1.73
SMAD4-216ENST00000593223 RTL9Q8NET4 1388 aa4.23□□□□□ -1.73
SMAD4-216ENST00000593223 LRRC37A2A6NM11 1700 aa4.23□□□□□ -1.73
SMAD4-216ENST00000593223 BPTFQ12830 3046 aa4.23□□□□□ -1.73
SMAD4-216ENST00000593223 DMXL1Q9Y485 3027 aa4.23□□□□□ -1.73
SMAD4-216ENST00000593223 GVINP1Q7Z2Y8 2422 aa4.23□□□□□ -1.73
SMAD4-216ENST00000593223 COL1A1P02452 1464 aaPredicted RBP4.23□□□□□ -1.73
SMAD4-216ENST00000593223 DDX60LQ5H9U9 1706 aaKnown RBP4.22□□□□□ -1.73
SMAD4-216ENST00000593223 IGLV7-46A0A075B6I9 117 aa4.22□□□□□ -1.73
SMAD4-216ENST00000593223 NDUFAF8A1L188 74 aa4.22□□□□□ -1.73
SMAD4-216ENST00000593223 SNX3O60493 162 aa4.22□□□□□ -1.73
SMAD4-216ENST00000593223 MAGEC1O60732 1142 aa4.22□□□□□ -1.73
SMAD4-216ENST00000593223 ATP9AO75110 1047 aa4.22□□□□□ -1.73
SMAD4-216ENST00000593223 CLPXO76031 633 aa4.22□□□□□ -1.73
SMAD4-216ENST00000593223 CALCAP01258 141 aa4.22□□□□□ -1.73
SMAD4-216ENST00000593223 CAPN1P07384 714 aa4.22□□□□□ -1.73
SMAD4-216ENST00000593223 SLC2A2P11168 524 aaPredicted RBP4.22□□□□□ -1.73
SMAD4-216ENST00000593223 SRMP19623 302 aa4.22□□□□□ -1.73
SMAD4-216ENST00000593223 RWDD2BP57060 319 aa4.22□□□□□ -1.73
SMAD4-216ENST00000593223 IRX4P78413 519 aa4.22□□□□□ -1.73
SMAD4-216ENST00000593223 CBX1P83916 185 aa4.22□□□□□ -1.73
SMAD4-216ENST00000593223 NCBP1Q09161 790 aaKnown RBP4.22□□□□□ -1.73
SMAD4-216ENST00000593223 TNK1Q13470 666 aa4.22□□□□□ -1.73
SMAD4-216ENST00000593223 NONOQ15233 471 aaKnown RBP eCLIP4.22□□□□□ -1.73
SMAD4-216ENST00000593223 HLA-BQ31612 363 aa4.22□□□□□ -1.73
SMAD4-216ENST00000593223 HIKESHIQ53FT3 197 aa4.22□□□□□ -1.73
SMAD4-216ENST00000593223 HSP90AA4PQ58FG1 418 aa4.22□□□□□ -1.73
SMAD4-216ENST00000593223 XKR6Q5GH73 641 aa4.22□□□□□ -1.73
SMAD4-216ENST00000593223 LDLRAP1Q5SW96 308 aa4.22□□□□□ -1.73
SMAD4-216ENST00000593223 PRAMEF5Q5TYX0 476 aa4.22□□□□□ -1.73
SMAD4-216ENST00000593223 PRAMEF6Q5VXH4 476 aa4.22□□□□□ -1.73
SMAD4-216ENST00000593223 FBXL22Q6P050 247 aa4.22□□□□□ -1.73
SMAD4-216ENST00000593223 LRRC8BQ6P9F7 803 aa4.22□□□□□ -1.73
SMAD4-216ENST00000593223 SASS6Q6UVJ0 657 aa4.22□□□□□ -1.73
SMAD4-216ENST00000593223 SCARA5Q6ZMJ2 495 aa4.22□□□□□ -1.73
SMAD4-216ENST00000593223 LEKR1Q6ZMV7 388 aa4.22□□□□□ -1.73
SMAD4-216ENST00000593223 YRDCQ86U90 279 aaKnown RBP4.22□□□□□ -1.73
SMAD4-216ENST00000593223 LRRC75A-AS1Q8N1F1 130 aa4.22□□□□□ -1.73
SMAD4-216ENST00000593223 ASCC1Q8N9N2 400 aaKnown RBP4.22□□□□□ -1.73
SMAD4-216ENST00000593223 SCFD1Q8WVM8 642 aa4.22□□□□□ -1.73
SMAD4-216ENST00000593223 NSMAFQ92636 917 aa4.22□□□□□ -1.73
SMAD4-216ENST00000593223 FCGR1BQ92637 280 aa4.22□□□□□ -1.73
SMAD4-216ENST00000593223 BADQ92934 168 aa4.22□□□□□ -1.73
SMAD4-216ENST00000593223 TNFRSF14Q92956 283 aa4.22□□□□□ -1.73
SMAD4-216ENST00000593223 C16orf58Q96GQ5 468 aa4.22□□□□□ -1.73
SMAD4-216ENST00000593223 ZNF599Q96NL3 588 aa4.22□□□□□ -1.73
SMAD4-216ENST00000593223 SLC29A1Q99808 456 aa4.22□□□□□ -1.73
SMAD4-216ENST00000593223 CITED1Q99966 193 aa4.22□□□□□ -1.73
SMAD4-216ENST00000593223 TRIM51Q9BSJ1 452 aa4.22□□□□□ -1.73
SMAD4-216ENST00000593223 ALKBH7Q9BT30 221 aaPredicted RBP4.22□□□□□ -1.73
SMAD4-216ENST00000593223 FTHL17Q9BXU8 183 aa4.22□□□□□ -1.73
SMAD4-216ENST00000593223 SHCBP1LQ9BZQ2 653 aa4.22□□□□□ -1.73
SMAD4-216ENST00000593223 EGLN1Q9GZT9 426 aa4.22□□□□□ -1.73
SMAD4-216ENST00000593223 CENPHQ9H3R5 247 aa4.22□□□□□ -1.73
SMAD4-216ENST00000593223 ACTR8Q9H981 624 aa4.22□□□□□ -1.73
SMAD4-216ENST00000593223 MEAF6Q9HAF1 191 aa4.22□□□□□ -1.73
SMAD4-216ENST00000593223 APMAPQ9HDC9 416 aa4.22□□□□□ -1.73
SMAD4-216ENST00000593223 GSN-AS1Q9NRJ2 163 aa4.22□□□□□ -1.73
SMAD4-216ENST00000593223 ZCCHC3Q9NUD5 404 aaKnown RBP4.22□□□□□ -1.73
SMAD4-216ENST00000593223 TMEM181Q9P2C4 612 aa4.22□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms