RNA–Protein interactions for RNA: ENST00000592965.2

MBD3-211, Transcript of methyl-CpG binding domain protein 3, humanhuman

TSL 4

Gene MBD3, Length 568 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3-211ENST00000592965 CCNJQ5T5M9 372 aa20.92■□□□□ 0.94
MBD3-211ENST00000592965 IL23RQ5VWK5 629 aa20.92■□□□□ 0.94
MBD3-211ENST00000592965 ZNF474Q6S9Z5 364 aaPredicted RBP20.92■□□□□ 0.94
MBD3-211ENST00000592965 TGIF2LYQ8IUE0 185 aa20.92■□□□□ 0.94
MBD3-211ENST00000592965 GATSQ8NAP1 163 aa20.92■□□□□ 0.94
MBD3-211ENST00000592965 OR56A1Q8NGH5 318 aa20.92■□□□□ 0.94
MBD3-211ENST00000592965 COQ8BQ96D53 544 aa20.92■□□□□ 0.94
MBD3-211ENST00000592965 PIGUQ9H490 435 aa20.92■□□□□ 0.94
MBD3-211ENST00000592965 MED17Q9NVC6 651 aa20.92■□□□□ 0.94
MBD3-211ENST00000592965 SNX8Q9Y5X2 465 aa20.92■□□□□ 0.94
MBD3-211ENST00000592965 SCDO00767 359 aa20.91■□□□□ 0.94
MBD3-211ENST00000592965 CGAP01215 116 aa20.91■□□□□ 0.94
MBD3-211ENST00000592965 KRT16P08779 473 aa20.91■□□□□ 0.94
MBD3-211ENST00000592965 PSMA4P25789 261 aaKnown RBP20.91■□□□□ 0.94
MBD3-211ENST00000592965 C21orf58P58505 322 aa20.91■□□□□ 0.94
MBD3-211ENST00000592965 FAM27E3Q08E93 113 aa20.91■□□□□ 0.94
MBD3-211ENST00000592965 LSM12Q3MHD2 195 aaKnown RBP20.91■□□□□ 0.94
MBD3-211ENST00000592965 CDC73Q6P1J9 531 aa20.91■□□□□ 0.94
MBD3-211ENST00000592965 WDR75Q8IWA0 830 aaKnown RBP20.91■□□□□ 0.94
MBD3-211ENST00000592965 RIMKLAQ8IXN7 391 aa20.91■□□□□ 0.94
MBD3-211ENST00000592965 SFXN5Q8TD22 340 aa20.91■□□□□ 0.94
MBD3-211ENST00000592965 CDS1Q92903 461 aa20.91■□□□□ 0.94
MBD3-211ENST00000592965 ADGRG7Q96K78 797 aa20.91■□□□□ 0.94
MBD3-211ENST00000592965 PRPF18Q99633 342 aaKnown RBP20.91■□□□□ 0.94
MBD3-211ENST00000592965 ACTRT3Q9BYD9 372 aa20.91■□□□□ 0.94
MBD3-211ENST00000592965 OPN3Q9H1Y3 402 aaPredicted RBP20.91■□□□□ 0.94
MBD3-211ENST00000592965 CXorf36Q9H7Y0 433 aa20.91■□□□□ 0.94
MBD3-211ENST00000592965 NEUROD4Q9HD90 331 aa20.91■□□□□ 0.94
MBD3-211ENST00000592965 ELOVL5Q9NYP7 299 aa20.91■□□□□ 0.94
MBD3-211ENST00000592965 EIF1AYO14602 144 aaKnown RBP20.9■□□□□ 0.94
MBD3-211ENST00000592965 CASKO14936 926 aa20.9■□□□□ 0.94
MBD3-211ENST00000592965 AQP8O94778 261 aa20.9■□□□□ 0.94
MBD3-211ENST00000592965 SOX30O94993 753 aa20.9■□□□□ 0.94
MBD3-211ENST00000592965 CCKARP32238 428 aa20.9■□□□□ 0.94
MBD3-211ENST00000592965 CCT3P49368 545 aaKnown RBP20.9■□□□□ 0.94
MBD3-211ENST00000592965 ZNF41P51814 821 aaPredicted RBP20.9■□□□□ 0.94
MBD3-211ENST00000592965 POU4F3Q15319 338 aa20.9■□□□□ 0.94
MBD3-211ENST00000592965 SGCBQ16585 318 aa20.9■□□□□ 0.94
MBD3-211ENST00000592965 KRTCAP2Q8N6L1 136 aa20.9■□□□□ 0.94
MBD3-211ENST00000592965 TUBGCP3Q96CW5 907 aa20.9■□□□□ 0.94
MBD3-211ENST00000592965 CHMP6Q96FZ7 201 aa20.9■□□□□ 0.94
MBD3-211ENST00000592965 SH3YL1Q96HL8 342 aaPredicted RBP20.9■□□□□ 0.94
MBD3-211ENST00000592965 ZIM3Q96PE6 472 aa20.9■□□□□ 0.94
MBD3-211ENST00000592965 SLC39A3Q9BRY0 314 aa20.9■□□□□ 0.94
MBD3-211ENST00000592965 BHLHE41Q9C0J9 482 aaPredicted RBP20.9■□□□□ 0.94
MBD3-211ENST00000592965 GPATCH2Q9NW75 528 aa20.9■□□□□ 0.94
MBD3-211ENST00000592965 PAQR5Q9NXK6 330 aaPredicted RBP20.9■□□□□ 0.94
MBD3-211ENST00000592965 EIF3LQ9Y262 564 aaKnown RBP20.9■□□□□ 0.94
MBD3-211ENST00000592965 A0A1W2PPR1 153 aa20.89■□□□□ 0.93
MBD3-211ENST00000592965 ADAMDEC1O15204 470 aa20.89■□□□□ 0.93
MBD3-211ENST00000592965 C6orf47O95873 294 aa20.89■□□□□ 0.93
MBD3-211ENST00000592965 CD99P14209 185 aa20.89■□□□□ 0.93
MBD3-211ENST00000592965 UGT2B10P36537 528 aa20.89■□□□□ 0.93
MBD3-211ENST00000592965 EIF1AXP47813 144 aaKnown RBP20.89■□□□□ 0.93
MBD3-211ENST00000592965 RAC1P63000 192 aa20.89■□□□□ 0.93
MBD3-211ENST00000592965 TP53BP2Q13625 1128 aa20.89■□□□□ 0.93
MBD3-211ENST00000592965 KEAP1Q14145 624 aa20.89■□□□□ 0.93
MBD3-211ENST00000592965 CD226Q15762 336 aa20.89■□□□□ 0.93
MBD3-211ENST00000592965 CTU2Q2VPK5 515 aaKnown RBP20.89■□□□□ 0.93
MBD3-211ENST00000592965 FAM214BQ7L5A3 538 aa20.89■□□□□ 0.93
MBD3-211ENST00000592965 NUDCD3Q8IVD9 361 aa20.89■□□□□ 0.93
MBD3-211ENST00000592965 OR10D3Q8NH80 312 aa20.89■□□□□ 0.93
MBD3-211ENST00000592965 B4GALNT2Q8NHY0 566 aa20.89■□□□□ 0.93
MBD3-211ENST00000592965 MOAP1Q96BY2 351 aa20.89■□□□□ 0.93
MBD3-211ENST00000592965 RNF145Q96MT1 663 aa20.89■□□□□ 0.93
MBD3-211ENST00000592965 NPAS1Q99742 590 aa20.89■□□□□ 0.93
MBD3-211ENST00000592965 ASIC5Q9NY37 505 aa20.89■□□□□ 0.93
MBD3-211ENST00000592965 FAF1Q9UNN5 650 aaPredicted RBP20.89■□□□□ 0.93
MBD3-211ENST00000592965 ROS1P08922 2347 aa20.89■□□□□ 0.93
MBD3-211ENST00000592965 ARID1AO14497 2285 aa20.88■□□□□ 0.93
MBD3-211ENST00000592965 CTIFO43310 598 aaKnown RBP20.88■□□□□ 0.93
MBD3-211ENST00000592965 POU2F1P14859 743 aa20.88■□□□□ 0.93
MBD3-211ENST00000592965 ATP6V1C1P21283 382 aa20.88■□□□□ 0.93
MBD3-211ENST00000592965 SLC6A8P48029 635 aa20.88■□□□□ 0.93
MBD3-211ENST00000592965 ZNF844Q08AG5 666 aa20.88■□□□□ 0.93
MBD3-211ENST00000592965 MAD2L1Q13257 205 aaPredicted RBP20.88■□□□□ 0.93
MBD3-211ENST00000592965 SMU1Q2TAY7 513 aa20.88■□□□□ 0.93
MBD3-211ENST00000592965 DEFB113Q30KQ7 82 aa20.88■□□□□ 0.93
MBD3-211ENST00000592965 KRT71Q3SY84 523 aa20.88■□□□□ 0.93
MBD3-211ENST00000592965 SPDYE7PQ495Y7 208 aa20.88■□□□□ 0.93
MBD3-211ENST00000592965 ESPNLQ6ZVH7 1005 aa20.88■□□□□ 0.93
MBD3-211ENST00000592965 MTERF4Q7Z6M4 381 aaKnown RBP20.88■□□□□ 0.93
MBD3-211ENST00000592965 ZNF527Q8NB42 609 aa20.88■□□□□ 0.93
MBD3-211ENST00000592965 NUDT8Q8WV74 236 aa20.88■□□□□ 0.93
MBD3-211ENST00000592965 PKNOX2Q96KN3 472 aa20.88■□□□□ 0.93
MBD3-211ENST00000592965 WFIKKN1Q96NZ8 548 aa20.88■□□□□ 0.93
MBD3-211ENST00000592965 HOXD1Q9GZZ0 328 aa20.88■□□□□ 0.93
MBD3-211ENST00000592965 MCTS1Q9ULC4 181 aaKnown RBP20.88■□□□□ 0.93
MBD3-211ENST00000592965 PROCRQ9UNN8 238 aa20.88■□□□□ 0.93
MBD3-211ENST00000592965 HEATR5AQ86XA9 2040 aa20.87■□□□□ 0.93
MBD3-211ENST00000592965 SERPINE1P05121 402 aa20.87■□□□□ 0.93
MBD3-211ENST00000592965 LINGO3P0C6S8 592 aa20.87■□□□□ 0.93
MBD3-211ENST00000592965 G6PDP11413 515 aa20.87■□□□□ 0.93
MBD3-211ENST00000592965 KLK2P20151 261 aa20.87■□□□□ 0.93
MBD3-211ENST00000592965 EIF1P41567 113 aaKnown RBP20.87■□□□□ 0.93
MBD3-211ENST00000592965 PPP2R2AP63151 447 aa20.87■□□□□ 0.93
MBD3-211ENST00000592965 EMX2Q04743 252 aa20.87■□□□□ 0.93
MBD3-211ENST00000592965 KLHL26Q53HC5 615 aa20.87■□□□□ 0.93
MBD3-211ENST00000592965 DCST2Q5T1A1 773 aa20.87■□□□□ 0.93
MBD3-211ENST00000592965 OR6K3Q8NGY3 331 aa20.87■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms