RNA–Protein interactions for RNA: ENST00000592445.1

PRKCSH-216, Transcript of protein kinase C substrate 80K-H, humanhuman

TSL 2

Gene PRKCSH, Length 598 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-216ENST00000592445 KLHL15Q96M94 604 aa17.43■□□□□ 0.38
PRKCSH-216ENST00000592445 MRPL57Q9BQC6 102 aaKnown RBP17.43■□□□□ 0.38
PRKCSH-216ENST00000592445 LMF2Q9BU23 707 aaKnown RBP17.43■□□□□ 0.38
PRKCSH-216ENST00000592445 MRPL46Q9H2W6 279 aaKnown RBP17.43■□□□□ 0.38
PRKCSH-216ENST00000592445 TIGARQ9NQ88 270 aa17.43■□□□□ 0.38
PRKCSH-216ENST00000592445 MIEF1Q9NQG6 463 aa17.43■□□□□ 0.38
PRKCSH-216ENST00000592445 MED17Q9NVC6 651 aa17.43■□□□□ 0.38
PRKCSH-216ENST00000592445 KLHL13Q9P2N7 655 aa17.43■□□□□ 0.38
PRKCSH-216ENST00000592445 A0A096LNT2 108 aa17.42■□□□□ 0.38
PRKCSH-216ENST00000592445 A8MT66 165 aa17.42■□□□□ 0.38
PRKCSH-216ENST00000592445 UBFD1O14562 309 aaKnown RBP17.42■□□□□ 0.38
PRKCSH-216ENST00000592445 PSMG1O95456 288 aa17.42■□□□□ 0.38
PRKCSH-216ENST00000592445 IGKV1D-16P01601 117 aa17.42■□□□□ 0.38
PRKCSH-216ENST00000592445 PSMA4P25789 261 aaKnown RBP17.42■□□□□ 0.38
PRKCSH-216ENST00000592445 HMOX2P30519 316 aa17.42■□□□□ 0.38
PRKCSH-216ENST00000592445 SFTPDP35247 375 aa17.42■□□□□ 0.38
PRKCSH-216ENST00000592445 GSTM5P46439 218 aa17.42■□□□□ 0.38
PRKCSH-216ENST00000592445 SLC18A2Q05940 514 aa17.42■□□□□ 0.38
PRKCSH-216ENST00000592445 LOXL1Q08397 574 aaPredicted RBP17.42■□□□□ 0.38
PRKCSH-216ENST00000592445 ITGADQ13349 1161 aa17.42■□□□□ 0.38
PRKCSH-216ENST00000592445 ZNF239Q16600 458 aaKnown RBP17.42■□□□□ 0.38
PRKCSH-216ENST00000592445 PRSS53Q2L4Q9 553 aa17.42■□□□□ 0.38
PRKCSH-216ENST00000592445 MMGT1Q8N4V1 131 aa17.42■□□□□ 0.38
PRKCSH-216ENST00000592445 METTL6Q8TCB7 284 aa17.42■□□□□ 0.38
PRKCSH-216ENST00000592445 GPR151Q8TDV0 419 aa17.42■□□□□ 0.38
PRKCSH-216ENST00000592445 PIK3R3Q92569 461 aa17.42■□□□□ 0.38
PRKCSH-216ENST00000592445 ELP4Q96EB1 424 aa17.42■□□□□ 0.38
PRKCSH-216ENST00000592445 SH3YL1Q96HL8 342 aaPredicted RBP17.42■□□□□ 0.38
PRKCSH-216ENST00000592445 C1QTNF3Q9BXJ4 246 aa17.42■□□□□ 0.38
PRKCSH-216ENST00000592445 CACNG6Q9BXT2 260 aa17.42■□□□□ 0.38
PRKCSH-216ENST00000592445 GRID1Q9ULK0 1009 aa17.42■□□□□ 0.38
PRKCSH-216ENST00000592445 ALG1L2C9J202 215 aa17.41■□□□□ 0.38
PRKCSH-216ENST00000592445 PHBP35232 272 aa17.41■□□□□ 0.38
PRKCSH-216ENST00000592445 IRX1P78414 480 aaPredicted RBP17.41■□□□□ 0.38
PRKCSH-216ENST00000592445 SRSF2Q01130 221 aaKnown RBP17.41■□□□□ 0.38
PRKCSH-216ENST00000592445 PPA1Q15181 289 aa17.41■□□□□ 0.38
PRKCSH-216ENST00000592445 TRADDQ15628 312 aa17.41■□□□□ 0.38
PRKCSH-216ENST00000592445 TEX35Q5T0J7 233 aa17.41■□□□□ 0.38
PRKCSH-216ENST00000592445 CYB5R2Q6BCY4 276 aa17.41■□□□□ 0.38
PRKCSH-216ENST00000592445 GALNT18Q6P9A2 607 aa17.41■□□□□ 0.38
PRKCSH-216ENST00000592445 ZDHHC24Q6UX98 284 aa17.41■□□□□ 0.38
PRKCSH-216ENST00000592445 SEZ6L2Q6UXD5 910 aa17.41■□□□□ 0.38
PRKCSH-216ENST00000592445 GPRIN3Q6ZVF9 776 aa17.41■□□□□ 0.38
PRKCSH-216ENST00000592445 TRABD2AQ86V40 505 aa17.41■□□□□ 0.38
PRKCSH-216ENST00000592445 SPATA4Q8NEY3 305 aa17.41■□□□□ 0.38
PRKCSH-216ENST00000592445 OR4C3Q8NH37 302 aa17.41■□□□□ 0.38
PRKCSH-216ENST00000592445 ACTRT2Q8TDY3 377 aa17.41■□□□□ 0.38
PRKCSH-216ENST00000592445 CPNE4Q96A23 557 aaPredicted RBP17.41■□□□□ 0.38
PRKCSH-216ENST00000592445 MUCL1Q96DR8 90 aa17.41■□□□□ 0.38
PRKCSH-216ENST00000592445 RAB17Q9H0T7 212 aa17.41■□□□□ 0.38
PRKCSH-216ENST00000592445 GLIPR2Q9H4G4 154 aa17.41■□□□□ 0.38
PRKCSH-216ENST00000592445 EQTNQ9NQ60 294 aa17.41■□□□□ 0.38
PRKCSH-216ENST00000592445 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP17.4■□□□□ 0.383e-11■■■■□ 23.2
PRKCSH-216ENST00000592445 TTC36A6NLP5 189 aa17.4■□□□□ 0.38
PRKCSH-216ENST00000592445 SHISA9B4DS77 424 aa17.4■□□□□ 0.38
PRKCSH-216ENST00000592445 ABCD4O14678 606 aa17.4■□□□□ 0.38
PRKCSH-216ENST00000592445 PRKD3O94806 890 aa17.4■□□□□ 0.38
PRKCSH-216ENST00000592445 SUPT7LO94864 414 aa17.4■□□□□ 0.38
PRKCSH-216ENST00000592445 OXSR1O95747 527 aaPredicted RBP17.4■□□□□ 0.38
PRKCSH-216ENST00000592445 YES1P07947 543 aa17.4■□□□□ 0.38
PRKCSH-216ENST00000592445 COL6A2P12110 1019 aa17.4■□□□□ 0.38
PRKCSH-216ENST00000592445 HPGDP15428 266 aa17.4■□□□□ 0.38
PRKCSH-216ENST00000592445 SLC25A16P16260 332 aa17.4■□□□□ 0.38
PRKCSH-216ENST00000592445 SRD5A1P18405 259 aa17.4■□□□□ 0.38
PRKCSH-216ENST00000592445 THBS2P35442 1172 aa17.4■□□□□ 0.38
PRKCSH-216ENST00000592445 MAGEA12P43365 314 aa17.4■□□□□ 0.38
PRKCSH-216ENST00000592445 C2orf54Q08AI8 447 aa17.4■□□□□ 0.38
PRKCSH-216ENST00000592445 ZNF763Q0D2J5 394 aa17.4■□□□□ 0.38
PRKCSH-216ENST00000592445 SLC29A2Q14542 456 aa17.4■□□□□ 0.38
PRKCSH-216ENST00000592445 GLE1Q53GS7 698 aaKnown RBP17.4■□□□□ 0.38
PRKCSH-216ENST00000592445 SPDYAQ5MJ70 313 aa17.4■□□□□ 0.38
PRKCSH-216ENST00000592445 TDRPQ86YL5 185 aa17.4■□□□□ 0.38
PRKCSH-216ENST00000592445 POC1BQ8TC44 478 aa17.4■□□□□ 0.38
PRKCSH-216ENST00000592445 AMDHD1Q96NU7 426 aa17.4■□□□□ 0.38
PRKCSH-216ENST00000592445 SRXN1Q9BYN0 137 aa17.4■□□□□ 0.38
PRKCSH-216ENST00000592445 MANSC1Q9H8J5 431 aa17.4■□□□□ 0.38
PRKCSH-216ENST00000592445 CADP27708 2225 aa17.39■□□□□ 0.37
PRKCSH-216ENST00000592445 ELOA3DA6NLF2 546 aaPredicted RBP17.39■□□□□ 0.37
PRKCSH-216ENST00000592445 LYZL6O75951 148 aa17.39■□□□□ 0.37
PRKCSH-216ENST00000592445 INHBAP08476 426 aa17.39■□□□□ 0.37
PRKCSH-216ENST00000592445 ZNF16P17020 682 aaPredicted RBP17.39■□□□□ 0.37
PRKCSH-216ENST00000592445 SHC1P29353 583 aa17.39■□□□□ 0.37
PRKCSH-216ENST00000592445 HTR6P50406 440 aa17.39■□□□□ 0.37
PRKCSH-216ENST00000592445 RAB35Q15286 201 aa17.39■□□□□ 0.37
PRKCSH-216ENST00000592445 ELOA3BQ3SY89 546 aa17.39■□□□□ 0.37
PRKCSH-216ENST00000592445 VPS26BQ4G0F5 336 aa17.39■□□□□ 0.37
PRKCSH-216ENST00000592445 FCRLAQ7L513 359 aa17.39■□□□□ 0.37
PRKCSH-216ENST00000592445 ELOA3Q8NG57 546 aa17.39■□□□□ 0.37
PRKCSH-216ENST00000592445 OR2W6PQ8NHA6 318 aa17.39■□□□□ 0.37
PRKCSH-216ENST00000592445 HTRA1Q92743 480 aa17.39■□□□□ 0.37
PRKCSH-216ENST00000592445 ZNF382Q96SR6 550 aa17.39■□□□□ 0.37
PRKCSH-216ENST00000592445 GP6Q9HCN6 339 aa17.39■□□□□ 0.37
PRKCSH-216ENST00000592445 TAS2R7Q9NYW3 318 aa17.39■□□□□ 0.37
PRKCSH-216ENST00000592445 SVEP1Q4LDE5 3571 aa17.39■□□□□ 0.37
PRKCSH-216ENST00000592445 ALPK2Q86TB3 2170 aa17.38■□□□□ 0.37
PRKCSH-216ENST00000592445 ZNF814B7Z6K7 855 aa17.38■□□□□ 0.37
PRKCSH-216ENST00000592445 LMX1BO60663 402 aa17.38■□□□□ 0.37
PRKCSH-216ENST00000592445 NGFRP08138 427 aa17.38■□□□□ 0.37
PRKCSH-216ENST00000592445 EIF1P41567 113 aaKnown RBP17.38■□□□□ 0.37
PRKCSH-216ENST00000592445 Q6ZT83 130 aa17.38■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 70.9 ms