RNA–Protein interactions for RNA: ENST00000590630.5

LIG3-213, Transcript of DNA ligase 3, humanhuman

TSL 5

Gene LIG3, Length 904 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG3-213ENST00000590630 A0A096LPI6 279 aa10.79□□□□□ -0.68
LIG3-213ENST00000590630 A0A1W2PP18 115 aa10.79□□□□□ -0.68
LIG3-213ENST00000590630 LINC01387J3KSC0 135 aa10.79□□□□□ -0.68
LIG3-213ENST00000590630 KIAA0513O60268 411 aa10.79□□□□□ -0.68
LIG3-213ENST00000590630 FCMRO60667 390 aa10.79□□□□□ -0.68
LIG3-213ENST00000590630 CPN1P15169 458 aa10.79□□□□□ -0.68
LIG3-213ENST00000590630 HK1P19367 917 aa10.79□□□□□ -0.68
LIG3-213ENST00000590630 CAPN3P20807 821 aa10.79□□□□□ -0.68
LIG3-213ENST00000590630 ARFIP2P53365 341 aa10.79□□□□□ -0.68
LIG3-213ENST00000590630 MVDP53602 400 aa10.79□□□□□ -0.68
LIG3-213ENST00000590630 ADORA2A-AS1P86434 159 aa10.79□□□□□ -0.68
LIG3-213ENST00000590630 FUT5Q11128 374 aa10.79□□□□□ -0.68
LIG3-213ENST00000590630 GPR68Q15743 365 aa10.79□□□□□ -0.68
LIG3-213ENST00000590630 CD226Q15762 336 aa10.79□□□□□ -0.68
LIG3-213ENST00000590630 ZNF141Q15928 474 aa10.79□□□□□ -0.68
LIG3-213ENST00000590630 COX20Q5RI15 118 aa10.79□□□□□ -0.68
LIG3-213ENST00000590630 DDX59Q5T1V6 619 aaKnown RBP eCLIP10.79□□□□□ -0.68
LIG3-213ENST00000590630 LRIF1Q5T3J3 769 aa10.79□□□□□ -0.68
LIG3-213ENST00000590630 C1orf185Q5T7R7 199 aa10.79□□□□□ -0.68
LIG3-213ENST00000590630 CGB2Q6NT52 195 aa10.79□□□□□ -0.68
LIG3-213ENST00000590630 B3GNT6Q6ZMB0 384 aa10.79□□□□□ -0.68
LIG3-213ENST00000590630 MRGPRGQ86SM5 289 aa10.79□□□□□ -0.68
LIG3-213ENST00000590630 ULK2Q8IYT8 1036 aa10.79□□□□□ -0.68
LIG3-213ENST00000590630 MARVELD2Q8N4S9 558 aa10.79□□□□□ -0.68
LIG3-213ENST00000590630 PNPT1Q8TCS8 783 aaKnown RBP10.79□□□□□ -0.68
LIG3-213ENST00000590630 PHOSPHO1Q8TCT1 267 aa10.79□□□□□ -0.68
LIG3-213ENST00000590630 TSPEARQ8WU66 669 aa10.79□□□□□ -0.68
LIG3-213ENST00000590630 SFXN2Q96NB2 322 aa10.79□□□□□ -0.68
LIG3-213ENST00000590630 PIGQQ9BRB3 760 aa10.79□□□□□ -0.68
LIG3-213ENST00000590630 PAIP1Q9H074 479 aaKnown RBP10.79□□□□□ -0.68
LIG3-213ENST00000590630 SAP130Q9H0E3 1048 aa10.79□□□□□ -0.68
LIG3-213ENST00000590630 RAD21L1Q9H4I0 556 aa10.79□□□□□ -0.68
LIG3-213ENST00000590630 KLHL14Q9P2G3 628 aa10.79□□□□□ -0.68
LIG3-213ENST00000590630 MKLN1Q9UL63 735 aa10.79□□□□□ -0.68
LIG3-213ENST00000590630 WDR45Q9Y484 360 aa10.79□□□□□ -0.68
LIG3-213ENST00000590630 PCDHB14Q9Y5E9 798 aa10.79□□□□□ -0.68
LIG3-213ENST00000590630 FAM215AQ9Y5M1 114 aa10.79□□□□□ -0.68
LIG3-213ENST00000590630 INTS1Q8N201 2190 aaKnown RBP10.78□□□□□ -0.68
LIG3-213ENST00000590630 NPIPA5A0A0B4J1W7 369 aa10.78□□□□□ -0.68
LIG3-213ENST00000590630 FAM47E-STBD1D6RA91 191 aa10.78□□□□□ -0.68
LIG3-213ENST00000590630 NPIPA7E9PJI5 369 aa10.78□□□□□ -0.68
LIG3-213ENST00000590630 GTPBP1O00178 669 aaKnown RBP10.78□□□□□ -0.68
LIG3-213ENST00000590630 HCRTR2O43614 444 aa10.78□□□□□ -0.68
LIG3-213ENST00000590630 UGT2B17O75795 530 aa10.78□□□□□ -0.68
LIG3-213ENST00000590630 H6PDO95479 791 aa10.78□□□□□ -0.68
LIG3-213ENST00000590630 C1QCP02747 245 aa10.78□□□□□ -0.68
LIG3-213ENST00000590630 NPIPA8P0DM63 369 aa10.78□□□□□ -0.68
LIG3-213ENST00000590630 ZNF17P17021 662 aa10.78□□□□□ -0.68
LIG3-213ENST00000590630 HOXB9P17482 250 aaPredicted RBP10.78□□□□□ -0.68
LIG3-213ENST00000590630 CRATP43155 626 aa10.78□□□□□ -0.68
LIG3-213ENST00000590630 ZNF41P51814 821 aaPredicted RBP10.78□□□□□ -0.68
LIG3-213ENST00000590630 SUMO3P55854 103 aaPredicted RBP10.78□□□□□ -0.68
LIG3-213ENST00000590630 B3GALT5-AS1P59052 145 aa10.78□□□□□ -0.68
LIG3-213ENST00000590630 ZNF117Q03924 483 aa10.78□□□□□ -0.68
LIG3-213ENST00000590630 FADDQ13158 208 aa10.78□□□□□ -0.68
LIG3-213ENST00000590630 BCL2A1Q16548 175 aa10.78□□□□□ -0.68
LIG3-213ENST00000590630 GTDC1Q4AE62 458 aa10.78□□□□□ -0.68
LIG3-213ENST00000590630 GPAT3Q53EU6 434 aa10.78□□□□□ -0.68
LIG3-213ENST00000590630 DCST1Q5T197 706 aa10.78□□□□□ -0.68
LIG3-213ENST00000590630 PDZK1Q5T2W1 519 aa10.78□□□□□ -0.68
LIG3-213ENST00000590630 RAET1LQ5VY80 246 aa10.78□□□□□ -0.68
LIG3-213ENST00000590630 RTL6Q6ICC9 239 aa10.78□□□□□ -0.68
LIG3-213ENST00000590630 TYW3Q6IPR3 259 aaKnown RBP10.78□□□□□ -0.68
LIG3-213ENST00000590630 FRRS1Q6ZNA5 592 aa10.78□□□□□ -0.68
LIG3-213ENST00000590630 MAMDC2Q7Z304 686 aaPredicted RBP10.78□□□□□ -0.68
LIG3-213ENST00000590630 ZNF619Q8N2I2 560 aa10.78□□□□□ -0.68
LIG3-213ENST00000590630 ZNF614Q8N883 585 aa10.78□□□□□ -0.68
LIG3-213ENST00000590630 B4GALNT2Q8NHY0 566 aa10.78□□□□□ -0.68
LIG3-213ENST00000590630 RND1Q92730 232 aa10.78□□□□□ -0.68
LIG3-213ENST00000590630 PMM1Q92871 262 aa10.78□□□□□ -0.68
LIG3-213ENST00000590630 AURKBQ96GD4 344 aaPredicted RBP10.78□□□□□ -0.68
LIG3-213ENST00000590630 WDYHV1Q96HA8 205 aa10.78□□□□□ -0.68
LIG3-213ENST00000590630 SH3YL1Q96HL8 342 aaPredicted RBP10.78□□□□□ -0.68
LIG3-213ENST00000590630 TTYH2Q9BSA4 534 aa10.78□□□□□ -0.68
LIG3-213ENST00000590630 ALKBH4Q9NXW9 302 aa10.78□□□□□ -0.68
LIG3-213ENST00000590630 COQ3Q9NZJ6 369 aa10.78□□□□□ -0.68
LIG3-213ENST00000590630 P2RX2Q9UBL9 471 aa10.78□□□□□ -0.68
LIG3-213ENST00000590630 CAMK2AQ9UQM7 478 aa10.78□□□□□ -0.68
LIG3-213ENST00000590630 RPH3AQ9Y2J0 694 aaPredicted RBP10.78□□□□□ -0.68
LIG3-213ENST00000590630 GMEB1Q9Y692 573 aa10.78□□□□□ -0.68
LIG3-213ENST00000590630 PRAMEF27A3QJZ7 478 aa10.77□□□□□ -0.69
LIG3-213ENST00000590630 C7orf72A4D263 438 aa10.77□□□□□ -0.69
LIG3-213ENST00000590630 SERINC4A6NH21 518 aa10.77□□□□□ -0.69
LIG3-213ENST00000590630 CLIC1O00299 241 aa10.77□□□□□ -0.69
LIG3-213ENST00000590630 ANGPT2O15123 496 aa10.77□□□□□ -0.69
LIG3-213ENST00000590630 ZNF264O43296 627 aa10.77□□□□□ -0.69
LIG3-213ENST00000590630 GMFGO60234 142 aa10.77□□□□□ -0.69
LIG3-213ENST00000590630 EIF4E2O60573 245 aaKnown RBP10.77□□□□□ -0.69
LIG3-213ENST00000590630 TNFRSF21O75509 655 aa10.77□□□□□ -0.69
LIG3-213ENST00000590630 CLDN1O95832 211 aa10.77□□□□□ -0.69
LIG3-213ENST00000590630 GLI4P10075 376 aa10.77□□□□□ -0.69
LIG3-213ENST00000590630 NR2F1P10589 423 aa10.77□□□□□ -0.69
LIG3-213ENST00000590630 UBL4AP11441 157 aa10.77□□□□□ -0.69
LIG3-213ENST00000590630 ETFAP13804 333 aa10.77□□□□□ -0.69
LIG3-213ENST00000590630 ZNF708P17019 499 aa10.77□□□□□ -0.69
LIG3-213ENST00000590630 TCEA1P23193 301 aaKnown RBP10.77□□□□□ -0.69
LIG3-213ENST00000590630 PPIBP23284 216 aaKnown RBP10.77□□□□□ -0.69
LIG3-213ENST00000590630 ADH7P40394 386 aa10.77□□□□□ -0.69
LIG3-213ENST00000590630 LHX2P50458 406 aa10.77□□□□□ -0.69
LIG3-213ENST00000590630 P2RX1P51575 399 aa10.77□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms