RNA–Protein interactions for RNA: ENST00000590347.5

CIRBP-228, Transcript of cold inducible RNA binding protein, humanhuman

TSL 2

Gene CIRBP, Length 3,117 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-228ENST00000590347 ZSWIM8A7E2V4 1837 aa14.2□□□□□ -0.14
CIRBP-228ENST00000590347 PMS2P1A4D2B8 440 aa14.19□□□□□ -0.14
CIRBP-228ENST00000590347 REM1O75628 298 aa14.19□□□□□ -0.14
CIRBP-228ENST00000590347 ZNF7P17097 686 aaPredicted RBP14.19□□□□□ -0.14
CIRBP-228ENST00000590347 RFC3P40938 356 aa14.19□□□□□ -0.14
CIRBP-228ENST00000590347 MAGEB1P43366 347 aa14.19□□□□□ -0.14
CIRBP-228ENST00000590347 MAPK9P45984 424 aa14.19□□□□□ -0.14
CIRBP-228ENST00000590347 LHX1P48742 406 aa14.19□□□□□ -0.14
CIRBP-228ENST00000590347 DGKGP49619 791 aa14.19□□□□□ -0.14
CIRBP-228ENST00000590347 CCR8P51685 355 aa14.19□□□□□ -0.14
CIRBP-228ENST00000590347 TDGQ13569 410 aa14.19□□□□□ -0.14
CIRBP-228ENST00000590347 LINC00303Q3SY05 128 aa14.19□□□□□ -0.14
CIRBP-228ENST00000590347 XKR4Q5GH76 650 aa14.19□□□□□ -0.14
CIRBP-228ENST00000590347 SMARCD3Q6STE5 483 aa14.19□□□□□ -0.14
CIRBP-228ENST00000590347 ZSCAN2Q7Z7L9 614 aaPredicted RBP14.19□□□□□ -0.14
CIRBP-228ENST00000590347 SERINC5Q86VE9 423 aa14.19□□□□□ -0.14
CIRBP-228ENST00000590347 OR5T2Q8NGG2 359 aa14.19□□□□□ -0.14
CIRBP-228ENST00000590347 GLYATL2Q8WU03 294 aa14.19□□□□□ -0.14
CIRBP-228ENST00000590347 NR4A3Q92570 626 aa14.19□□□□□ -0.14
CIRBP-228ENST00000590347 POP5Q969H6 163 aaKnown RBP14.19□□□□□ -0.14
CIRBP-228ENST00000590347 PBX4Q9BYU1 374 aa14.19□□□□□ -0.14
CIRBP-228ENST00000590347 MFFQ9GZY8 342 aa14.19□□□□□ -0.14
CIRBP-228ENST00000590347 RDH14Q9HBH5 336 aa14.19□□□□□ -0.14
CIRBP-228ENST00000590347 NOX3Q9HBY0 568 aa14.19□□□□□ -0.14
CIRBP-228ENST00000590347 AK6Q9Y3D8 172 aaKnown RBP14.19□□□□□ -0.14
CIRBP-228ENST00000590347 KCNE1BA0A087WTH5 132 aa14.19□□□□□ -0.14
CIRBP-228ENST00000590347 KHDRBS3O75525 346 aaKnown RBP14.19□□□□□ -0.14
CIRBP-228ENST00000590347 PPP3CBP16298 524 aa14.19□□□□□ -0.14
CIRBP-228ENST00000590347 AOAHP28039 575 aa14.19□□□□□ -0.14
CIRBP-228ENST00000590347 PPT1P50897 306 aa14.19□□□□□ -0.14
CIRBP-228ENST00000590347 RAE1P78406 368 aaKnown RBP14.19□□□□□ -0.14
CIRBP-228ENST00000590347 PDZK1IP1Q13113 114 aa14.19□□□□□ -0.14
CIRBP-228ENST00000590347 CARNMT1Q8N4J0 409 aa14.19□□□□□ -0.14
CIRBP-228ENST00000590347 FAM26EQ8N5C1 309 aa14.19□□□□□ -0.14
CIRBP-228ENST00000590347 HORMAD2Q8N7B1 307 aa14.19□□□□□ -0.14
CIRBP-228ENST00000590347 ZNF671Q8TAW3 534 aa14.19□□□□□ -0.14
CIRBP-228ENST00000590347 ARSGQ96EG1 525 aa14.19□□□□□ -0.14
CIRBP-228ENST00000590347 C11orf49Q9H6J7 331 aa14.19□□□□□ -0.14
CIRBP-228ENST00000590347 TMEM185BQ9H7F4 350 aa14.19□□□□□ -0.14
CIRBP-228ENST00000590347 POT1Q9NUX5 634 aa14.19□□□□□ -0.14
CIRBP-228ENST00000590347 METTL21EPA6NDL7 271 aa14.19□□□□□ -0.14
CIRBP-228ENST00000590347 OR6C76A6NM76 312 aa14.19□□□□□ -0.14
CIRBP-228ENST00000590347 DPM1O60762 260 aa14.19□□□□□ -0.14
CIRBP-228ENST00000590347 CDC123O75794 336 aaPredicted RBP14.19□□□□□ -0.14
CIRBP-228ENST00000590347 FARS2O95363 451 aaKnown RBP14.19□□□□□ -0.14
CIRBP-228ENST00000590347 RBMS1P29558 406 aaKnown RBP14.19□□□□□ -0.14
CIRBP-228ENST00000590347 DCTDP32321 178 aa14.19□□□□□ -0.14
CIRBP-228ENST00000590347 LUMP51884 338 aaPredicted RBP14.19□□□□□ -0.14
CIRBP-228ENST00000590347 HMGA2P52926 109 aa14.19□□□□□ -0.14
CIRBP-228ENST00000590347 HTRA3P83110 453 aa14.19□□□□□ -0.14
CIRBP-228ENST00000590347 TUSC3Q13454 348 aa14.19□□□□□ -0.14
CIRBP-228ENST00000590347 OCLNQ16625 522 aa14.19□□□□□ -0.14
CIRBP-228ENST00000590347 CD200R1LQ6Q8B3 271 aa14.19□□□□□ -0.14
CIRBP-228ENST00000590347 SLITRK4Q8IW52 837 aa14.19□□□□□ -0.14
CIRBP-228ENST00000590347 OR1S2Q8NGQ3 325 aa14.19□□□□□ -0.14
CIRBP-228ENST00000590347 OR52I2Q8NH67 350 aa14.19□□□□□ -0.14
CIRBP-228ENST00000590347 GNPDA2Q8TDQ7 276 aa14.19□□□□□ -0.14
CIRBP-228ENST00000590347 ECHDC3Q96DC8 303 aa14.19□□□□□ -0.14
CIRBP-228ENST00000590347 PPP1R16AQ96I34 528 aa14.19□□□□□ -0.14
CIRBP-228ENST00000590347 ENKD1Q9H0I2 346 aa14.19□□□□□ -0.14
CIRBP-228ENST00000590347 MED11Q9P086 117 aa14.19□□□□□ -0.14
CIRBP-228ENST00000590347 ZNF230Q9UIE0 474 aaPredicted RBP14.19□□□□□ -0.14
CIRBP-228ENST00000590347 GBF1Q92538 1859 aa14.19□□□□□ -0.14
CIRBP-228ENST00000590347 TMEM129A0AVI4 362 aa14.18□□□□□ -0.14
CIRBP-228ENST00000590347 MEIS3P1A6NDR6 274 aa14.18□□□□□ -0.14
CIRBP-228ENST00000590347 ANTXRLA6NF34 631 aa14.18□□□□□ -0.14
CIRBP-228ENST00000590347 ANKRD61A6NGH8 418 aa14.18□□□□□ -0.14
CIRBP-228ENST00000590347 MPTX1A8MV57 137 aa14.18□□□□□ -0.14
CIRBP-228ENST00000590347 HTR3BO95264 441 aa14.18□□□□□ -0.14
CIRBP-228ENST00000590347 CLDN7O95471 211 aa14.18□□□□□ -0.14
CIRBP-228ENST00000590347 HOXD9P28356 352 aaPredicted RBP14.18□□□□□ -0.14
CIRBP-228ENST00000590347 BLOC1S1P78537 153 aa14.18□□□□□ -0.14
CIRBP-228ENST00000590347 TRAM2Q15035 370 aa14.18□□□□□ -0.14
CIRBP-228ENST00000590347 UPP1Q16831 310 aa14.18□□□□□ -0.14
CIRBP-228ENST00000590347 ZNF683Q8IZ20 524 aa14.18□□□□□ -0.14
CIRBP-228ENST00000590347 SIRT6Q8N6T7 355 aa14.18□□□□□ -0.14
CIRBP-228ENST00000590347 C17orf47Q8NEP4 570 aa14.18□□□□□ -0.14
CIRBP-228ENST00000590347 PFDN5Q99471 154 aa14.18□□□□□ -0.14
CIRBP-228ENST00000590347 YIPF4Q9BSR8 244 aa14.18□□□□□ -0.14
CIRBP-228ENST00000590347 HRASLSQ9HDD0 168 aa14.18□□□□□ -0.14
CIRBP-228ENST00000590347 C2orf42Q9NWW7 574 aa14.18□□□□□ -0.14
CIRBP-228ENST00000590347 ASB4Q9Y574 426 aa14.18□□□□□ -0.14
CIRBP-228ENST00000590347 ALPK2Q86TB3 2170 aa14.18□□□□□ -0.14
CIRBP-228ENST00000590347 RNF13O43567 381 aa14.18□□□□□ -0.14
CIRBP-228ENST00000590347 SULT1B1O43704 296 aa14.18□□□□□ -0.14
CIRBP-228ENST00000590347 GALR3O60755 368 aaPredicted RBP14.18□□□□□ -0.14
CIRBP-228ENST00000590347 PRAMEF2O60811 474 aa14.18□□□□□ -0.14
CIRBP-228ENST00000590347 OLFM2O95897 454 aa14.18□□□□□ -0.14
CIRBP-228ENST00000590347 TGFB1P01137 390 aa14.18□□□□□ -0.14
CIRBP-228ENST00000590347 ATF1P18846 271 aa14.18□□□□□ -0.14
CIRBP-228ENST00000590347 PSMB1P20618 241 aaKnown RBP14.18□□□□□ -0.14
CIRBP-228ENST00000590347 C4BPBP20851 252 aa14.18□□□□□ -0.14
CIRBP-228ENST00000590347 OR1G1P47890 313 aa14.18□□□□□ -0.14
CIRBP-228ENST00000590347 KCNJ5P48544 419 aa14.18□□□□□ -0.14
CIRBP-228ENST00000590347 LRRTM1Q86UE6 522 aa14.18□□□□□ -0.14
CIRBP-228ENST00000590347 TMEM19Q96HH6 336 aa14.18□□□□□ -0.14
CIRBP-228ENST00000590347 MICU1Q9BPX6 476 aa14.18□□□□□ -0.14
CIRBP-228ENST00000590347 POLDIP3Q9BY77 421 aaKnown RBP14.18□□□□□ -0.14
CIRBP-228ENST00000590347 ANKRD19PQ9H560 264 aa14.18□□□□□ -0.14
CIRBP-228ENST00000590347 FKRPQ9H9S5 495 aa14.18□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 54.2 ms