RNA–Protein interactions for RNA: ENST00000590098.1

PRKCSH-211, Transcript of protein kinase C substrate 80K-H, humanhuman

TSL 2

Gene PRKCSH, Length 795 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-211ENST00000590098 LTBQ06643 244 aa16.09■□□□□ 0.17
PRKCSH-211ENST00000590098 DUSP5Q16690 384 aa16.09■□□□□ 0.17
PRKCSH-211ENST00000590098 CPTPQ5TA50 214 aa16.09■□□□□ 0.17
PRKCSH-211ENST00000590098 LRIG3Q6UXM1 1119 aa16.09■□□□□ 0.17
PRKCSH-211ENST00000590098 MISPQ8IVT2 679 aa16.09■□□□□ 0.17
PRKCSH-211ENST00000590098 CHMP6Q96FZ7 201 aa16.09■□□□□ 0.17
PRKCSH-211ENST00000590098 C16orf58Q96GQ5 468 aa16.09■□□□□ 0.17
PRKCSH-211ENST00000590098 SH3YL1Q96HL8 342 aaPredicted RBP16.09■□□□□ 0.17
PRKCSH-211ENST00000590098 EML4Q9HC35 981 aaKnown RBP16.09■□□□□ 0.17
PRKCSH-211ENST00000590098 PLSCR4Q9NRQ2 329 aa16.09■□□□□ 0.17
PRKCSH-211ENST00000590098 CLEC4AQ9UMR7 237 aa16.09■□□□□ 0.17
PRKCSH-211ENST00000590098 ABCA2Q9BZC7 2435 aa16.08■□□□□ 0.17
PRKCSH-211ENST00000590098 A0A1W2PRB8 838 aa16.08■□□□□ 0.16
PRKCSH-211ENST00000590098 C7orf72A4D263 438 aa16.08■□□□□ 0.16
PRKCSH-211ENST00000590098 FAM171A2A8MVW0 826 aa16.08■□□□□ 0.16
PRKCSH-211ENST00000590098 TMEM114B3SHH9 223 aa16.08■□□□□ 0.16
PRKCSH-211ENST00000590098 SS18L1O75177 396 aaPredicted RBP16.08■□□□□ 0.16
PRKCSH-211ENST00000590098 OPN1LWP04000 364 aa16.08■□□□□ 0.16
PRKCSH-211ENST00000590098 BCKDHAP12694 445 aa16.08■□□□□ 0.16
PRKCSH-211ENST00000590098 PPP3CBP16298 524 aa16.08■□□□□ 0.16
PRKCSH-211ENST00000590098 EFNA1P20827 205 aaPredicted RBP16.08■□□□□ 0.16
PRKCSH-211ENST00000590098 Q5PR19 223 aa16.08■□□□□ 0.16
PRKCSH-211ENST00000590098 PDSS1Q5T2R2 415 aa16.08■□□□□ 0.16
PRKCSH-211ENST00000590098 CLEC9AQ6UXN8 241 aa16.08■□□□□ 0.16
PRKCSH-211ENST00000590098 C20orf204Q6ZNR8 217 aa16.08■□□□□ 0.16
PRKCSH-211ENST00000590098 ESPNLQ6ZVH7 1005 aa16.08■□□□□ 0.16
PRKCSH-211ENST00000590098 Q71RC1 249 aaPredicted RBP16.08■□□□□ 0.16
PRKCSH-211ENST00000590098 ZAR1Q86SH2 424 aa16.08■□□□□ 0.16
PRKCSH-211ENST00000590098 B4GALNT2Q8NHY0 566 aa16.08■□□□□ 0.16
PRKCSH-211ENST00000590098 RNF145Q96MT1 663 aa16.08■□□□□ 0.16
PRKCSH-211ENST00000590098 GLRX2Q9NS18 164 aa16.08■□□□□ 0.16
PRKCSH-211ENST00000590098 ZCCHC3Q9NUD5 404 aaKnown RBP16.08■□□□□ 0.16
PRKCSH-211ENST00000590098 MED17Q9NVC6 651 aa16.08■□□□□ 0.16
PRKCSH-211ENST00000590098 TRAF6Q9Y4K3 522 aa16.08■□□□□ 0.16
PRKCSH-211ENST00000590098 NUP214P35658 2090 aaPredicted RBP16.07■□□□□ 0.16
PRKCSH-211ENST00000590098 TLDC2A0PJX2 215 aa16.07■□□□□ 0.16
PRKCSH-211ENST00000590098 TNFSF11O14788 317 aa16.07■□□□□ 0.16
PRKCSH-211ENST00000590098 ADAMDEC1O15204 470 aa16.07■□□□□ 0.16
PRKCSH-211ENST00000590098 CXCL13O43927 109 aa16.07■□□□□ 0.16
PRKCSH-211ENST00000590098 FGF4P08620 206 aa16.07■□□□□ 0.16
PRKCSH-211ENST00000590098 IL11P20809 199 aa16.07■□□□□ 0.16
PRKCSH-211ENST00000590098 MAPK1P28482 360 aa16.07■□□□□ 0.16
PRKCSH-211ENST00000590098 RPL3P39023 403 aaKnown RBP16.07■□□□□ 0.16
PRKCSH-211ENST00000590098 POU6F2P78424 691 aaPredicted RBP16.07■□□□□ 0.16
PRKCSH-211ENST00000590098 MLC1Q15049 377 aa16.07■□□□□ 0.16
PRKCSH-211ENST00000590098 PLPPR5Q32ZL2 321 aa16.07■□□□□ 0.16
PRKCSH-211ENST00000590098 CCNJQ5T5M9 372 aa16.07■□□□□ 0.16
PRKCSH-211ENST00000590098 HBMQ6B0K9 141 aa16.07■□□□□ 0.16
PRKCSH-211ENST00000590098 GTF2IRD2BQ6EKJ0 949 aa16.07■□□□□ 0.16
PRKCSH-211ENST00000590098 GTF2IRD2Q86UP8 949 aa16.07■□□□□ 0.16
PRKCSH-211ENST00000590098 STK32CQ86UX6 486 aa16.07■□□□□ 0.16
PRKCSH-211ENST00000590098 LRRN4CLQ8ND94 238 aa16.07■□□□□ 0.16
PRKCSH-211ENST00000590098 OR2V1Q8NHB1 315 aa16.07■□□□□ 0.16
PRKCSH-211ENST00000590098 TWIST2Q8WVJ9 160 aa16.07■□□□□ 0.16
PRKCSH-211ENST00000590098 FAM120BQ96EK7 910 aaKnown RBP16.07■□□□□ 0.16
PRKCSH-211ENST00000590098 OTUB1Q96FW1 271 aaPredicted RBP16.07■□□□□ 0.16
PRKCSH-211ENST00000590098 ADGRG7Q96K78 797 aa16.07■□□□□ 0.16
PRKCSH-211ENST00000590098 MARK4Q96L34 752 aa16.07■□□□□ 0.16
PRKCSH-211ENST00000590098 HS3ST6Q96QI5 342 aa16.07■□□□□ 0.16
PRKCSH-211ENST00000590098 BTBD2Q9BX70 525 aa16.07■□□□□ 0.16
PRKCSH-211ENST00000590098 TMEM185BQ9H7F4 350 aa16.07■□□□□ 0.16
PRKCSH-211ENST00000590098 FBXO34Q9NWN3 711 aa16.07■□□□□ 0.16
PRKCSH-211ENST00000590098 SNX8Q9Y5X2 465 aa16.07■□□□□ 0.16
PRKCSH-211ENST00000590098 A0A1W2PQD3 144 aa16.06■□□□□ 0.16
PRKCSH-211ENST00000590098 TMEM233B4DJY2 109 aa16.06■□□□□ 0.16
PRKCSH-211ENST00000590098 PIP5K1BO14986 540 aa16.06■□□□□ 0.16
PRKCSH-211ENST00000590098 NPHS1O60500 1241 aa16.06■□□□□ 0.16
PRKCSH-211ENST00000590098 HMGN2P05204 90 aaKnown RBP16.06■□□□□ 0.16
PRKCSH-211ENST00000590098 CHRNGP07510 517 aa16.06■□□□□ 0.16
PRKCSH-211ENST00000590098 ATP6V1C1P21283 382 aa16.06■□□□□ 0.16
PRKCSH-211ENST00000590098 PSMA4P25789 261 aaKnown RBP16.06■□□□□ 0.16
PRKCSH-211ENST00000590098 ALDH3A1P30838 453 aa16.06■□□□□ 0.16
PRKCSH-211ENST00000590098 CARD18P57730 90 aa16.06■□□□□ 0.16
PRKCSH-211ENST00000590098 LASP1Q14847 261 aaKnown RBP16.06■□□□□ 0.16
PRKCSH-211ENST00000590098 CTU2Q2VPK5 515 aaKnown RBP16.06■□□□□ 0.16
PRKCSH-211ENST00000590098 ARL13AQ5H913 290 aaPredicted RBP16.06■□□□□ 0.16
PRKCSH-211ENST00000590098 BEX5Q5H9J7 111 aa16.06■□□□□ 0.16
PRKCSH-211ENST00000590098 PRSS57Q6UWY2 283 aa16.06■□□□□ 0.16
PRKCSH-211ENST00000590098 BEND4Q6ZU67 534 aa16.06■□□□□ 0.16
PRKCSH-211ENST00000590098 C22orf34Q6ZV56 151 aa16.06■□□□□ 0.16
PRKCSH-211ENST00000590098 TRABD2AQ86V40 505 aa16.06■□□□□ 0.16
PRKCSH-211ENST00000590098 LILRA2Q8N149 483 aa16.06■□□□□ 0.16
PRKCSH-211ENST00000590098 APOPT1Q96IL0 206 aa16.06■□□□□ 0.16
PRKCSH-211ENST00000590098 PPP3R2Q96LZ3 170 aa16.06■□□□□ 0.16
PRKCSH-211ENST00000590098 STACQ99469 402 aa16.06■□□□□ 0.16
PRKCSH-211ENST00000590098 NPAS1Q99742 590 aa16.06■□□□□ 0.16
PRKCSH-211ENST00000590098 DUSP22Q9NRW4 184 aa16.06■□□□□ 0.16
PRKCSH-211ENST00000590098 ATP6V1HQ9UI12 483 aa16.06■□□□□ 0.16
PRKCSH-211ENST00000590098 TLN2Q9Y4G6 2542 aa16.05■□□□□ 0.16
PRKCSH-211ENST00000590098 A0A0J9YW62 118 aa16.05■□□□□ 0.16
PRKCSH-211ENST00000590098 H3BNH8 94 aa16.05■□□□□ 0.16
PRKCSH-211ENST00000590098 SCAMP2O15127 329 aaKnown RBP16.05■□□□□ 0.16
PRKCSH-211ENST00000590098 TUBBP07437 444 aa16.05■□□□□ 0.16
PRKCSH-211ENST00000590098 PABPC4LP0CB38 370 aaKnown RBP16.05■□□□□ 0.16
PRKCSH-211ENST00000590098 EIF1P41567 113 aaKnown RBP16.05■□□□□ 0.16
PRKCSH-211ENST00000590098 UGT3A2Q3SY77 523 aa16.05■□□□□ 0.16
PRKCSH-211ENST00000590098 STAC2Q6ZMT1 411 aa16.05■□□□□ 0.16
PRKCSH-211ENST00000590098 PLEKHM3Q6ZWE6 761 aa16.05■□□□□ 0.16
PRKCSH-211ENST00000590098 MTERF4Q7Z6M4 381 aaKnown RBP16.05■□□□□ 0.16
PRKCSH-211ENST00000590098 YTHDF3Q7Z739 585 aaKnown RBP16.05■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms