RNA–Protein interactions for RNA: ENST00000589933.1

TMC6-213, Transcript of transmembrane channel like 6, human

TSL 3

Gene TMC6, Length 580 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TMC6-213	ENST00000589933	ZNF527	Q8NB42	609 aa		18.92	■□□□□ 0.62
TMC6-213	ENST00000589933	SLC16A11	Q8NCK7	471 aa		18.92	■□□□□ 0.62
TMC6-213	ENST00000589933	CLHC1	Q8NHS4	586 aa		18.92	■□□□□ 0.62
TMC6-213	ENST00000589933	DGCR8	Q8WYQ5	773 aa	Known RBP eCLIP	18.92	■□□□□ 0.62
TMC6-213	ENST00000589933	FCRL1	Q96LA6	429 aa		18.92	■□□□□ 0.62
TMC6-213	ENST00000589933	PPP3R2	Q96LZ3	170 aa		18.92	■□□□□ 0.62
TMC6-213	ENST00000589933	GATA5	Q9BWX5	397 aa	Predicted RBP	18.92	■□□□□ 0.62
TMC6-213	ENST00000589933	ZCCHC3	Q9NUD5	404 aa	Known RBP	18.92	■□□□□ 0.62
TMC6-213	ENST00000589933	BAIAP2L1	Q9UHR4	511 aa		18.92	■□□□□ 0.62
TMC6-213	ENST00000589933	PTGDR2	Q9Y5Y4	395 aa		18.92	■□□□□ 0.62
TMC6-213	ENST00000589933		A0A1W2PQD3	144 aa		18.91	■□□□□ 0.62
TMC6-213	ENST00000589933		A0A1W2PRB8	838 aa		18.91	■□□□□ 0.62
TMC6-213	ENST00000589933		H3BNH8	94 aa		18.91	■□□□□ 0.62
TMC6-213	ENST00000589933	ACP2	P11117	423 aa		18.91	■□□□□ 0.62
TMC6-213	ENST00000589933	IL11	P20809	199 aa		18.91	■□□□□ 0.62
TMC6-213	ENST00000589933	GUSBP1	Q15486	140 aa		18.91	■□□□□ 0.62
TMC6-213	ENST00000589933	KANK2	Q63ZY3	851 aa		18.91	■□□□□ 0.62
TMC6-213	ENST00000589933	GALNT10	Q86SR1	603 aa		18.91	■□□□□ 0.62
TMC6-213	ENST00000589933	OR2V1	Q8NHB1	315 aa		18.91	■□□□□ 0.62
TMC6-213	ENST00000589933	B4GALNT2	Q8NHY0	566 aa		18.91	■□□□□ 0.62
TMC6-213	ENST00000589933	FBXO30	Q8TB52	745 aa		18.91	■□□□□ 0.62
TMC6-213	ENST00000589933	FAM110B	Q8TC76	370 aa		18.91	■□□□□ 0.62
TMC6-213	ENST00000589933	EPS8L3	Q8TE67	593 aa	Known RBP	18.91	■□□□□ 0.62
TMC6-213	ENST00000589933	SH3YL1	Q96HL8	342 aa	Predicted RBP	18.91	■□□□□ 0.62
TMC6-213	ENST00000589933	STAC	Q99469	402 aa		18.91	■□□□□ 0.62
TMC6-213	ENST00000589933	BTBD2	Q9BX70	525 aa		18.91	■□□□□ 0.62
TMC6-213	ENST00000589933	HOXD1	Q9GZZ0	328 aa		18.91	■□□□□ 0.62
TMC6-213	ENST00000589933	MED17	Q9NVC6	651 aa		18.91	■□□□□ 0.62
TMC6-213	ENST00000589933	ATAD3A	Q9NVI7	634 aa		18.91	■□□□□ 0.62
TMC6-213	ENST00000589933	DNAJC15	Q9Y5T4	150 aa		18.91	■□□□□ 0.62
TMC6-213	ENST00000589933	GIMAP1-GIMAP5	A0A087WTJ2	511 aa		18.9	■□□□□ 0.62
TMC6-213	ENST00000589933	GJE1	A6NN92	205 aa		18.9	■□□□□ 0.62
TMC6-213	ENST00000589933	SHISA8	B8ZZ34	492 aa		18.9	■□□□□ 0.62
TMC6-213	ENST00000589933	LSM1	O15116	133 aa	Known RBP	18.9	■□□□□ 0.62
TMC6-213	ENST00000589933	NPHS1	O60500	1241 aa		18.9	■□□□□ 0.62
TMC6-213	ENST00000589933	SS18L1	O75177	396 aa	Predicted RBP	18.9	■□□□□ 0.62
TMC6-213	ENST00000589933	TUBB	P07437	444 aa		18.9	■□□□□ 0.62
TMC6-213	ENST00000589933	FGF4	P08620	206 aa		18.9	■□□□□ 0.62
TMC6-213	ENST00000589933	KRT16	P08779	473 aa		18.9	■□□□□ 0.62
TMC6-213	ENST00000589933	CCKAR	P32238	428 aa		18.9	■□□□□ 0.62
TMC6-213	ENST00000589933	NR1H2	P55055	460 aa		18.9	■□□□□ 0.62
TMC6-213	ENST00000589933	PCLAF	Q15004	111 aa		18.9	■□□□□ 0.62
TMC6-213	ENST00000589933	MLC1	Q15049	377 aa		18.9	■□□□□ 0.62
TMC6-213	ENST00000589933	DUSP5	Q16690	384 aa		18.9	■□□□□ 0.62
TMC6-213	ENST00000589933	PLPPR5	Q32ZL2	321 aa		18.9	■□□□□ 0.62
TMC6-213	ENST00000589933	ZNF385B	Q569K4	471 aa		18.9	■□□□□ 0.62
TMC6-213	ENST00000589933	ANKRD34A	Q69YU3	496 aa		18.9	■□□□□ 0.62
TMC6-213	ENST00000589933	HBM	Q6B0K9	141 aa		18.9	■□□□□ 0.62
TMC6-213	ENST00000589933	MTERF4	Q7Z6M4	381 aa	Known RBP	18.9	■□□□□ 0.62
TMC6-213	ENST00000589933	OR2T11	Q8NH01	316 aa		18.9	■□□□□ 0.62
TMC6-213	ENST00000589933	TWIST2	Q8WVJ9	160 aa		18.9	■□□□□ 0.62
TMC6-213	ENST00000589933	GIMAP5	Q96F15	307 aa		18.9	■□□□□ 0.62
TMC6-213	ENST00000589933	RNF145	Q96MT1	663 aa		18.9	■□□□□ 0.62
TMC6-213	ENST00000589933	PRPF18	Q99633	342 aa	Known RBP	18.9	■□□□□ 0.62
TMC6-213	ENST00000589933	C12orf65	Q9H3J6	166 aa	Known RBP	18.9	■□□□□ 0.62
TMC6-213	ENST00000589933	DUSP22	Q9NRW4	184 aa		18.9	■□□□□ 0.62
TMC6-213	ENST00000589933	FAF1	Q9UNN5	650 aa	Predicted RBP	18.9	■□□□□ 0.62
TMC6-213	ENST00000589933	TRAF6	Q9Y4K3	522 aa		18.9	■□□□□ 0.62
TMC6-213	ENST00000589933	SNX8	Q9Y5X2	465 aa		18.9	■□□□□ 0.62
TMC6-213	ENST00000589933	TLDC2	A0PJX2	215 aa		18.89	■□□□□ 0.61
TMC6-213	ENST00000589933	TNFSF11	O14788	317 aa		18.89	■□□□□ 0.61
TMC6-213	ENST00000589933	ADAMDEC1	O15204	470 aa		18.89	■□□□□ 0.61
TMC6-213	ENST00000589933	SIAH2	O43255	324 aa		18.89	■□□□□ 0.61
TMC6-213	ENST00000589933	CXCL13	O43927	109 aa		18.89	■□□□□ 0.61
TMC6-213	ENST00000589933	NUDT14	O95848	222 aa		18.89	■□□□□ 0.61
TMC6-213	ENST00000589933	CARD18	P57730	90 aa		18.89	■□□□□ 0.61
TMC6-213	ENST00000589933	LSM12	Q3MHD2	195 aa	Known RBP	18.89	■□□□□ 0.61
TMC6-213	ENST00000589933	PLEKHM3	Q6ZWE6	761 aa		18.89	■□□□□ 0.61
TMC6-213	ENST00000589933	TRABD2A	Q86V40	505 aa		18.89	■□□□□ 0.61
TMC6-213	ENST00000589933	RIBC1	Q8N443	379 aa	Predicted RBP	18.89	■□□□□ 0.61
TMC6-213	ENST00000589933	TRIM44	Q96DX7	344 aa	Predicted RBP	18.89	■□□□□ 0.61
TMC6-213	ENST00000589933	APOPT1	Q96IL0	206 aa		18.89	■□□□□ 0.61
TMC6-213	ENST00000589933	OR10A4	Q9H209	315 aa		18.89	■□□□□ 0.61
TMC6-213	ENST00000589933	GIN1	Q9NXP7	522 aa		18.89	■□□□□ 0.61
TMC6-213	ENST00000589933	CLEC4A	Q9UMR7	237 aa		18.89	■□□□□ 0.61
TMC6-213	ENST00000589933	NF1	P21359	2839 aa		18.88	■□□□□ 0.61
TMC6-213	ENST00000589933	LYPLA1	O75608	230 aa	Predicted RBP	18.88	■□□□□ 0.61
TMC6-213	ENST00000589933	HMGN2	P05204	90 aa	Known RBP	18.88	■□□□□ 0.61
TMC6-213	ENST00000589933	BCKDHA	P12694	445 aa		18.88	■□□□□ 0.61
TMC6-213	ENST00000589933	SLC6A8	P48029	635 aa		18.88	■□□□□ 0.61
TMC6-213	ENST00000589933	LASP1	Q14847	261 aa	Known RBP	18.88	■□□□□ 0.61
TMC6-213	ENST00000589933	SPDYE7P	Q495Y7	208 aa		18.88	■□□□□ 0.61
TMC6-213	ENST00000589933	TMEM201	Q5SNT2	666 aa		18.88	■□□□□ 0.61
TMC6-213	ENST00000589933	YTHDF3	Q7Z739	585 aa	Known RBP	18.88	■□□□□ 0.61
TMC6-213	ENST00000589933	LILRA2	Q8N149	483 aa		18.88	■□□□□ 0.61
TMC6-213	ENST00000589933	OR56A1	Q8NGH5	318 aa		18.88	■□□□□ 0.61
TMC6-213	ENST00000589933	PHOSPHO1	Q8TCT1	267 aa		18.88	■□□□□ 0.61
TMC6-213	ENST00000589933	ADAMTS15	Q8TE58	950 aa		18.88	■□□□□ 0.61
TMC6-213	ENST00000589933	OSTF1	Q92882	214 aa		18.88	■□□□□ 0.61
TMC6-213	ENST00000589933	ARL8A	Q96BM9	186 aa		18.88	■□□□□ 0.61
TMC6-213	ENST00000589933	FAM120B	Q96EK7	910 aa	Known RBP	18.88	■□□□□ 0.61
TMC6-213	ENST00000589933	C16orf58	Q96GQ5	468 aa		18.88	■□□□□ 0.61
TMC6-213	ENST00000589933	KLHL15	Q96M94	604 aa		18.88	■□□□□ 0.61
TMC6-213	ENST00000589933	PIGU	Q9H490	435 aa		18.88	■□□□□ 0.61
TMC6-213	ENST00000589933	TUBB1	Q9H4B7	451 aa		18.88	■□□□□ 0.61
TMC6-213	ENST00000589933	MKS1	Q9NXB0	559 aa		18.88	■□□□□ 0.61
TMC6-213	ENST00000589933	ATP6V1H	Q9UI12	483 aa		18.88	■□□□□ 0.61
TMC6-213	ENST00000589933	GPR52	Q9Y2T5	361 aa		18.88	■□□□□ 0.61
TMC6-213	ENST00000589933	RAI1	Q7Z5J4	1906 aa	Predicted RBP	18.88	■□□□□ 0.61
TMC6-213	ENST00000589933	GTPBP1	O00178	669 aa	Known RBP	18.87	■□□□□ 0.61

Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms