RNA–Protein interactions for RNA: ENST00000589823.6

VMP1-210, Transcript of vacuole membrane protein 1, humanhuman

TSL 3

Gene VMP1, Length 580 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-210ENST00000589823 CCDC80Q76M96 950 aa12.45□□□□□ -0.42
VMP1-210ENST00000589823 EIF3MQ7L2H7 374 aaKnown RBP12.45□□□□□ -0.42
VMP1-210ENST00000589823 VRK2Q86Y07 508 aa12.45□□□□□ -0.42
VMP1-210ENST00000589823 PTRH1Q86Y79 214 aaKnown RBP12.45□□□□□ -0.42
VMP1-210ENST00000589823 ARMC8Q8IUR7 673 aa12.45□□□□□ -0.42
VMP1-210ENST00000589823 CMIPQ8IY22 773 aa12.45□□□□□ -0.42
VMP1-210ENST00000589823 OR1J4Q8NGS1 313 aa12.45□□□□□ -0.42
VMP1-210ENST00000589823 SLC26A7Q8TE54 656 aa12.45□□□□□ -0.42
VMP1-210ENST00000589823 DUSP19Q8WTR2 217 aa12.45□□□□□ -0.42
VMP1-210ENST00000589823 MCUR1Q96AQ8 359 aa12.45□□□□□ -0.42
VMP1-210ENST00000589823 DTNBP1Q96EV8 351 aa12.45□□□□□ -0.42
VMP1-210ENST00000589823 ZFP64Q9NPA5 681 aa12.45□□□□□ -0.42
VMP1-210ENST00000589823 SEC14L3Q9UDX4 400 aa12.45□□□□□ -0.42
VMP1-210ENST00000589823 EGFL7Q9UHF1 273 aa12.45□□□□□ -0.42
VMP1-210ENST00000589823 KCNE5Q9UJ90 142 aa12.45□□□□□ -0.42
VMP1-210ENST00000589823 ZNF443Q9Y2A4 671 aaPredicted RBP12.45□□□□□ -0.42
VMP1-210ENST00000589823 ITPR1Q14643 2758 aa12.44□□□□□ -0.42
VMP1-210ENST00000589823 M0QX08 132 aa12.44□□□□□ -0.42
VMP1-210ENST00000589823 ACOT7O00154 380 aa12.44□□□□□ -0.42
VMP1-210ENST00000589823 GNB5O14775 395 aa12.44□□□□□ -0.42
VMP1-210ENST00000589823 PDE5AO76074 875 aa12.44□□□□□ -0.42
VMP1-210ENST00000589823 UBL4AP11441 157 aa12.44□□□□□ -0.42
VMP1-210ENST00000589823 ME2P23368 584 aa12.44□□□□□ -0.42
VMP1-210ENST00000589823 KDELR2P33947 212 aa12.44□□□□□ -0.42
VMP1-210ENST00000589823 ADH7P40394 386 aa12.44□□□□□ -0.42
VMP1-210ENST00000589823 NCALDP61601 193 aa12.44□□□□□ -0.42
VMP1-210ENST00000589823 KCNJ10P78508 379 aa12.44□□□□□ -0.42
VMP1-210ENST00000589823 BNIP2Q12982 314 aa12.44□□□□□ -0.42
VMP1-210ENST00000589823 CD226Q15762 336 aa12.44□□□□□ -0.42
VMP1-210ENST00000589823 ZSWIM7Q19AV6 140 aa12.44□□□□□ -0.42
VMP1-210ENST00000589823 LRRC23Q53EV4 343 aaPredicted RBP12.44□□□□□ -0.42
VMP1-210ENST00000589823 EIPR1Q53HC9 387 aa12.44□□□□□ -0.42
VMP1-210ENST00000589823 TIGD3Q6B0B8 471 aa12.44□□□□□ -0.42
VMP1-210ENST00000589823 GLYATQ6IB77 296 aa12.44□□□□□ -0.42
VMP1-210ENST00000589823 PLCZ1Q86YW0 608 aa12.44□□□□□ -0.42
VMP1-210ENST00000589823 FAM156AQ8NDB6 213 aa12.44□□□□□ -0.42
VMP1-210ENST00000589823 BHLHE22Q8NFJ8 381 aaPredicted RBP12.44□□□□□ -0.42
VMP1-210ENST00000589823 OR4K17Q8NGC6 315 aa12.44□□□□□ -0.42
VMP1-210ENST00000589823 RASSF5Q8WWW0 418 aa12.44□□□□□ -0.42
VMP1-210ENST00000589823 FAM162AQ96A26 154 aa12.44□□□□□ -0.42
VMP1-210ENST00000589823 NTNG2Q96CW9 530 aa12.44□□□□□ -0.42
VMP1-210ENST00000589823 FRMD6Q96NE9 622 aa12.44□□□□□ -0.42
VMP1-210ENST00000589823 RTN4RQ9BZR6 473 aa12.44□□□□□ -0.42
VMP1-210ENST00000589823 LRMDAQ9H2I8 198 aa12.44□□□□□ -0.42
VMP1-210ENST00000589823 TUBA8Q9NY65 449 aaPredicted RBP12.44□□□□□ -0.42
VMP1-210ENST00000589823 LUZP4Q9P127 313 aa12.44□□□□□ -0.42
VMP1-210ENST00000589823 B4GALT7Q9UBV7 327 aa12.44□□□□□ -0.42
VMP1-210ENST00000589823 MAGEL2Q9UJ55 1249 aa12.44□□□□□ -0.42
VMP1-210ENST00000589823 SLC13A4Q9UKG4 626 aa12.44□□□□□ -0.42
VMP1-210ENST00000589823 CACNA1BQ00975 2339 aa12.44□□□□□ -0.42
VMP1-210ENST00000589823 EPG5Q9HCE0 2579 aa12.43□□□□□ -0.42
VMP1-210ENST00000589823 CNTRLQ7Z7A1 2325 aa12.43□□□□□ -0.42
VMP1-210ENST00000589823 PINLYPA6NC86 204 aa12.43□□□□□ -0.42
VMP1-210ENST00000589823 GSC2O15499 205 aa12.43□□□□□ -0.42
VMP1-210ENST00000589823 ZNF264O43296 627 aa12.43□□□□□ -0.42
VMP1-210ENST00000589823 HCRTR2O43614 444 aa12.43□□□□□ -0.42
VMP1-210ENST00000589823 EIF4E2O60573 245 aaKnown RBP12.43□□□□□ -0.42
VMP1-210ENST00000589823 GCM2O75603 506 aaPredicted RBP12.43□□□□□ -0.42
VMP1-210ENST00000589823 CYP7B1O75881 506 aa12.43□□□□□ -0.42
VMP1-210ENST00000589823 MFN2O95140 757 aa12.43□□□□□ -0.42
VMP1-210ENST00000589823 STAMBPO95630 424 aa12.43□□□□□ -0.42
VMP1-210ENST00000589823 OPN1SWP03999 348 aa12.43□□□□□ -0.42
VMP1-210ENST00000589823 NCK1P16333 377 aa12.43□□□□□ -0.42
VMP1-210ENST00000589823 GGT1P19440 569 aa12.43□□□□□ -0.42
VMP1-210ENST00000589823 MSX1P28360 303 aa12.43□□□□□ -0.42
VMP1-210ENST00000589823 PRKAR1BP31321 381 aa12.43□□□□□ -0.42
VMP1-210ENST00000589823 FOXO1Q12778 655 aa12.43□□□□□ -0.42
VMP1-210ENST00000589823 NFATC3Q12968 1075 aa12.43□□□□□ -0.42
VMP1-210ENST00000589823 MRPL2Q5T653 305 aaKnown RBP12.43□□□□□ -0.42
VMP1-210ENST00000589823 RNF220Q5VTB9 566 aa12.43□□□□□ -0.42
VMP1-210ENST00000589823 FNDC7Q5VTL7 733 aa12.43□□□□□ -0.42
VMP1-210ENST00000589823 OR5M10Q6IEU7 315 aa12.43□□□□□ -0.42
VMP1-210ENST00000589823 DHRS4L2Q6PKH6 230 aa12.43□□□□□ -0.42
VMP1-210ENST00000589823 YTHDF3Q7Z739 585 aaKnown RBP12.43□□□□□ -0.42
VMP1-210ENST00000589823 SLC22A16Q86VW1 577 aa12.43□□□□□ -0.42
VMP1-210ENST00000589823 TMCO5AQ8N6Q1 288 aa12.43□□□□□ -0.42
VMP1-210ENST00000589823 ZFP62Q8NB50 900 aaPredicted RBP12.43□□□□□ -0.42
VMP1-210ENST00000589823 B4GALNT2Q8NHY0 566 aa12.43□□□□□ -0.42
VMP1-210ENST00000589823 SH3YL1Q96HL8 342 aaPredicted RBP12.43□□□□□ -0.42
VMP1-210ENST00000589823 CLPTM1LQ96KA5 538 aa12.43□□□□□ -0.42
VMP1-210ENST00000589823 PINK1Q9BXM7 581 aa12.43□□□□□ -0.42
VMP1-210ENST00000589823 CADM1Q9BY67 442 aaKnown RBP12.43□□□□□ -0.42
VMP1-210ENST00000589823 MUC13Q9H3R2 512 aa12.43□□□□□ -0.42
VMP1-210ENST00000589823 PTGES2Q9H7Z7 377 aa12.43□□□□□ -0.42
VMP1-210ENST00000589823 KLHL28Q9NXS3 571 aa12.43□□□□□ -0.42
VMP1-210ENST00000589823 CARD8Q9Y2G2 431 aa12.43□□□□□ -0.42
VMP1-210ENST00000589823 SNX13Q9Y5W8 968 aa12.43□□□□□ -0.42
VMP1-210ENST00000589823 ATMQ13315 3056 aa12.43□□□□□ -0.42
VMP1-210ENST00000589823 LRRC3CA6NJW4 275 aa12.42□□□□□ -0.42
VMP1-210ENST00000589823 CLDN24A6NM45 220 aa12.42□□□□□ -0.42
VMP1-210ENST00000589823 FAM166BA8MTA8 275 aa12.42□□□□□ -0.42
VMP1-210ENST00000589823 ADAM10O14672 748 aa12.42□□□□□ -0.42
VMP1-210ENST00000589823 GMFGO60234 142 aa12.42□□□□□ -0.42
VMP1-210ENST00000589823 CBR3O75828 277 aa12.42□□□□□ -0.42
VMP1-210ENST00000589823 CRYABP02511 175 aaKnown RBP12.42□□□□□ -0.42
VMP1-210ENST00000589823 UBTFL6P0CB48 400 aaPredicted RBP12.42□□□□□ -0.42
VMP1-210ENST00000589823 GDF1P27539 372 aa12.42□□□□□ -0.42
VMP1-210ENST00000589823 MSX2P35548 267 aaPredicted RBP12.42□□□□□ -0.42
VMP1-210ENST00000589823 RFC3P40938 356 aa12.42□□□□□ -0.42
VMP1-210ENST00000589823 P2RX1P51575 399 aa12.42□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms