RNA–Protein interactions for RNA: ENST00000589318.5

DDX39A-209, Transcript of DExD-box helicase 39A, human

TSL 1 (best)

Gene DDX39A, Length 1,903 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
DDX39A-209	ENST00000589318	OR2W5	A6NFC9	320 aa		14.31	□□□□□ -0.12
DDX39A-209	ENST00000589318	SNTN	A6NMZ2	147 aa		14.31	□□□□□ -0.12
DDX39A-209	ENST00000589318	BET1	O15155	118 aa		14.31	□□□□□ -0.12
DDX39A-209	ENST00000589318	ZNF749	O43361	778 aa		14.31	□□□□□ -0.12
DDX39A-209	ENST00000589318	XPNPEP2	O43895	674 aa		14.31	□□□□□ -0.12
DDX39A-209	ENST00000589318	ACP2	P11117	423 aa		14.31	□□□□□ -0.12
DDX39A-209	ENST00000589318	S1PR1	P21453	382 aa		14.31	□□□□□ -0.12
DDX39A-209	ENST00000589318	FPR1	P21462	350 aa		14.31	□□□□□ -0.12
DDX39A-209	ENST00000589318	PPP2R1B	P30154	601 aa		14.31	□□□□□ -0.12
DDX39A-209	ENST00000589318	AVPR2	P30518	371 aa		14.31	□□□□□ -0.12
DDX39A-209	ENST00000589318	DNAJA1	P31689	397 aa	Known RBP	14.31	□□□□□ -0.12
DDX39A-209	ENST00000589318	BTG2	P78543	158 aa		14.31	□□□□□ -0.12
DDX39A-209	ENST00000589318	DUSP8	Q13202	625 aa		14.31	□□□□□ -0.12
DDX39A-209	ENST00000589318	DGCR6	Q14129	220 aa		14.31	□□□□□ -0.12
DDX39A-209	ENST00000589318	FAM214A	Q32MH5	1076 aa		14.31	□□□□□ -0.12
DDX39A-209	ENST00000589318	PRAMEF8	Q5VWM4	474 aa		14.31	□□□□□ -0.12
DDX39A-209	ENST00000589318	PRAMEF7	Q5VXH5	474 aa		14.31	□□□□□ -0.12
DDX39A-209	ENST00000589318	TTLL10	Q6ZVT0	673 aa		14.31	□□□□□ -0.12
DDX39A-209	ENST00000589318	HDDC2	Q7Z4H3	204 aa		14.31	□□□□□ -0.12
DDX39A-209	ENST00000589318	BMP8A	Q7Z5Y6	402 aa		14.31	□□□□□ -0.12
DDX39A-209	ENST00000589318	CCDC190	Q86UF4	302 aa		14.31	□□□□□ -0.12
DDX39A-209	ENST00000589318	SIGLEC11	Q96RL6	698 aa		14.31	□□□□□ -0.12
DDX39A-209	ENST00000589318	ZNF607	Q96SK3	696 aa		14.31	□□□□□ -0.12
DDX39A-209	ENST00000589318	WFDC6	Q9BQY6	131 aa		14.31	□□□□□ -0.12
DDX39A-209	ENST00000589318	CDADC1	Q9BWV3	514 aa		14.31	□□□□□ -0.12
DDX39A-209	ENST00000589318	SMOC1	Q9H4F8	434 aa		14.31	□□□□□ -0.12
DDX39A-209	ENST00000589318	TOR4A	Q9NXH8	423 aa		14.31	□□□□□ -0.12
DDX39A-209	ENST00000589318	SAMHD1	Q9Y3Z3	626 aa	Known RBP	14.31	□□□□□ -0.12
DDX39A-209	ENST00000589318		A0A075B6Q4	140 aa		14.31	□□□□□ -0.12
DDX39A-209	ENST00000589318		A0A1W2PQ72	361 aa		14.31	□□□□□ -0.12
DDX39A-209	ENST00000589318		J3KTA2	159 aa		14.31	□□□□□ -0.12
DDX39A-209	ENST00000589318	SEMA7A	O75326	666 aa		14.31	□□□□□ -0.12
DDX39A-209	ENST00000589318	EPPIN	O95925	133 aa		14.31	□□□□□ -0.12
DDX39A-209	ENST00000589318	CBX7	O95931	251 aa		14.31	□□□□□ -0.12
DDX39A-209	ENST00000589318	MAP3K8	P41279	467 aa		14.31	□□□□□ -0.12
DDX39A-209	ENST00000589318	HTR2B	P41595	481 aa		14.31	□□□□□ -0.12
DDX39A-209	ENST00000589318	XCR1	P46094	333 aa		14.31	□□□□□ -0.12
DDX39A-209	ENST00000589318	MAP4K2	Q12851	820 aa		14.31	□□□□□ -0.12
DDX39A-209	ENST00000589318	RAPSN	Q13702	412 aa		14.31	□□□□□ -0.12
DDX39A-209	ENST00000589318	EXOSC7	Q15024	291 aa	Known RBP	14.31	□□□□□ -0.12
DDX39A-209	ENST00000589318	TBCE	Q15813	527 aa	Predicted RBP	14.31	□□□□□ -0.12
DDX39A-209	ENST00000589318	DUSP5	Q16690	384 aa		14.31	□□□□□ -0.12
DDX39A-209	ENST00000589318	PROX2	Q3B8N5	592 aa		14.31	□□□□□ -0.12
DDX39A-209	ENST00000589318	ZNF605	Q86T29	641 aa		14.31	□□□□□ -0.12
DDX39A-209	ENST00000589318	TSPYL5	Q86VY4	417 aa	Predicted RBP	14.31	□□□□□ -0.12
DDX39A-209	ENST00000589318	TCTE3	Q8IZS6	198 aa		14.31	□□□□□ -0.12
DDX39A-209	ENST00000589318	OR4D11	Q8NGI4	311 aa		14.31	□□□□□ -0.12
DDX39A-209	ENST00000589318	CNIH3	Q8TBE1	160 aa		14.31	□□□□□ -0.12
DDX39A-209	ENST00000589318	ZDHHC19	Q8WVZ1	309 aa	Predicted RBP	14.31	□□□□□ -0.12
DDX39A-209	ENST00000589318	MVB12A	Q96EY5	273 aa		14.31	□□□□□ -0.12
DDX39A-209	ENST00000589318	TRNT1	Q96Q11	434 aa	Known RBP	14.31	□□□□□ -0.12
DDX39A-209	ENST00000589318	EPYC	Q99645	322 aa		14.31	□□□□□ -0.12
DDX39A-209	ENST00000589318	NIPAL2	Q9H841	368 aa		14.31	□□□□□ -0.12
DDX39A-209	ENST00000589318	REEP1	Q9H902	201 aa		14.31	□□□□□ -0.12
DDX39A-209	ENST00000589318	ADAP2	Q9NPF8	381 aa		14.31	□□□□□ -0.12
DDX39A-209	ENST00000589318	PRTFDC1	Q9NRG1	225 aa		14.31	□□□□□ -0.12
DDX39A-209	ENST00000589318	FGF21	Q9NSA1	209 aa		14.31	□□□□□ -0.12
DDX39A-209	ENST00000589318	DHCR7	Q9UBM7	475 aa	Known RBP	14.31	□□□□□ -0.12
DDX39A-209	ENST00000589318	LIPT1	Q9Y234	373 aa		14.31	□□□□□ -0.12
DDX39A-209	ENST00000589318	MRPS33	Q9Y291	106 aa	Known RBP	14.31	□□□□□ -0.12
DDX39A-209	ENST00000589318	ASCC3	Q8N3C0	2202 aa	Known RBP	14.3	□□□□□ -0.12
DDX39A-209	ENST00000589318		A0A0G2JPF8	293 aa		14.3	□□□□□ -0.12
DDX39A-209	ENST00000589318	HNRNPCL2	B2RXH8	293 aa		14.3	□□□□□ -0.12
DDX39A-209	ENST00000589318	HNRNPCL3	B7ZW38	293 aa		14.3	□□□□□ -0.12
DDX39A-209	ENST00000589318	NOS1AP	O75052	506 aa	Predicted RBP	14.3	□□□□□ -0.12
DDX39A-209	ENST00000589318	FAM20B	O75063	409 aa		14.3	□□□□□ -0.12
DDX39A-209	ENST00000589318	TSPAN9	O75954	239 aa		14.3	□□□□□ -0.12
DDX39A-209	ENST00000589318	FADS2	O95864	444 aa	Known RBP	14.3	□□□□□ -0.12
DDX39A-209	ENST00000589318	ANKRD34C	P0C6C1	535 aa		14.3	□□□□□ -0.12
DDX39A-209	ENST00000589318	HNRNPCL4	P0DMR1	293 aa		14.3	□□□□□ -0.12
DDX39A-209	ENST00000589318	NAGA	P17050	411 aa		14.3	□□□□□ -0.12
DDX39A-209	ENST00000589318	IGFBP5	P24593	272 aa		14.3	□□□□□ -0.12
DDX39A-209	ENST00000589318	ARHGDIA	P52565	204 aa		14.3	□□□□□ -0.12
DDX39A-209	ENST00000589318	KHDRBS1	Q07666	443 aa	Known RBP eCLIP	14.3	□□□□□ -0.12
DDX39A-209	ENST00000589318	GNA13	Q14344	377 aa		14.3	□□□□□ -0.12
DDX39A-209	ENST00000589318	GPAT3	Q53EU6	434 aa		14.3	□□□□□ -0.12
DDX39A-209	ENST00000589318	CREB3L2	Q70SY1	520 aa		14.3	□□□□□ -0.12
DDX39A-209	ENST00000589318	MED25	Q71SY5	747 aa		14.3	□□□□□ -0.12
DDX39A-209	ENST00000589318	CADM2	Q8N3J6	435 aa		14.3	□□□□□ -0.12
DDX39A-209	ENST00000589318	OR4C15	Q8NGM1	316 aa		14.3	□□□□□ -0.12
DDX39A-209	ENST00000589318	OR5H6	Q8NGV6	325 aa		14.3	□□□□□ -0.12
DDX39A-209	ENST00000589318	ADAMTS15	Q8TE58	950 aa		14.3	□□□□□ -0.12
DDX39A-209	ENST00000589318	SLC7A6	Q92536	515 aa		14.3	□□□□□ -0.12
DDX39A-209	ENST00000589318	HOXB13	Q92826	284 aa	Predicted RBP	14.3	□□□□□ -0.12
DDX39A-209	ENST00000589318	RPL3L	Q92901	407 aa	Known RBP	14.3	□□□□□ -0.12
DDX39A-209	ENST00000589318	CDS1	Q92903	461 aa		14.3	□□□□□ -0.12
DDX39A-209	ENST00000589318	NAT6	Q93015	286 aa		14.3	□□□□□ -0.12
DDX39A-209	ENST00000589318	ZNF354B	Q96LW1	612 aa		14.3	□□□□□ -0.12
DDX39A-209	ENST00000589318	LANCL2	Q9NS86	450 aa		14.3	□□□□□ -0.12
DDX39A-209	ENST00000589318	SEC14L3	Q9UDX4	400 aa		14.3	□□□□□ -0.12
DDX39A-209	ENST00000589318	KLHL21	Q9UJP4	597 aa		14.3	□□□□□ -0.12
DDX39A-209	ENST00000589318	GMEB2	Q9UKD1	530 aa		14.3	□□□□□ -0.12
DDX39A-209	ENST00000589318	CFL2	Q9Y281	166 aa		14.3	□□□□□ -0.12
DDX39A-209	ENST00000589318	ENPP4	Q9Y6X5	453 aa		14.3	□□□□□ -0.12
DDX39A-209	ENST00000589318	DUXA	A6NLW8	204 aa		14.29	□□□□□ -0.12
DDX39A-209	ENST00000589318	CKMT1A	P12532	417 aa		14.29	□□□□□ -0.12
DDX39A-209	ENST00000589318	MAOA	P21397	527 aa		14.29	□□□□□ -0.12
DDX39A-209	ENST00000589318	OR1D4	P47884	311 aa		14.29	□□□□□ -0.12
DDX39A-209	ENST00000589318	DAP	P51397	102 aa		14.29	□□□□□ -0.12
DDX39A-209	ENST00000589318	PDX1	P52945	283 aa		14.29	□□□□□ -0.12

Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms