RNA–Protein interactions for RNA: ENST00000588885.1

RFX1-204, Transcript of regulatory factor X1, humanhuman

TSL 3

Gene RFX1, Length 886 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX1-204ENST00000588885 PAGE3Q5JUK9 113 aa10.48□□□□□ -0.73
RFX1-204ENST00000588885 OR4F3Q6IEY1 312 aa10.48□□□□□ -0.73
RFX1-204ENST00000588885 CAMKMTQ7Z624 323 aa10.48□□□□□ -0.73
RFX1-204ENST00000588885 YTHDF3Q7Z739 585 aaKnown RBP10.48□□□□□ -0.73
RFX1-204ENST00000588885 IFNEQ86WN2 208 aa10.48□□□□□ -0.73
RFX1-204ENST00000588885 DMRTC2Q8IXT2 367 aaPredicted RBP10.48□□□□□ -0.73
RFX1-204ENST00000588885 ZFP28Q8NHY6 868 aa10.48□□□□□ -0.73
RFX1-204ENST00000588885 SLC7A6OSQ96CW6 309 aaPredicted RBP10.48□□□□□ -0.73
RFX1-204ENST00000588885 SFXN2Q96NB2 322 aa10.48□□□□□ -0.73
RFX1-204ENST00000588885 TUBA1CQ9BQE3 449 aa10.48□□□□□ -0.73
RFX1-204ENST00000588885 LMF2Q9BU23 707 aaKnown RBP10.48□□□□□ -0.73
RFX1-204ENST00000588885 OR2B2Q9GZK3 357 aa10.48□□□□□ -0.73
RFX1-204ENST00000588885 LEF1Q9UJU2 399 aaPredicted RBP10.48□□□□□ -0.73
RFX1-204ENST00000588885 PCDHGB3Q9Y5G1 929 aa10.48□□□□□ -0.73
RFX1-204ENST00000588885 SNX8Q9Y5X2 465 aa10.48□□□□□ -0.73
RFX1-204ENST00000588885 TEP1Q99973 2627 aaKnown RBP10.48□□□□□ -0.73
RFX1-204ENST00000588885 A0A1W2PP18 115 aa10.47□□□□□ -0.73
RFX1-204ENST00000588885 ACTL6AO96019 429 aa10.47□□□□□ -0.73
RFX1-204ENST00000588885 PGRP06401 933 aa10.47□□□□□ -0.73
RFX1-204ENST00000588885 ACP2P11117 423 aa10.47□□□□□ -0.73
RFX1-204ENST00000588885 IGFBP2P18065 325 aa10.47□□□□□ -0.73
RFX1-204ENST00000588885 SRD5A2P31213 254 aa10.47□□□□□ -0.73
RFX1-204ENST00000588885 CEACAM8P31997 349 aaPredicted RBP10.47□□□□□ -0.73
RFX1-204ENST00000588885 S100A3P33764 101 aa10.47□□□□□ -0.73
RFX1-204ENST00000588885 RPL3P39023 403 aaKnown RBP10.47□□□□□ -0.73
RFX1-204ENST00000588885 PSPHP78330 225 aa10.47□□□□□ -0.73
RFX1-204ENST00000588885 MXRA7P84157 204 aa10.47□□□□□ -0.73
RFX1-204ENST00000588885 SLC25A3Q00325 362 aa10.47□□□□□ -0.73
RFX1-204ENST00000588885 MYBPHQ13203 477 aa10.47□□□□□ -0.73
RFX1-204ENST00000588885 DPY19L1Q2PZI1 675 aa10.47□□□□□ -0.73
RFX1-204ENST00000588885 SLC25A35Q3KQZ1 300 aa10.47□□□□□ -0.73
RFX1-204ENST00000588885 GRAMD1BQ3KR37 738 aa10.47□□□□□ -0.73
RFX1-204ENST00000588885 GTDC1Q4AE62 458 aa10.47□□□□□ -0.73
RFX1-204ENST00000588885 CPTPQ5TA50 214 aa10.47□□□□□ -0.73
RFX1-204ENST00000588885 NSUN5P2Q63ZY6 315 aa10.47□□□□□ -0.73
RFX1-204ENST00000588885 FIGNL1Q6PIW4 674 aa10.47□□□□□ -0.73
RFX1-204ENST00000588885 ENPP6Q6UWR7 440 aa10.47□□□□□ -0.73
RFX1-204ENST00000588885 APOOLQ6UXV4 268 aa10.47□□□□□ -0.73
RFX1-204ENST00000588885 R3HCC1LQ7Z5L2 792 aaKnown RBP10.47□□□□□ -0.73
RFX1-204ENST00000588885 DHDDSQ86SQ9 333 aa10.47□□□□□ -0.73
RFX1-204ENST00000588885 ANKRD46Q86W74 232 aa10.47□□□□□ -0.73
RFX1-204ENST00000588885 LACC1Q8IV20 430 aa10.47□□□□□ -0.73
RFX1-204ENST00000588885 C9orf106Q8NAJ2 232 aa10.47□□□□□ -0.73
RFX1-204ENST00000588885 ACBD4Q8NC06 268 aa10.47□□□□□ -0.73
RFX1-204ENST00000588885 SLC16A11Q8NCK7 471 aa10.47□□□□□ -0.73
RFX1-204ENST00000588885 RBM15BQ8NDT2 890 aaKnown RBP10.47□□□□□ -0.73
RFX1-204ENST00000588885 OR2M3Q8NG83 312 aa10.47□□□□□ -0.73
RFX1-204ENST00000588885 JADE3Q92613 823 aa10.47□□□□□ -0.73
RFX1-204ENST00000588885 DUSP26Q9BV47 211 aa10.47□□□□□ -0.73
RFX1-204ENST00000588885 C3orf14Q9HBI5 128 aa10.47□□□□□ -0.73
RFX1-204ENST00000588885 FBXO34Q9NWN3 711 aa10.47□□□□□ -0.73
RFX1-204ENST00000588885 MRTO4Q9UKD2 239 aaKnown RBP10.47□□□□□ -0.73
RFX1-204ENST00000588885 NDUFAF1Q9Y375 327 aa10.47□□□□□ -0.73
RFX1-204ENST00000588885 SPG11Q96JI7 2443 aa10.47□□□□□ -0.73
RFX1-204ENST00000588885 F8P00451 2351 aa10.46□□□□□ -0.73
RFX1-204ENST00000588885 GIMAP1-GIMAP5A0A087WTJ2 511 aa10.46□□□□□ -0.73
RFX1-204ENST00000588885 A0A1W2PRB8 838 aa10.46□□□□□ -0.73
RFX1-204ENST00000588885 B2RBV5 119 aa10.46□□□□□ -0.73
RFX1-204ENST00000588885 SHISA8B8ZZ34 492 aa10.46□□□□□ -0.73
RFX1-204ENST00000588885 ANKRD65E5RJM6 399 aa10.46□□□□□ -0.73
RFX1-204ENST00000588885 FXYD1O00168 92 aa10.46□□□□□ -0.73
RFX1-204ENST00000588885 DVL2O14641 736 aa10.46□□□□□ -0.73
RFX1-204ENST00000588885 EMC8O43402 210 aa10.46□□□□□ -0.73
RFX1-204ENST00000588885 TBX19O60806 448 aa10.46□□□□□ -0.73
RFX1-204ENST00000588885 KCNH1O95259 989 aa10.46□□□□□ -0.73
RFX1-204ENST00000588885 IL6P05231 212 aa10.46□□□□□ -0.73
RFX1-204ENST00000588885 CPN1P15169 458 aa10.46□□□□□ -0.73
RFX1-204ENST00000588885 HK1P19367 917 aa10.46□□□□□ -0.73
RFX1-204ENST00000588885 TIMP3P35625 211 aa10.46□□□□□ -0.73
RFX1-204ENST00000588885 CPOXP36551 454 aa10.46□□□□□ -0.73
RFX1-204ENST00000588885 CLK3P49761 638 aaKnown RBP10.46□□□□□ -0.73
RFX1-204ENST00000588885 LHX2P50458 406 aa10.46□□□□□ -0.73
RFX1-204ENST00000588885 RNF144AP50876 292 aaPredicted RBP10.46□□□□□ -0.73
RFX1-204ENST00000588885 ZNF136P52737 540 aa10.46□□□□□ -0.73
RFX1-204ENST00000588885 GFRA1P56159 465 aa10.46□□□□□ -0.73
RFX1-204ENST00000588885 FOXF2Q12947 444 aa10.46□□□□□ -0.73
RFX1-204ENST00000588885 NFYCQ13952 458 aa10.46□□□□□ -0.73
RFX1-204ENST00000588885 LAPTM4AQ15012 233 aa10.46□□□□□ -0.73
RFX1-204ENST00000588885 SF3B4Q15427 424 aaKnown RBP eCLIP10.46□□□□□ -0.732e-7■■■■■ 32.9
RFX1-204ENST00000588885 DUSP5Q16690 384 aa10.46□□□□□ -0.73
RFX1-204ENST00000588885 MMEL1Q495T6 779 aa10.46□□□□□ -0.73
RFX1-204ENST00000588885 SPDYE7PQ495Y7 208 aa10.46□□□□□ -0.73
RFX1-204ENST00000588885 COQ5Q5HYK3 327 aa10.46□□□□□ -0.73
RFX1-204ENST00000588885 RAET1LQ5VY80 246 aa10.46□□□□□ -0.73
RFX1-204ENST00000588885 AAGABQ6PD74 315 aa10.46□□□□□ -0.73
RFX1-204ENST00000588885 ARSKQ6UWY0 536 aa10.46□□□□□ -0.73
RFX1-204ENST00000588885 MSANTD1Q6ZTZ1 278 aa10.46□□□□□ -0.73
RFX1-204ENST00000588885 ZAR1Q86SH2 424 aa10.46□□□□□ -0.73
RFX1-204ENST00000588885 CDH24Q86UP0 819 aa10.46□□□□□ -0.73
RFX1-204ENST00000588885 TMEM200AQ86VY9 491 aa10.46□□□□□ -0.73
RFX1-204ENST00000588885 UBQLNLQ8IYU4 475 aa10.46□□□□□ -0.73
RFX1-204ENST00000588885 CLECL1Q8IZS7 167 aa10.46□□□□□ -0.73
RFX1-204ENST00000588885 GATSQ8NAP1 163 aa10.46□□□□□ -0.73
RFX1-204ENST00000588885 RELL2Q8NC24 303 aaPredicted RBP10.46□□□□□ -0.73
RFX1-204ENST00000588885 OR8J2Q8NGG1 315 aa10.46□□□□□ -0.73
RFX1-204ENST00000588885 TSPEARQ8WU66 669 aa10.46□□□□□ -0.73
RFX1-204ENST00000588885 RNF138Q8WVD3 245 aa10.46□□□□□ -0.73
RFX1-204ENST00000588885 MTERF3Q96E29 417 aa10.46□□□□□ -0.73
RFX1-204ENST00000588885 FAM120BQ96EK7 910 aaKnown RBP10.46□□□□□ -0.73
RFX1-204ENST00000588885 GIMAP5Q96F15 307 aa10.46□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms