RNA–Protein interactions for RNA: ENST00000587888.5

ERCC1-205, Transcript of ERCC excision repair 1, endonuclease non-catalytic subunit, humanhuman

TSL 5

Gene ERCC1, Length 556 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC1-205ENST00000587888 GTF2IRD2BQ6EKJ0 949 aa12.65□□□□□ -0.38
ERCC1-205ENST00000587888 GTF2IRD2Q86UP8 949 aa12.65□□□□□ -0.38
ERCC1-205ENST00000587888 LILRA2Q8N149 483 aa12.65□□□□□ -0.38
ERCC1-205ENST00000587888 B4GALNT2Q8NHY0 566 aa12.65□□□□□ -0.38
ERCC1-205ENST00000587888 POC1BQ8TC44 478 aa12.65□□□□□ -0.38
ERCC1-205ENST00000587888 FAM110BQ8TC76 370 aa12.65□□□□□ -0.38
ERCC1-205ENST00000587888 AKAP1Q92667 903 aaKnown RBP eCLIP12.65□□□□□ -0.38
ERCC1-205ENST00000587888 HOXB13Q92826 284 aaPredicted RBP12.65□□□□□ -0.38
ERCC1-205ENST00000587888 ZBTB8AQ96BR9 441 aa12.65□□□□□ -0.38
ERCC1-205ENST00000587888 ZBED6CLQ96FA7 236 aaPredicted RBP12.65□□□□□ -0.38
ERCC1-205ENST00000587888 CHMP6Q96FZ7 201 aa12.65□□□□□ -0.38
ERCC1-205ENST00000587888 ADGRG7Q96K78 797 aa12.65□□□□□ -0.38
ERCC1-205ENST00000587888 CXorf56Q9H5V9 222 aa12.65□□□□□ -0.38
ERCC1-205ENST00000587888 REEP4Q9H6H4 257 aa12.65□□□□□ -0.38
ERCC1-205ENST00000587888 GLRX2Q9NS18 164 aa12.65□□□□□ -0.38
ERCC1-205ENST00000587888 RAI1Q7Z5J4 1906 aaPredicted RBP12.64□□□□□ -0.39
ERCC1-205ENST00000587888 GIMAP1-GIMAP5A0A087WTJ2 511 aa12.64□□□□□ -0.39
ERCC1-205ENST00000587888 SCDO00767 359 aa12.64□□□□□ -0.39
ERCC1-205ENST00000587888 HS3ST1O14792 307 aa12.64□□□□□ -0.39
ERCC1-205ENST00000587888 PLIN3O60664 434 aa12.64□□□□□ -0.39
ERCC1-205ENST00000587888 TUBBP07437 444 aa12.64□□□□□ -0.39
ERCC1-205ENST00000587888 IFI6P09912 130 aa12.64□□□□□ -0.39
ERCC1-205ENST00000587888 ALOX5P09917 674 aa12.64□□□□□ -0.39
ERCC1-205ENST00000587888 NID1P14543 1247 aa12.64□□□□□ -0.39
ERCC1-205ENST00000587888 SDC1P18827 310 aa12.64□□□□□ -0.39
ERCC1-205ENST00000587888 ME2P23368 584 aa12.64□□□□□ -0.39
ERCC1-205ENST00000587888 PSMA4P25789 261 aaKnown RBP12.64□□□□□ -0.39
ERCC1-205ENST00000587888 SFTPDP35247 375 aa12.64□□□□□ -0.39
ERCC1-205ENST00000587888 CCT5P48643 541 aa12.64□□□□□ -0.39
ERCC1-205ENST00000587888 RNF144AP50876 292 aaPredicted RBP12.64□□□□□ -0.39
ERCC1-205ENST00000587888 ATP5J2P56134 94 aa12.64□□□□□ -0.39
ERCC1-205ENST00000587888 CCDC153Q494R4 210 aa12.64□□□□□ -0.39
ERCC1-205ENST00000587888 RFTN2Q52LD8 501 aaPredicted RBP12.64□□□□□ -0.39
ERCC1-205ENST00000587888 Q6ZSR9 355 aa12.64□□□□□ -0.39
ERCC1-205ENST00000587888 ESPNLQ6ZVH7 1005 aa12.64□□□□□ -0.39
ERCC1-205ENST00000587888 ATP6V1C2Q8NEY4 427 aa12.64□□□□□ -0.39
ERCC1-205ENST00000587888 OR6Y1Q8NGX8 325 aa12.64□□□□□ -0.39
ERCC1-205ENST00000587888 OR2T11Q8NH01 316 aa12.64□□□□□ -0.39
ERCC1-205ENST00000587888 ACTRT2Q8TDY3 377 aa12.64□□□□□ -0.39
ERCC1-205ENST00000587888 JADE3Q92613 823 aa12.64□□□□□ -0.39
ERCC1-205ENST00000587888 GIMAP5Q96F15 307 aa12.64□□□□□ -0.39
ERCC1-205ENST00000587888 REXO5Q96IC2 774 aaKnown RBP12.64□□□□□ -0.39
ERCC1-205ENST00000587888 MS4A4EQ96PG1 132 aa12.64□□□□□ -0.39
ERCC1-205ENST00000587888 HHATLQ9HCP6 504 aa12.64□□□□□ -0.39
ERCC1-205ENST00000587888 UBQLN4Q9NRR5 601 aa12.64□□□□□ -0.39
ERCC1-205ENST00000587888 OXSMQ9NWU1 459 aa12.64□□□□□ -0.39
ERCC1-205ENST00000587888 LAMP3Q9UQV4 416 aa12.64□□□□□ -0.39
ERCC1-205ENST00000587888 GPR52Q9Y2T5 361 aa12.64□□□□□ -0.39
ERCC1-205ENST00000587888 ARID1AO14497 2285 aa12.64□□□□□ -0.39
ERCC1-205ENST00000587888 NGFRP08138 427 aa12.63□□□□□ -0.39
ERCC1-205ENST00000587888 PRPH2P23942 346 aa12.63□□□□□ -0.39
ERCC1-205ENST00000587888 SHC1P29353 583 aa12.63□□□□□ -0.39
ERCC1-205ENST00000587888 AGTR1P30556 359 aa12.63□□□□□ -0.39
ERCC1-205ENST00000587888 SERPINB4P48594 390 aa12.63□□□□□ -0.39
ERCC1-205ENST00000587888 TNK1Q13470 666 aa12.63□□□□□ -0.39
ERCC1-205ENST00000587888 CD226Q15762 336 aa12.63□□□□□ -0.39
ERCC1-205ENST00000587888 GALNTL6Q49A17 601 aa12.63□□□□□ -0.39
ERCC1-205ENST00000587888 TMEM201Q5SNT2 666 aa12.63□□□□□ -0.39
ERCC1-205ENST00000587888 LRIG3Q6UXM1 1119 aa12.63□□□□□ -0.39
ERCC1-205ENST00000587888 ZNF611Q8N823 705 aa12.63□□□□□ -0.39
ERCC1-205ENST00000587888 COX18Q8N8Q8 333 aa12.63□□□□□ -0.39
ERCC1-205ENST00000587888 RAB3IL1Q8TBN0 382 aa12.63□□□□□ -0.39
ERCC1-205ENST00000587888 IGFBPL1Q8WX77 278 aa12.63□□□□□ -0.39
ERCC1-205ENST00000587888 S100PBPQ96BU1 408 aa12.63□□□□□ -0.39
ERCC1-205ENST00000587888 METTL2AQ96IZ6 378 aaKnown RBP12.63□□□□□ -0.39
ERCC1-205ENST00000587888 CCT7Q99832 543 aa12.63□□□□□ -0.39
ERCC1-205ENST00000587888 RHOXF2Q9BQY4 288 aa12.63□□□□□ -0.39
ERCC1-205ENST00000587888 TACO1Q9BSH4 297 aaKnown RBP12.63□□□□□ -0.39
ERCC1-205ENST00000587888 ZNF701Q9NV72 531 aaPredicted RBP12.63□□□□□ -0.39
ERCC1-205ENST00000587888 GIN1Q9NXP7 522 aa12.63□□□□□ -0.39
ERCC1-205ENST00000587888 NTMQ9P121 344 aa12.63□□□□□ -0.39
ERCC1-205ENST00000587888 C7orf72A4D263 438 aa12.62□□□□□ -0.39
ERCC1-205ENST00000587888 SMIM23A6NLE4 172 aa12.62□□□□□ -0.39
ERCC1-205ENST00000587888 NPIPB8E9PQR5 432 aa12.62□□□□□ -0.39
ERCC1-205ENST00000587888 ZNF195O14628 629 aa12.62□□□□□ -0.39
ERCC1-205ENST00000587888 AZIN1O14977 448 aa12.62□□□□□ -0.39
ERCC1-205ENST00000587888 CLOCKO15516 846 aa12.62□□□□□ -0.39
ERCC1-205ENST00000587888 EFNA2O43921 213 aa12.62□□□□□ -0.39
ERCC1-205ENST00000587888 NUDT14O95848 222 aa12.62□□□□□ -0.39
ERCC1-205ENST00000587888 SHBGP04278 402 aa12.62□□□□□ -0.39
ERCC1-205ENST00000587888 LINGO3P0C6S8 592 aa12.62□□□□□ -0.39
ERCC1-205ENST00000587888 PAX1P15863 534 aa12.62□□□□□ -0.39
ERCC1-205ENST00000587888 FRKP42685 505 aaPredicted RBP12.62□□□□□ -0.39
ERCC1-205ENST00000587888 PRIM2P49643 509 aa12.62□□□□□ -0.39
ERCC1-205ENST00000587888 RPL38P63173 70 aaKnown RBP12.62□□□□□ -0.39
ERCC1-205ENST00000587888 POU6F2P78424 691 aaPredicted RBP12.62□□□□□ -0.39
ERCC1-205ENST00000587888 TMEM176BQ3YBM2 270 aaPredicted RBP12.62□□□□□ -0.39
ERCC1-205ENST00000587888 LIPMQ5VYY2 423 aa12.62□□□□□ -0.39
ERCC1-205ENST00000587888 NUFIP2Q7Z417 695 aaKnown RBP12.62□□□□□ -0.39
ERCC1-205ENST00000587888 TRABD2AQ86V40 505 aa12.62□□□□□ -0.39
ERCC1-205ENST00000587888 MISPQ8IVT2 679 aa12.62□□□□□ -0.39
ERCC1-205ENST00000587888 TUSC5Q8IXB3 177 aa12.62□□□□□ -0.39
ERCC1-205ENST00000587888 ZNF619Q8N2I2 560 aa12.62□□□□□ -0.39
ERCC1-205ENST00000587888 MAPK1IP1LQ8NDC0 245 aa12.62□□□□□ -0.39
ERCC1-205ENST00000587888 STEAP2Q8NFT2 490 aa12.62□□□□□ -0.39
ERCC1-205ENST00000587888 PHOSPHO1Q8TCT1 267 aa12.62□□□□□ -0.39
ERCC1-205ENST00000587888 ABHD3Q8WU67 409 aa12.62□□□□□ -0.39
ERCC1-205ENST00000587888 CDS1Q92903 461 aa12.62□□□□□ -0.39
ERCC1-205ENST00000587888 KLHL15Q96M94 604 aa12.62□□□□□ -0.39
ERCC1-205ENST00000587888 TMEM204Q9BSN7 226 aa12.62□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms