RNA–Protein interactions for RNA: ENST00000587256.1

ATG4D-207, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 5

Gene ATG4D, Length 607 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-207ENST00000587256 OR2M5A3KFT3 312 aa13.41□□□□□ -0.26
ATG4D-207ENST00000587256 CD8B2A6NJW9 211 aa13.41□□□□□ -0.26
ATG4D-207ENST00000587256 LINC01387J3KSC0 135 aa13.41□□□□□ -0.26
ATG4D-207ENST00000587256 RFXANKO14593 260 aa13.41□□□□□ -0.26
ATG4D-207ENST00000587256 SEC14L5O43304 696 aa13.41□□□□□ -0.26
ATG4D-207ENST00000587256 TNFRSF21O75509 655 aa13.41□□□□□ -0.26
ATG4D-207ENST00000587256 STX11O75558 287 aa13.41□□□□□ -0.26
ATG4D-207ENST00000587256 ANP32DO95626 131 aa13.41□□□□□ -0.26
ATG4D-207ENST00000587256 IL2RAP01589 272 aa13.41□□□□□ -0.26
ATG4D-207ENST00000587256 GSNP06396 782 aa13.41□□□□□ -0.26
ATG4D-207ENST00000587256 OR12D1P0DN82 309 aa13.41□□□□□ -0.26
ATG4D-207ENST00000587256 PEPDP12955 493 aa13.41□□□□□ -0.26
ATG4D-207ENST00000587256 CDKN2CP42773 168 aa13.41□□□□□ -0.26
ATG4D-207ENST00000587256 IDH3AP50213 366 aa13.41□□□□□ -0.26
ATG4D-207ENST00000587256 ANXA11P50995 505 aaKnown RBP13.41□□□□□ -0.26
ATG4D-207ENST00000587256 POLR2JP52435 117 aaKnown RBP13.41□□□□□ -0.26
ATG4D-207ENST00000587256 ATP12AP54707 1039 aa13.41□□□□□ -0.26
ATG4D-207ENST00000587256 CLDN18P56856 261 aa13.41□□□□□ -0.26
ATG4D-207ENST00000587256 B3GALT5-AS1P59052 145 aa13.41□□□□□ -0.26
ATG4D-207ENST00000587256 ZNF117Q03924 483 aa13.41□□□□□ -0.26
ATG4D-207ENST00000587256 GPR68Q15743 365 aa13.41□□□□□ -0.26
ATG4D-207ENST00000587256 ZNF621Q6ZSS3 439 aa13.41□□□□□ -0.26
ATG4D-207ENST00000587256 MTERF4Q7Z6M4 381 aaKnown RBP13.41□□□□□ -0.26
ATG4D-207ENST00000587256 RNF130Q86XS8 419 aa13.41□□□□□ -0.26
ATG4D-207ENST00000587256 MEIOBQ8N635 442 aa13.41□□□□□ -0.26
ATG4D-207ENST00000587256 TMCO5AQ8N6Q1 288 aa13.41□□□□□ -0.26
ATG4D-207ENST00000587256 CHDHQ8NE62 594 aaPredicted RBP13.41□□□□□ -0.26
ATG4D-207ENST00000587256 TNIP2Q8NFZ5 429 aa13.41□□□□□ -0.26
ATG4D-207ENST00000587256 B4GALNT2Q8NHY0 566 aa13.41□□□□□ -0.26
ATG4D-207ENST00000587256 ZPLD1Q8TCW7 415 aa13.41□□□□□ -0.26
ATG4D-207ENST00000587256 XAGE5Q8WWM1 108 aa13.41□□□□□ -0.26
ATG4D-207ENST00000587256 SMPDL3BQ92485 455 aa13.41□□□□□ -0.26
ATG4D-207ENST00000587256 RAB8BQ92930 207 aa13.41□□□□□ -0.26
ATG4D-207ENST00000587256 SDF2Q99470 211 aa13.41□□□□□ -0.26
ATG4D-207ENST00000587256 UCK2Q9BZX2 261 aa13.41□□□□□ -0.26
ATG4D-207ENST00000587256 RMND5AQ9H871 391 aa13.41□□□□□ -0.26
ATG4D-207ENST00000587256 NAV2Q8IVL1 2488 aa13.41□□□□□ -0.26
ATG4D-207ENST00000587256 A0A087WZY1 265 aa13.4□□□□□ -0.26
ATG4D-207ENST00000587256 FAM234BA2RU67 622 aa13.4□□□□□ -0.26
ATG4D-207ENST00000587256 MBD3L4A6NDZ8 208 aaPredicted RBP13.4□□□□□ -0.26
ATG4D-207ENST00000587256 MBD3L3A6NE82 208 aaPredicted RBP13.4□□□□□ -0.26
ATG4D-207ENST00000587256 MBD3L5A6NJ08 208 aaPredicted RBP13.4□□□□□ -0.26
ATG4D-207ENST00000587256 CLCA1A8K7I4 914 aa13.4□□□□□ -0.26
ATG4D-207ENST00000587256 SHISA8B8ZZ34 492 aa13.4□□□□□ -0.26
ATG4D-207ENST00000587256 GTPBP1O00178 669 aaKnown RBP13.4□□□□□ -0.26
ATG4D-207ENST00000587256 DVL2O14641 736 aa13.4□□□□□ -0.26
ATG4D-207ENST00000587256 TOXO94900 526 aa13.4□□□□□ -0.26
ATG4D-207ENST00000587256 NUDT14O95848 222 aa13.4□□□□□ -0.26
ATG4D-207ENST00000587256 ZNF17P17021 662 aa13.4□□□□□ -0.26
ATG4D-207ENST00000587256 BMP5P22003 454 aa13.4□□□□□ -0.26
ATG4D-207ENST00000587256 TIMP3P35625 211 aa13.4□□□□□ -0.26
ATG4D-207ENST00000587256 CCR4P51679 360 aa13.4□□□□□ -0.26
ATG4D-207ENST00000587256 SLC25A35Q3KQZ1 300 aa13.4□□□□□ -0.26
ATG4D-207ENST00000587256 ARHGAP11BQ3KRB8 267 aa13.4□□□□□ -0.26
ATG4D-207ENST00000587256 GLYR1Q49A26 553 aaPredicted RBP13.4□□□□□ -0.26
ATG4D-207ENST00000587256 C6orf10Q5SRN2 563 aa13.4□□□□□ -0.26
ATG4D-207ENST00000587256 DDX59Q5T1V6 619 aaKnown RBP eCLIP13.4□□□□□ -0.26
ATG4D-207ENST00000587256 PDZK1Q5T2W1 519 aa13.4□□□□□ -0.26
ATG4D-207ENST00000587256 MSANTD1Q6ZTZ1 278 aa13.4□□□□□ -0.26
ATG4D-207ENST00000587256 CHMP1BQ7LBR1 199 aa13.4□□□□□ -0.26
ATG4D-207ENST00000587256 OLIG3Q7RTU3 272 aa13.4□□□□□ -0.26
ATG4D-207ENST00000587256 GRAMD2AQ8IUY3 354 aa13.4□□□□□ -0.26
ATG4D-207ENST00000587256 NAXEQ8NCW5 288 aa13.4□□□□□ -0.26
ATG4D-207ENST00000587256 MBD3L2Q8NHZ7 208 aaPredicted RBP13.4□□□□□ -0.26
ATG4D-207ENST00000587256 PNPT1Q8TCS8 783 aaKnown RBP13.4□□□□□ -0.26
ATG4D-207ENST00000587256 THOC1Q96FV9 657 aaKnown RBP13.4□□□□□ -0.26
ATG4D-207ENST00000587256 CCDC28BQ9BUN5 200 aa13.4□□□□□ -0.26
ATG4D-207ENST00000587256 NMUR2Q9GZQ4 415 aa13.4□□□□□ -0.26
ATG4D-207ENST00000587256 ZNF350Q9GZX5 532 aa13.4□□□□□ -0.26
ATG4D-207ENST00000587256 CALHM2Q9HA72 323 aa13.4□□□□□ -0.26
ATG4D-207ENST00000587256 MED17Q9NVC6 651 aa13.4□□□□□ -0.26
ATG4D-207ENST00000587256 ZNF446Q9NWS9 450 aa13.4□□□□□ -0.26
ATG4D-207ENST00000587256 DTNAQ9Y4J8 743 aa13.4□□□□□ -0.26
ATG4D-207ENST00000587256 NOTCH2Q04721 2471 aa13.39□□□□□ -0.27
ATG4D-207ENST00000587256 NPIPB9F8W1W9 429 aa13.39□□□□□ -0.27
ATG4D-207ENST00000587256 UBL4AP11441 157 aa13.39□□□□□ -0.27
ATG4D-207ENST00000587256 BCL2A1Q16548 175 aa13.39□□□□□ -0.27
ATG4D-207ENST00000587256 PLPPR5Q32ZL2 321 aa13.39□□□□□ -0.27
ATG4D-207ENST00000587256 NDUFAF6Q330K2 333 aa13.39□□□□□ -0.27
ATG4D-207ENST00000587256 GPAT3Q53EU6 434 aa13.39□□□□□ -0.27
ATG4D-207ENST00000587256 KLHL26Q53HC5 615 aa13.39□□□□□ -0.27
ATG4D-207ENST00000587256 HSP90B2PQ58FF3 399 aa13.39□□□□□ -0.27
ATG4D-207ENST00000587256 HEPHL1Q6MZM0 1159 aa13.39□□□□□ -0.27
ATG4D-207ENST00000587256 MEX3BQ6ZN04 569 aaKnown RBP13.39□□□□□ -0.27
ATG4D-207ENST00000587256 C9orf106Q8NAJ2 232 aa13.39□□□□□ -0.27
ATG4D-207ENST00000587256 RFWD2Q8NHY2 731 aa13.39□□□□□ -0.27
ATG4D-207ENST00000587256 VPS33AQ96AX1 596 aa13.39□□□□□ -0.27
ATG4D-207ENST00000587256 ZBTB8AQ96BR9 441 aa13.39□□□□□ -0.27
ATG4D-207ENST00000587256 ROPN1LQ96C74 230 aa13.39□□□□□ -0.27
ATG4D-207ENST00000587256 ITCHQ96J02 903 aa13.39□□□□□ -0.27
ATG4D-207ENST00000587256 TM9SF2Q99805 663 aa13.39□□□□□ -0.27
ATG4D-207ENST00000587256 MKLN1Q9UL63 735 aa13.39□□□□□ -0.27
ATG4D-207ENST00000587256 CARD8Q9Y2G2 431 aa13.39□□□□□ -0.27
ATG4D-207ENST00000587256 ZNF337Q9Y3M9 751 aa13.39□□□□□ -0.27
ATG4D-207ENST00000587256 WDR45Q9Y484 360 aa13.39□□□□□ -0.27
ATG4D-207ENST00000587256 ARHGAP21Q5T5U3 1957 aa13.39□□□□□ -0.27
ATG4D-207ENST00000587256 UQCRHLA0A096LP55 91 aa13.38□□□□□ -0.27
ATG4D-207ENST00000587256 SERINC4A6NH21 518 aa13.38□□□□□ -0.27
ATG4D-207ENST00000587256 NR5A2O00482 541 aa13.38□□□□□ -0.27
ATG4D-207ENST00000587256 OIP5O43482 229 aa13.38□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms