RNA–Protein interactions for RNA: ENST00000586863.5

ATG4D-206, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 4

Gene ATG4D, Length 529 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-206ENST00000586863 VPS26BQ4G0F5 336 aa12.54□□□□□ -0.4
ATG4D-206ENST00000586863 RFTN2Q52LD8 501 aaPredicted RBP12.54□□□□□ -0.4
ATG4D-206ENST00000586863 MFSD12Q6NUT3 480 aa12.54□□□□□ -0.4
ATG4D-206ENST00000586863 C20orf204Q6ZNR8 217 aa12.54□□□□□ -0.4
ATG4D-206ENST00000586863 YTHDF3Q7Z739 585 aaKnown RBP12.54□□□□□ -0.4
ATG4D-206ENST00000586863 C10orf107Q8IVU9 208 aa12.54□□□□□ -0.4
ATG4D-206ENST00000586863 WDR75Q8IWA0 830 aaKnown RBP12.54□□□□□ -0.4
ATG4D-206ENST00000586863 C4orf33Q8N1A6 199 aa12.54□□□□□ -0.4
ATG4D-206ENST00000586863 OR6K3Q8NGY3 331 aa12.54□□□□□ -0.4
ATG4D-206ENST00000586863 CEP70Q8NHQ1 597 aa12.54□□□□□ -0.4
ATG4D-206ENST00000586863 ZFP28Q8NHY6 868 aa12.54□□□□□ -0.4
ATG4D-206ENST00000586863 POC1BQ8TC44 478 aa12.54□□□□□ -0.4
ATG4D-206ENST00000586863 FAM110BQ8TC76 370 aa12.54□□□□□ -0.4
ATG4D-206ENST00000586863 EPS8L3Q8TE67 593 aaKnown RBP12.54□□□□□ -0.4
ATG4D-206ENST00000586863 AENQ8WTP8 325 aaKnown RBP12.54□□□□□ -0.4
ATG4D-206ENST00000586863 CAVIN3Q969G5 261 aa12.54□□□□□ -0.4
ATG4D-206ENST00000586863 ZBED6CLQ96FA7 236 aaPredicted RBP12.54□□□□□ -0.4
ATG4D-206ENST00000586863 C16orf58Q96GQ5 468 aa12.54□□□□□ -0.4
ATG4D-206ENST00000586863 SH3YL1Q96HL8 342 aaPredicted RBP12.54□□□□□ -0.4
ATG4D-206ENST00000586863 RNF145Q96MT1 663 aa12.54□□□□□ -0.4
ATG4D-206ENST00000586863 PRRG4Q9BZD6 226 aa12.54□□□□□ -0.4
ATG4D-206ENST00000586863 TMEM185BQ9H7F4 350 aa12.54□□□□□ -0.4
ATG4D-206ENST00000586863 MED17Q9NVC6 651 aa12.54□□□□□ -0.4
ATG4D-206ENST00000586863 SH3BP4Q9P0V3 963 aa12.54□□□□□ -0.4
ATG4D-206ENST00000586863 BAIAP2L1Q9UHR4 511 aa12.54□□□□□ -0.4
ATG4D-206ENST00000586863 EMC9Q9Y3B6 208 aa12.54□□□□□ -0.4
ATG4D-206ENST00000586863 ABCA1O95477 2261 aa12.54□□□□□ -0.4
ATG4D-206ENST00000586863 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP12.53□□□□□ -0.4
ATG4D-206ENST00000586863 C7orf72A4D263 438 aa12.53□□□□□ -0.4
ATG4D-206ENST00000586863 TRIM64A6NGJ6 449 aa12.53□□□□□ -0.4
ATG4D-206ENST00000586863 TRIM64BA6NI03 449 aa12.53□□□□□ -0.4
ATG4D-206ENST00000586863 TMEM233B4DJY2 109 aa12.53□□□□□ -0.4
ATG4D-206ENST00000586863 COPEO14579 308 aa12.53□□□□□ -0.4
ATG4D-206ENST00000586863 TNFSF11O14788 317 aa12.53□□□□□ -0.4
ATG4D-206ENST00000586863 LSM1O15116 133 aaKnown RBP12.53□□□□□ -0.4
ATG4D-206ENST00000586863 ADAMDEC1O15204 470 aa12.53□□□□□ -0.4
ATG4D-206ENST00000586863 CXCL13O43927 109 aa12.53□□□□□ -0.4
ATG4D-206ENST00000586863 ERLIN1O75477 346 aa12.53□□□□□ -0.4
ATG4D-206ENST00000586863 PLGP00747 810 aaPredicted RBP12.53□□□□□ -0.4
ATG4D-206ENST00000586863 LINC00032P0C843 101 aa12.53□□□□□ -0.4
ATG4D-206ENST00000586863 NEFHP12036 1026 aa12.53□□□□□ -0.4
ATG4D-206ENST00000586863 PCLAFQ15004 111 aa12.53□□□□□ -0.4
ATG4D-206ENST00000586863 CD226Q15762 336 aa12.53□□□□□ -0.4
ATG4D-206ENST00000586863 EXOSC6Q5RKV6 272 aaKnown RBP12.53□□□□□ -0.4
ATG4D-206ENST00000586863 CCNJQ5T5M9 372 aa12.53□□□□□ -0.4
ATG4D-206ENST00000586863 KANK2Q63ZY3 851 aa12.53□□□□□ -0.4
ATG4D-206ENST00000586863 STAC2Q6ZMT1 411 aa12.53□□□□□ -0.4
ATG4D-206ENST00000586863 RNF165Q6ZSG1 346 aa12.53□□□□□ -0.4
ATG4D-206ENST00000586863 TDRPQ86YL5 185 aa12.53□□□□□ -0.4
ATG4D-206ENST00000586863 OR2V1Q8NHB1 315 aa12.53□□□□□ -0.4
ATG4D-206ENST00000586863 ZBTB8AQ96BR9 441 aa12.53□□□□□ -0.4
ATG4D-206ENST00000586863 GMPPAQ96IJ6 420 aaPredicted RBP12.53□□□□□ -0.4
ATG4D-206ENST00000586863 GATA5Q9BWX5 397 aaPredicted RBP12.53□□□□□ -0.4
ATG4D-206ENST00000586863 PLSCR4Q9NRQ2 329 aa12.53□□□□□ -0.4
ATG4D-206ENST00000586863 ACSS1Q9NUB1 689 aaPredicted RBP12.53□□□□□ -0.4
ATG4D-206ENST00000586863 RAB21Q9UL25 225 aa12.53□□□□□ -0.4
ATG4D-206ENST00000586863 MCTS1Q9ULC4 181 aaKnown RBP12.53□□□□□ -0.4
ATG4D-206ENST00000586863 RTTNQ86VV8 2226 aa12.53□□□□□ -0.4
ATG4D-206ENST00000586863 A0A0J9YW62 118 aa12.52□□□□□ -0.41
ATG4D-206ENST00000586863 TLDC2A0PJX2 215 aa12.52□□□□□ -0.41
ATG4D-206ENST00000586863 KLF4O43474 513 aa12.52□□□□□ -0.41
ATG4D-206ENST00000586863 CHRNGP07510 517 aa12.52□□□□□ -0.41
ATG4D-206ENST00000586863 KRT4P19013 534 aa12.52□□□□□ -0.41
ATG4D-206ENST00000586863 IL11P20809 199 aa12.52□□□□□ -0.41
ATG4D-206ENST00000586863 SHC1P29353 583 aa12.52□□□□□ -0.41
ATG4D-206ENST00000586863 CTBP2P56545 445 aa12.52□□□□□ -0.41
ATG4D-206ENST00000586863 RAC1P63000 192 aa12.52□□□□□ -0.41
ATG4D-206ENST00000586863 GALNTL6Q49A17 601 aa12.52□□□□□ -0.41
ATG4D-206ENST00000586863 BEX5Q5H9J7 111 aa12.52□□□□□ -0.41
ATG4D-206ENST00000586863 PRSS57Q6UWY2 283 aa12.52□□□□□ -0.41
ATG4D-206ENST00000586863 COX18Q8N8Q8 333 aa12.52□□□□□ -0.41
ATG4D-206ENST00000586863 OR6Y1Q8NGX8 325 aa12.52□□□□□ -0.41
ATG4D-206ENST00000586863 ACTRT2Q8TDY3 377 aa12.52□□□□□ -0.41
ATG4D-206ENST00000586863 IGFBPL1Q8WX77 278 aa12.52□□□□□ -0.41
ATG4D-206ENST00000586863 JADE3Q92613 823 aa12.52□□□□□ -0.41
ATG4D-206ENST00000586863 FAM120BQ96EK7 910 aaKnown RBP12.52□□□□□ -0.41
ATG4D-206ENST00000586863 SIRT3Q9NTG7 399 aaPredicted RBP12.52□□□□□ -0.41
ATG4D-206ENST00000586863 STOML1Q9UBI4 398 aa12.52□□□□□ -0.41
ATG4D-206ENST00000586863 GIMAP2Q9UG22 337 aa12.52□□□□□ -0.41
ATG4D-206ENST00000586863 DNAJC15Q9Y5T4 150 aa12.52□□□□□ -0.41
ATG4D-206ENST00000586863 SMAD7O15105 426 aaKnown RBP12.51□□□□□ -0.41
ATG4D-206ENST00000586863 SYNGR4O95473 234 aa12.51□□□□□ -0.41
ATG4D-206ENST00000586863 PLAUP00749 431 aa12.51□□□□□ -0.41
ATG4D-206ENST00000586863 ALOX5P09917 674 aa12.51□□□□□ -0.41
ATG4D-206ENST00000586863 NUDT17P0C025 328 aa12.51□□□□□ -0.41
ATG4D-206ENST00000586863 BCKDHAP12694 445 aa12.51□□□□□ -0.41
ATG4D-206ENST00000586863 AGTR1P30556 359 aa12.51□□□□□ -0.41
ATG4D-206ENST00000586863 PTH2RP49190 550 aa12.51□□□□□ -0.41
ATG4D-206ENST00000586863 PRIM2P49643 509 aa12.51□□□□□ -0.41
ATG4D-206ENST00000586863 RNF144AP50876 292 aaPredicted RBP12.51□□□□□ -0.41
ATG4D-206ENST00000586863 ZNF41P51814 821 aaPredicted RBP12.51□□□□□ -0.41
ATG4D-206ENST00000586863 ZNF844Q08AG5 666 aa12.51□□□□□ -0.41
ATG4D-206ENST00000586863 FOXF1Q12946 379 aa12.51□□□□□ -0.41
ATG4D-206ENST00000586863 LASP1Q14847 261 aaKnown RBP12.51□□□□□ -0.41
ATG4D-206ENST00000586863 CPTPQ5TA50 214 aa12.51□□□□□ -0.41
ATG4D-206ENST00000586863 HBMQ6B0K9 141 aa12.51□□□□□ -0.41
ATG4D-206ENST00000586863 ZNF704Q6ZNC4 412 aaPredicted RBP12.51□□□□□ -0.41
ATG4D-206ENST00000586863 ESPNLQ6ZVH7 1005 aa12.51□□□□□ -0.41
ATG4D-206ENST00000586863 MISPQ8IVT2 679 aa12.51□□□□□ -0.41
ATG4D-206ENST00000586863 B4GALNT2Q8NHY0 566 aa12.51□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms