RNA–Protein interactions for RNA: ENST00000586385.5

BRCA1-225, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 781 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-225ENST00000586385 ZNF239Q16600 458 aaKnown RBP10.56□□□□□ -0.72
BRCA1-225ENST00000586385 GLE1Q53GS7 698 aaKnown RBP10.56□□□□□ -0.72
BRCA1-225ENST00000586385 ZNF385BQ569K4 471 aa10.56□□□□□ -0.72
BRCA1-225ENST00000586385 SFRP5Q5T4F7 317 aa10.56□□□□□ -0.72
BRCA1-225ENST00000586385 CPTPQ5TA50 214 aa10.56□□□□□ -0.72
BRCA1-225ENST00000586385 HBMQ6B0K9 141 aa10.56□□□□□ -0.72
BRCA1-225ENST00000586385 ANKRD26P1Q6NSI1 321 aa10.56□□□□□ -0.72
BRCA1-225ENST00000586385 ESPNLQ6ZVH7 1005 aa10.56□□□□□ -0.72
BRCA1-225ENST00000586385 TUSC5Q8IXB3 177 aa10.56□□□□□ -0.72
BRCA1-225ENST00000586385 C17orf53Q8N3J3 647 aaPredicted RBP10.56□□□□□ -0.72
BRCA1-225ENST00000586385 STEAP2Q8NFT2 490 aa10.56□□□□□ -0.72
BRCA1-225ENST00000586385 ACTRT2Q8TDY3 377 aa10.56□□□□□ -0.72
BRCA1-225ENST00000586385 ZBTB8AQ96BR9 441 aa10.56□□□□□ -0.72
BRCA1-225ENST00000586385 L3HYPDHQ96EM0 354 aa10.56□□□□□ -0.72
BRCA1-225ENST00000586385 ZBED6CLQ96FA7 236 aaPredicted RBP10.56□□□□□ -0.72
BRCA1-225ENST00000586385 SH3YL1Q96HL8 342 aaPredicted RBP10.56□□□□□ -0.72
BRCA1-225ENST00000586385 TRAF4Q9BUZ4 470 aaPredicted RBP10.56□□□□□ -0.72
BRCA1-225ENST00000586385 PAQR5Q9NXK6 330 aaPredicted RBP10.56□□□□□ -0.72
BRCA1-225ENST00000586385 ING1Q9UK53 422 aaPredicted RBP10.56□□□□□ -0.72
BRCA1-225ENST00000586385 NBEAL1Q6ZS30 2694 aa10.56□□□□□ -0.72
BRCA1-225ENST00000586385 IGHV4-30-2A0A087WSY4 118 aa10.55□□□□□ -0.72
BRCA1-225ENST00000586385 SHISA9B4DS77 424 aa10.55□□□□□ -0.72
BRCA1-225ENST00000586385 NDUFB5O43674 189 aa10.55□□□□□ -0.72
BRCA1-225ENST00000586385 RAMP1O60894 148 aa10.55□□□□□ -0.72
BRCA1-225ENST00000586385 KCNK2O95069 426 aa10.55□□□□□ -0.72
BRCA1-225ENST00000586385 SYNGR4O95473 234 aa10.55□□□□□ -0.72
BRCA1-225ENST00000586385 CD3EP07766 207 aa10.55□□□□□ -0.72
BRCA1-225ENST00000586385 PTNP21246 168 aa10.55□□□□□ -0.72
BRCA1-225ENST00000586385 ATP5F1P24539 256 aaPredicted RBP10.55□□□□□ -0.72
BRCA1-225ENST00000586385 NTSP30990 170 aa10.55□□□□□ -0.72
BRCA1-225ENST00000586385 PRIM2P49643 509 aa10.55□□□□□ -0.72
BRCA1-225ENST00000586385 CLK3P49761 638 aaKnown RBP10.55□□□□□ -0.72
BRCA1-225ENST00000586385 MANFP55145 182 aaKnown RBP10.55□□□□□ -0.72
BRCA1-225ENST00000586385 PKNOX1P55347 436 aa10.55□□□□□ -0.72
BRCA1-225ENST00000586385 BSPH1Q075Z2 132 aa10.55□□□□□ -0.72
BRCA1-225ENST00000586385 FOXF1Q12946 379 aa10.55□□□□□ -0.72
BRCA1-225ENST00000586385 KIAA0040Q15053 153 aa10.55□□□□□ -0.72
BRCA1-225ENST00000586385 ZNHIT3Q15649 155 aaPredicted RBP10.55□□□□□ -0.72
BRCA1-225ENST00000586385 PODNL1Q6PEZ8 512 aa10.55□□□□□ -0.72
BRCA1-225ENST00000586385 TIFABQ6ZNK6 161 aa10.55□□□□□ -0.72
BRCA1-225ENST00000586385 DTX2Q86UW9 622 aa10.55□□□□□ -0.72
BRCA1-225ENST00000586385 STK32CQ86UX6 486 aa10.55□□□□□ -0.72
BRCA1-225ENST00000586385 TRABD2AQ86V40 505 aa10.55□□□□□ -0.72
BRCA1-225ENST00000586385 CEP112Q8N8E3 955 aa10.55□□□□□ -0.72
BRCA1-225ENST00000586385 SLC16A11Q8NCK7 471 aa10.55□□□□□ -0.72
BRCA1-225ENST00000586385 FBXO30Q8TB52 745 aa10.55□□□□□ -0.72
BRCA1-225ENST00000586385 PIWIL2Q8TC59 973 aaKnown RBP10.55□□□□□ -0.72
BRCA1-225ENST00000586385 GPR151Q8TDV0 419 aa10.55□□□□□ -0.72
BRCA1-225ENST00000586385 CIDECQ96AQ7 238 aaPredicted RBP10.55□□□□□ -0.72
BRCA1-225ENST00000586385 TRMT61AQ96FX7 289 aaKnown RBP10.55□□□□□ -0.72
BRCA1-225ENST00000586385 KLHL15Q96M94 604 aa10.55□□□□□ -0.72
BRCA1-225ENST00000586385 TACO1Q9BSH4 297 aaKnown RBP10.55□□□□□ -0.72
BRCA1-225ENST00000586385 COQ10BQ9H8M1 238 aa10.55□□□□□ -0.72
BRCA1-225ENST00000586385 MIEF1Q9NQG6 463 aa10.55□□□□□ -0.72
BRCA1-225ENST00000586385 NTMQ9P121 344 aa10.55□□□□□ -0.72
BRCA1-225ENST00000586385 KLHL13Q9P2N7 655 aa10.55□□□□□ -0.72
BRCA1-225ENST00000586385 MRTO4Q9UKD2 239 aaKnown RBP10.55□□□□□ -0.72
BRCA1-225ENST00000586385 TTC36A6NLP5 189 aa10.54□□□□□ -0.72
BRCA1-225ENST00000586385 PHF1O43189 567 aaPredicted RBP10.54□□□□□ -0.72
BRCA1-225ENST00000586385 KCNH1O95259 989 aa10.54□□□□□ -0.72
BRCA1-225ENST00000586385 ADAP00813 363 aa10.54□□□□□ -0.72
BRCA1-225ENST00000586385 SNRPAP09012 282 aaKnown RBP10.54□□□□□ -0.72
BRCA1-225ENST00000586385 PRPS2P11908 318 aa10.54□□□□□ -0.72
BRCA1-225ENST00000586385 SFTPDP35247 375 aa10.54□□□□□ -0.72
BRCA1-225ENST00000586385 PSMD4P55036 377 aaKnown RBP10.54□□□□□ -0.72
BRCA1-225ENST00000586385 CARD18P57730 90 aa10.54□□□□□ -0.72
BRCA1-225ENST00000586385 HSPB3Q12988 150 aa10.54□□□□□ -0.72
BRCA1-225ENST00000586385 DUSP5Q16690 384 aa10.54□□□□□ -0.72
BRCA1-225ENST00000586385 FREM1Q5H8C1 2179 aa10.54□□□□□ -0.72
BRCA1-225ENST00000586385 SPDYAQ5MJ70 313 aa10.54□□□□□ -0.72
BRCA1-225ENST00000586385 CCNJQ5T5M9 372 aa10.54□□□□□ -0.72
BRCA1-225ENST00000586385 NOXRED1Q6NXP6 359 aa10.54□□□□□ -0.72
BRCA1-225ENST00000586385 C8orf74Q6P047 294 aa10.54□□□□□ -0.72
BRCA1-225ENST00000586385 TRIM46Q7Z4K8 759 aa10.54□□□□□ -0.72
BRCA1-225ENST00000586385 ALPK2Q86TB3 2170 aa10.54□□□□□ -0.72
BRCA1-225ENST00000586385 LILRA2Q8N149 483 aa10.54□□□□□ -0.72
BRCA1-225ENST00000586385 GTPBP3Q969Y2 492 aaKnown RBP10.54□□□□□ -0.72
BRCA1-225ENST00000586385 OTUB1Q96FW1 271 aaPredicted RBP10.54□□□□□ -0.72
BRCA1-225ENST00000586385 C16orf58Q96GQ5 468 aa10.54□□□□□ -0.72
BRCA1-225ENST00000586385 HDHD5Q9BXW7 423 aa10.54□□□□□ -0.72
BRCA1-225ENST00000586385 LRTM1Q9HBL6 345 aa10.54□□□□□ -0.72
BRCA1-225ENST00000586385 MID1IP1Q9NPA3 183 aa10.54□□□□□ -0.72
BRCA1-225ENST00000586385 NPAP1Q9NZP6 1156 aa10.54□□□□□ -0.72
BRCA1-225ENST00000586385 STOML1Q9UBI4 398 aa10.54□□□□□ -0.72
BRCA1-225ENST00000586385 EMCNQ9ULC0 261 aa10.54□□□□□ -0.72
BRCA1-225ENST00000586385 B3GALT5Q9Y2C3 310 aa10.54□□□□□ -0.72
BRCA1-225ENST00000586385 PTGDR2Q9Y5Y4 395 aa10.54□□□□□ -0.72
BRCA1-225ENST00000586385 UQCRHLA0A096LP55 91 aa10.53□□□□□ -0.72
BRCA1-225ENST00000586385 A0A1W2PP18 115 aa10.53□□□□□ -0.72
BRCA1-225ENST00000586385 A8MV72 311 aaPredicted RBP10.53□□□□□ -0.72
BRCA1-225ENST00000586385 TP53P04637 393 aaPredicted RBP10.53□□□□□ -0.72
BRCA1-225ENST00000586385 TAC1P20366 129 aa10.53□□□□□ -0.72
BRCA1-225ENST00000586385 ENPP1P22413 925 aa10.53□□□□□ -0.72
BRCA1-225ENST00000586385 CASQ1P31415 396 aa10.53□□□□□ -0.72
BRCA1-225ENST00000586385 FRKP42685 505 aaPredicted RBP10.53□□□□□ -0.72
BRCA1-225ENST00000586385 RNF144AP50876 292 aaPredicted RBP10.53□□□□□ -0.72
BRCA1-225ENST00000586385 ZNF41P51814 821 aaPredicted RBP10.53□□□□□ -0.72
BRCA1-225ENST00000586385 C21orf58P58505 322 aa10.53□□□□□ -0.72
BRCA1-225ENST00000586385 ZNF117Q03924 483 aa10.53□□□□□ -0.72
BRCA1-225ENST00000586385 TOMM34Q15785 309 aaPredicted RBP10.53□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms