RNA–Protein interactions for RNA: ENST00000585740.5

LIG3-204, Transcript of DNA ligase 3, humanhuman

TSL 3

Gene LIG3, Length 887 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG3-204ENST00000585740 IGFBP1P08833 259 aaPredicted RBP10.43□□□□□ -0.74
LIG3-204ENST00000585740 DBTP11182 482 aaKnown RBP10.43□□□□□ -0.74
LIG3-204ENST00000585740 RBM34P42696 430 aaKnown RBP10.43□□□□□ -0.74
LIG3-204ENST00000585740 CLK1P49759 484 aaKnown RBP10.43□□□□□ -0.74
LIG3-204ENST00000585740 ATP12AP54707 1039 aa10.43□□□□□ -0.74
LIG3-204ENST00000585740 EFNB1P98172 346 aa10.43□□□□□ -0.74
LIG3-204ENST00000585740 MAT1AQ00266 395 aaKnown RBP10.43□□□□□ -0.74
LIG3-204ENST00000585740 PSG6Q00889 435 aa10.43□□□□□ -0.74
LIG3-204ENST00000585740 ZNF91Q05481 1191 aa10.43□□□□□ -0.74
LIG3-204ENST00000585740 BNIP3Q12983 259 aa10.43□□□□□ -0.74
LIG3-204ENST00000585740 CPEB4Q17RY0 729 aaKnown RBP eCLIP10.43□□□□□ -0.74
LIG3-204ENST00000585740 ZNF829Q3KNS6 432 aaPredicted RBP10.43□□□□□ -0.74
LIG3-204ENST00000585740 AMZ1Q400G9 498 aa10.43□□□□□ -0.74
LIG3-204ENST00000585740 ARMCX4Q5H9R4 360 aa10.43□□□□□ -0.74
LIG3-204ENST00000585740 NKAIN2Q5VXU1 208 aa10.43□□□□□ -0.74
LIG3-204ENST00000585740 ACSM5Q6NUN0 579 aa10.43□□□□□ -0.74
LIG3-204ENST00000585740 QSOX2Q6ZRP7 698 aa10.43□□□□□ -0.74
LIG3-204ENST00000585740 KIF18BQ86Y91 864 aa10.43□□□□□ -0.74
LIG3-204ENST00000585740 NRMQ8IXM6 262 aa10.43□□□□□ -0.74
LIG3-204ENST00000585740 SLC35F3Q8IY50 421 aa10.43□□□□□ -0.74
LIG3-204ENST00000585740 ZNF440Q8IYI8 595 aa10.43□□□□□ -0.74
LIG3-204ENST00000585740 IQCF1Q8N6M8 205 aa10.43□□□□□ -0.74
LIG3-204ENST00000585740 DTWD2Q8NBA8 298 aa10.43□□□□□ -0.74
LIG3-204ENST00000585740 KBTBD8Q8NFY9 601 aa10.43□□□□□ -0.74
LIG3-204ENST00000585740 DOK4Q8TEW6 326 aa10.43□□□□□ -0.74
LIG3-204ENST00000585740 TMEM239Q8WW34 195 aa10.43□□□□□ -0.74
LIG3-204ENST00000585740 RFKQ969G6 155 aa10.43□□□□□ -0.74
LIG3-204ENST00000585740 LGALS12Q96DT0 336 aa10.43□□□□□ -0.74
LIG3-204ENST00000585740 PLEKHA8Q96JA3 519 aa10.43□□□□□ -0.74
LIG3-204ENST00000585740 SLC41A2Q96JW4 573 aa10.43□□□□□ -0.74
LIG3-204ENST00000585740 ART5Q96L15 291 aa10.43□□□□□ -0.74
LIG3-204ENST00000585740 GPA33Q99795 319 aa10.43□□□□□ -0.74
LIG3-204ENST00000585740 CNPPD1Q9BV87 410 aa10.43□□□□□ -0.74
LIG3-204ENST00000585740 PRR14Q9BWN1 585 aa10.43□□□□□ -0.74
LIG3-204ENST00000585740 MND1Q9BWT6 205 aa10.43□□□□□ -0.74
LIG3-204ENST00000585740 HOXD1Q9GZZ0 328 aa10.43□□□□□ -0.74
LIG3-204ENST00000585740 OR10A5Q9H207 317 aa10.43□□□□□ -0.74
LIG3-204ENST00000585740 PALMDQ9NP74 551 aa10.43□□□□□ -0.74
LIG3-204ENST00000585740 CHCHD3Q9NX63 227 aaKnown RBP10.43□□□□□ -0.74
LIG3-204ENST00000585740 IL20Q9NYY1 176 aa10.43□□□□□ -0.74
LIG3-204ENST00000585740 SELENONQ9NZV5 590 aa10.43□□□□□ -0.74
LIG3-204ENST00000585740 KLHL3Q9UH77 587 aa10.43□□□□□ -0.74
LIG3-204ENST00000585740 SERTAD3Q9UJW9 196 aa10.43□□□□□ -0.74
LIG3-204ENST00000585740 MRTO4Q9UKD2 239 aaKnown RBP10.43□□□□□ -0.74
LIG3-204ENST00000585740 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP10.43□□□□□ -0.74
LIG3-204ENST00000585740 ERVK-19Q9WJR5 959 aa10.43□□□□□ -0.74
LIG3-204ENST00000585740 MED31Q9Y3C7 131 aa10.43□□□□□ -0.74
LIG3-204ENST00000585740 KMT2BQ9UMN6 2715 aaPredicted RBP10.43□□□□□ -0.74
LIG3-204ENST00000585740 CACNA1GO43497 2377 aa10.43□□□□□ -0.74
LIG3-204ENST00000585740 TPRP12270 2363 aaKnown RBP10.42□□□□□ -0.74
LIG3-204ENST00000585740 UNC119BA6NIH7 251 aa10.42□□□□□ -0.74
LIG3-204ENST00000585740 EFCAB7A8K855 629 aa10.42□□□□□ -0.74
LIG3-204ENST00000585740 EFCAB9A8MZ26 197 aa10.42□□□□□ -0.74
LIG3-204ENST00000585740 KDM4EB2RXH2 506 aaPredicted RBP10.42□□□□□ -0.74
LIG3-204ENST00000585740 TGFBR3LH3BV60 316 aa10.42□□□□□ -0.74
LIG3-204ENST00000585740 DSCR3O14972 297 aa10.42□□□□□ -0.74
LIG3-204ENST00000585740 CHP2O43745 196 aa10.42□□□□□ -0.74
LIG3-204ENST00000585740 AIREO43918 545 aa10.42□□□□□ -0.74
LIG3-204ENST00000585740 PRKYO43930 277 aa10.42□□□□□ -0.74
LIG3-204ENST00000585740 RCBTB2O95199 551 aa10.42□□□□□ -0.74
LIG3-204ENST00000585740 PTHP01270 115 aa10.42□□□□□ -0.74
LIG3-204ENST00000585740 THY1P04216 161 aa10.42□□□□□ -0.74
LIG3-204ENST00000585740 HTR2AP28223 471 aa10.42□□□□□ -0.74
LIG3-204ENST00000585740 LCN1P31025 176 aa10.42□□□□□ -0.74
LIG3-204ENST00000585740 SSTR4P31391 388 aa10.42□□□□□ -0.74
LIG3-204ENST00000585740 GRK5P34947 590 aa10.42□□□□□ -0.74
LIG3-204ENST00000585740 CTBP2P56545 445 aa10.42□□□□□ -0.74
LIG3-204ENST00000585740 DCAF7P61962 342 aa10.42□□□□□ -0.74
LIG3-204ENST00000585740 BTG2P78543 158 aa10.42□□□□□ -0.74
LIG3-204ENST00000585740 HOXC5Q00444 222 aa10.42□□□□□ -0.74
LIG3-204ENST00000585740 PRKCDQ05655 676 aa10.42□□□□□ -0.74
LIG3-204ENST00000585740 C1DQ13901 141 aaKnown RBP10.42□□□□□ -0.74
LIG3-204ENST00000585740 DSG2Q14126 1118 aa10.42□□□□□ -0.74
LIG3-204ENST00000585740 FGFBP1Q14512 234 aa10.42□□□□□ -0.74
LIG3-204ENST00000585740 PGGHGQ32M88 737 aa10.42□□□□□ -0.74
LIG3-204ENST00000585740 MINDY4Q4G0A6 757 aa10.42□□□□□ -0.74
LIG3-204ENST00000585740 SYT14P1Q58G82 188 aa10.42□□□□□ -0.74
LIG3-204ENST00000585740 ZNF620Q6ZNG0 422 aa10.42□□□□□ -0.74
LIG3-204ENST00000585740 USP43Q70EL4 1123 aa10.42□□□□□ -0.74
LIG3-204ENST00000585740 ADCK1Q86TW2 530 aa10.42□□□□□ -0.74
LIG3-204ENST00000585740 SLCO6A1Q86UG4 719 aa10.42□□□□□ -0.74
LIG3-204ENST00000585740 SLITRK4Q8IW52 837 aa10.42□□□□□ -0.74
LIG3-204ENST00000585740 SLC25A45Q8N413 288 aa10.42□□□□□ -0.74
LIG3-204ENST00000585740 POGLUT1Q8NBL1 392 aa10.42□□□□□ -0.74
LIG3-204ENST00000585740 PROKR2Q8NFJ6 384 aa10.42□□□□□ -0.74
LIG3-204ENST00000585740 OR2T33Q8NG76 320 aa10.42□□□□□ -0.74
LIG3-204ENST00000585740 OR52L1Q8NGH7 329 aa10.42□□□□□ -0.74
LIG3-204ENST00000585740 OR9Q1Q8NGQ5 310 aa10.42□□□□□ -0.74
LIG3-204ENST00000585740 BRIX1Q8TDN6 353 aaKnown RBP10.42□□□□□ -0.74
LIG3-204ENST00000585740 TMEM255BQ8WV15 326 aa10.42□□□□□ -0.74
LIG3-204ENST00000585740 S100ZQ8WXG8 99 aa10.42□□□□□ -0.74
LIG3-204ENST00000585740 ZHX1-C8orf76Q96EF9 292 aa10.42□□□□□ -0.74
LIG3-204ENST00000585740 VMP1Q96GC9 406 aa10.42□□□□□ -0.74
LIG3-204ENST00000585740 ZNF582Q96NG8 517 aaPredicted RBP10.42□□□□□ -0.74
LIG3-204ENST00000585740 PTCHD1Q96NR3 888 aa10.42□□□□□ -0.74
LIG3-204ENST00000585740 SLC46A1Q96NT5 459 aa10.42□□□□□ -0.74
LIG3-204ENST00000585740 CCNL2Q96S94 520 aaPredicted RBP10.42□□□□□ -0.74
LIG3-204ENST00000585740 DPYSL5Q9BPU6 564 aa10.42□□□□□ -0.74
LIG3-204ENST00000585740 PRSS27Q9BQR3 290 aa10.42□□□□□ -0.74
LIG3-204ENST00000585740 NDC1Q9BTX1 674 aa10.42□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms