RNA–Protein interactions for RNA: ENST00000585540.1

PRKCSH-202, Transcript of protein kinase C substrate 80K-H, humanhuman

TSL 3

Gene PRKCSH, Length 501 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-202ENST00000585540 EIPR1Q53HC9 387 aa12.54□□□□□ -0.4
PRKCSH-202ENST00000585540 COQ5Q5HYK3 327 aa12.54□□□□□ -0.4
PRKCSH-202ENST00000585540 EMC4Q5J8M3 183 aa12.54□□□□□ -0.4
PRKCSH-202ENST00000585540 WIPI1Q5MNZ9 446 aaPredicted RBP12.54□□□□□ -0.4
PRKCSH-202ENST00000585540 CCNJQ5T5M9 372 aa12.54□□□□□ -0.4
PRKCSH-202ENST00000585540 RIPPLY2Q5TAB7 128 aa12.54□□□□□ -0.4
PRKCSH-202ENST00000585540 EEF1A1P5Q5VTE0 462 aa12.54□□□□□ -0.4
PRKCSH-202ENST00000585540 SPATA21Q7Z572 469 aa12.54□□□□□ -0.4
PRKCSH-202ENST00000585540 MRGPRGQ86SM5 289 aa12.54□□□□□ -0.4
PRKCSH-202ENST00000585540 MARCH3Q86UD3 253 aa12.54□□□□□ -0.4
PRKCSH-202ENST00000585540 RNF130Q86XS8 419 aa12.54□□□□□ -0.4
PRKCSH-202ENST00000585540 B4GALNT2Q8NHY0 566 aa12.54□□□□□ -0.4
PRKCSH-202ENST00000585540 XAGE5Q8WWM1 108 aa12.54□□□□□ -0.4
PRKCSH-202ENST00000585540 ITLN2Q8WWU7 325 aaPredicted RBP12.54□□□□□ -0.4
PRKCSH-202ENST00000585540 GTF2H4Q92759 462 aa12.54□□□□□ -0.4
PRKCSH-202ENST00000585540 ROPN1LQ96C74 230 aa12.54□□□□□ -0.4
PRKCSH-202ENST00000585540 UCN2Q96RP3 112 aa12.54□□□□□ -0.4
PRKCSH-202ENST00000585540 UGT2B28Q9BY64 529 aa12.54□□□□□ -0.4
PRKCSH-202ENST00000585540 DSN1Q9H410 356 aa12.54□□□□□ -0.4
PRKCSH-202ENST00000585540 SERHL2Q9H4I8 314 aa12.54□□□□□ -0.4
PRKCSH-202ENST00000585540 TPT1P8Q9HAU6 139 aa12.54□□□□□ -0.4
PRKCSH-202ENST00000585540 CACYBPQ9HB71 228 aaKnown RBP12.54□□□□□ -0.4
PRKCSH-202ENST00000585540 PNPLA3Q9NST1 481 aa12.54□□□□□ -0.4
PRKCSH-202ENST00000585540 AP4B1Q9Y6B7 739 aa12.54□□□□□ -0.4
PRKCSH-202ENST00000585540 NCKAP5O14513 1909 aa12.53□□□□□ -0.4
PRKCSH-202ENST00000585540 DOPEY2Q9Y3R5 2298 aa12.53□□□□□ -0.4
PRKCSH-202ENST00000585540 BBIP1A8MTZ0 92 aa12.53□□□□□ -0.4
PRKCSH-202ENST00000585540 HMGN4O00479 90 aa12.53□□□□□ -0.4
PRKCSH-202ENST00000585540 ZG16O60844 167 aa12.53□□□□□ -0.4
PRKCSH-202ENST00000585540 EPPINO95925 133 aa12.53□□□□□ -0.4
PRKCSH-202ENST00000585540 GSNP06396 782 aa12.53□□□□□ -0.4
PRKCSH-202ENST00000585540 BMP2P12643 396 aa12.53□□□□□ -0.4
PRKCSH-202ENST00000585540 GP1BBP13224 206 aa12.53□□□□□ -0.4
PRKCSH-202ENST00000585540 HK1P19367 917 aa12.53□□□□□ -0.4
PRKCSH-202ENST00000585540 CHRNB4P30926 498 aa12.53□□□□□ -0.4
PRKCSH-202ENST00000585540 TIMP3P35625 211 aa12.53□□□□□ -0.4
PRKCSH-202ENST00000585540 CRISP3P54108 245 aa12.53□□□□□ -0.4
PRKCSH-202ENST00000585540 STX5Q13190 355 aa12.53□□□□□ -0.4
PRKCSH-202ENST00000585540 GTDC1Q4AE62 458 aa12.53□□□□□ -0.4
PRKCSH-202ENST00000585540 RAET1LQ5VY80 246 aa12.53□□□□□ -0.4
PRKCSH-202ENST00000585540 ZNF585AQ6P3V2 769 aa12.53□□□□□ -0.4
PRKCSH-202ENST00000585540 TNFAIP8L2Q6P589 184 aaPredicted RBP12.53□□□□□ -0.4
PRKCSH-202ENST00000585540 SLC2A7Q6PXP3 512 aa12.53□□□□□ -0.4
PRKCSH-202ENST00000585540 YRDCQ86U90 279 aaKnown RBP12.53□□□□□ -0.4
PRKCSH-202ENST00000585540 ULK2Q8IYT8 1036 aa12.53□□□□□ -0.4
PRKCSH-202ENST00000585540 MEIOBQ8N635 442 aa12.53□□□□□ -0.4
PRKCSH-202ENST00000585540 PHOSPHO1Q8TCT1 267 aa12.53□□□□□ -0.4
PRKCSH-202ENST00000585540 ARSGQ96EG1 525 aa12.53□□□□□ -0.4
PRKCSH-202ENST00000585540 CALHM2Q9HA72 323 aa12.53□□□□□ -0.4
PRKCSH-202ENST00000585540 CHST11Q9NPF2 352 aa12.53□□□□□ -0.4
PRKCSH-202ENST00000585540 SLC52A3Q9NQ40 469 aa12.53□□□□□ -0.4
PRKCSH-202ENST00000585540 EXOSC3Q9NQT5 275 aaKnown RBP12.53□□□□□ -0.4
PRKCSH-202ENST00000585540 SLC6A13Q9NSD5 602 aa12.53□□□□□ -0.4
PRKCSH-202ENST00000585540 FLRT3Q9NZU0 649 aa12.53□□□□□ -0.4
PRKCSH-202ENST00000585540 MYO7BQ6PIF6 2116 aa12.53□□□□□ -0.4
PRKCSH-202ENST00000585540 LRRK2Q5S007 2527 aa12.53□□□□□ -0.4
PRKCSH-202ENST00000585540 C2orf72A6NCS6 295 aa12.52□□□□□ -0.41
PRKCSH-202ENST00000585540 SERINC4A6NH21 518 aa12.52□□□□□ -0.41
PRKCSH-202ENST00000585540 HSPB2A8KAH6 182 aa12.52□□□□□ -0.41
PRKCSH-202ENST00000585540 GTPBP1O00178 669 aaKnown RBP12.52□□□□□ -0.41
PRKCSH-202ENST00000585540 ANGPT2O15123 496 aa12.52□□□□□ -0.41
PRKCSH-202ENST00000585540 ZNF264O43296 627 aa12.52□□□□□ -0.41
PRKCSH-202ENST00000585540 SNX3O60493 162 aa12.52□□□□□ -0.41
PRKCSH-202ENST00000585540 CLDN14O95500 239 aa12.52□□□□□ -0.41
PRKCSH-202ENST00000585540 NPPAP01160 153 aa12.52□□□□□ -0.41
PRKCSH-202ENST00000585540 UBL4AP11441 157 aa12.52□□□□□ -0.41
PRKCSH-202ENST00000585540 ZNF708P17019 499 aa12.52□□□□□ -0.41
PRKCSH-202ENST00000585540 SLC6A8P48029 635 aa12.52□□□□□ -0.41
PRKCSH-202ENST00000585540 DSTNP60981 165 aa12.52□□□□□ -0.41
PRKCSH-202ENST00000585540 RPS3AP61247 264 aaKnown RBP12.52□□□□□ -0.41
PRKCSH-202ENST00000585540 RPS26P62854 115 aaKnown RBP12.52□□□□□ -0.41
PRKCSH-202ENST00000585540 ADORA2A-AS1P86434 159 aa12.52□□□□□ -0.41
PRKCSH-202ENST00000585540 CBFBQ13951 182 aa12.52□□□□□ -0.41
PRKCSH-202ENST00000585540 FGFBP1Q14512 234 aa12.52□□□□□ -0.41
PRKCSH-202ENST00000585540 HSPB2Q16082 182 aa12.52□□□□□ -0.41
PRKCSH-202ENST00000585540 ACSF3Q4G176 576 aaPredicted RBP12.52□□□□□ -0.41
PRKCSH-202ENST00000585540 GPAT3Q53EU6 434 aa12.52□□□□□ -0.41
PRKCSH-202ENST00000585540 NSUN5P2Q63ZY6 315 aa12.52□□□□□ -0.41
PRKCSH-202ENST00000585540 TYW3Q6IPR3 259 aaKnown RBP12.52□□□□□ -0.41
PRKCSH-202ENST00000585540 APOOLQ6UXV4 268 aa12.52□□□□□ -0.41
PRKCSH-202ENST00000585540 EIF3MQ7L2H7 374 aaKnown RBP12.52□□□□□ -0.41
PRKCSH-202ENST00000585540 CPLX4Q7Z7G2 160 aa12.52□□□□□ -0.41
PRKCSH-202ENST00000585540 GTPBP8Q8N3Z3 284 aaPredicted RBP12.52□□□□□ -0.41
PRKCSH-202ENST00000585540 DPP10Q8N608 796 aa12.52□□□□□ -0.41
PRKCSH-202ENST00000585540 WDYHV1Q96HA8 205 aa12.52□□□□□ -0.41
PRKCSH-202ENST00000585540 TTYH2Q9BSA4 534 aa12.52□□□□□ -0.41
PRKCSH-202ENST00000585540 LAT2Q9GZY6 243 aa12.52□□□□□ -0.41
PRKCSH-202ENST00000585540 PAIP1Q9H074 479 aaKnown RBP12.52□□□□□ -0.41
PRKCSH-202ENST00000585540 ARMC7Q9H6L4 198 aa12.52□□□□□ -0.41
PRKCSH-202ENST00000585540 MTHFD2LQ9H903 347 aaPredicted RBP12.52□□□□□ -0.41
PRKCSH-202ENST00000585540 SAR1AQ9NR31 198 aa12.52□□□□□ -0.41
PRKCSH-202ENST00000585540 ST6GALNAC1Q9NSC7 600 aaPredicted RBP12.52□□□□□ -0.41
PRKCSH-202ENST00000585540 MED11Q9P086 117 aa12.52□□□□□ -0.41
PRKCSH-202ENST00000585540 CAMK2AQ9UQM7 478 aa12.52□□□□□ -0.41
PRKCSH-202ENST00000585540 NDUFAF1Q9Y375 327 aa12.52□□□□□ -0.41
PRKCSH-202ENST00000585540 GPC6Q9Y625 555 aaPredicted RBP12.52□□□□□ -0.41
PRKCSH-202ENST00000585540 KCNE3Q9Y6H6 103 aa12.52□□□□□ -0.41
PRKCSH-202ENST00000585540 RELNP78509 3460 aa12.52□□□□□ -0.41
PRKCSH-202ENST00000585540 FREM3P0C091 2139 aa12.52□□□□□ -0.41
PRKCSH-202ENST00000585540 MBD3L4A6NDZ8 208 aaPredicted RBP12.51□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms