RNA–Protein interactions for RNA: ENST00000585042.5

VAPA-209, Transcript of VAMP associated protein A, humanhuman

TSL 4

Gene VAPA, Length 567 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-209ENST00000585042 GIMAP1-GIMAP5A0A087WTJ2 511 aa13.43□□□□□ -0.26
VAPA-209ENST00000585042 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP13.43□□□□□ -0.26
VAPA-209ENST00000585042 SMIM23A6NLE4 172 aa13.43□□□□□ -0.26
VAPA-209ENST00000585042 PLIN3O60664 434 aa13.43□□□□□ -0.26
VAPA-209ENST00000585042 KCNK2O95069 426 aa13.43□□□□□ -0.26
VAPA-209ENST00000585042 NEFHP12036 1026 aa13.43□□□□□ -0.26
VAPA-209ENST00000585042 CPA3P15088 417 aa13.43□□□□□ -0.26
VAPA-209ENST00000585042 HPGDP15428 266 aa13.43□□□□□ -0.26
VAPA-209ENST00000585042 PSMB1P20618 241 aaKnown RBP13.43□□□□□ -0.26
VAPA-209ENST00000585042 EIF1P41567 113 aaKnown RBP13.43□□□□□ -0.26
VAPA-209ENST00000585042 SLC6A8P48029 635 aa13.43□□□□□ -0.26
VAPA-209ENST00000585042 PTH2RP49190 550 aa13.43□□□□□ -0.26
VAPA-209ENST00000585042 ZNF41P51814 821 aaPredicted RBP13.43□□□□□ -0.26
VAPA-209ENST00000585042 SLC18A2Q05940 514 aa13.43□□□□□ -0.26
VAPA-209ENST00000585042 HSPB3Q12988 150 aa13.43□□□□□ -0.26
VAPA-209ENST00000585042 MLC1Q15049 377 aa13.43□□□□□ -0.26
VAPA-209ENST00000585042 EXOC3L2Q2M3D2 409 aa13.43□□□□□ -0.26
VAPA-209ENST00000585042 CTU2Q2VPK5 515 aaKnown RBP13.43□□□□□ -0.26
VAPA-209ENST00000585042 ANKRD34AQ69YU3 496 aa13.43□□□□□ -0.26
VAPA-209ENST00000585042 RIBC1Q8N443 379 aaPredicted RBP13.43□□□□□ -0.26
VAPA-209ENST00000585042 ZNF611Q8N823 705 aa13.43□□□□□ -0.26
VAPA-209ENST00000585042 OR2V1Q8NHB1 315 aa13.43□□□□□ -0.26
VAPA-209ENST00000585042 TMEM171Q8WVE6 324 aa13.43□□□□□ -0.26
VAPA-209ENST00000585042 SLC9A6Q92581 669 aa13.43□□□□□ -0.26
VAPA-209ENST00000585042 PPCDCQ96CD2 204 aa13.43□□□□□ -0.26
VAPA-209ENST00000585042 GIMAP5Q96F15 307 aa13.43□□□□□ -0.26
VAPA-209ENST00000585042 PERPQ96FX8 193 aa13.43□□□□□ -0.26
VAPA-209ENST00000585042 MS4A4EQ96PG1 132 aa13.43□□□□□ -0.26
VAPA-209ENST00000585042 USB1Q9BQ65 265 aaKnown RBP13.43□□□□□ -0.26
VAPA-209ENST00000585042 TMEM204Q9BSN7 226 aa13.43□□□□□ -0.26
VAPA-209ENST00000585042 TRMOQ9BU70 441 aa13.43□□□□□ -0.26
VAPA-209ENST00000585042 CXorf56Q9H5V9 222 aa13.43□□□□□ -0.26
VAPA-209ENST00000585042 GP6Q9HCN6 339 aa13.43□□□□□ -0.26
VAPA-209ENST00000585042 EQTNQ9NQ60 294 aa13.43□□□□□ -0.26
VAPA-209ENST00000585042 TIGARQ9NQ88 270 aa13.43□□□□□ -0.26
VAPA-209ENST00000585042 FN1P02751 2386 aaKnown RBP13.43□□□□□ -0.26
VAPA-209ENST00000585042 HEATR5AQ86XA9 2040 aa13.42□□□□□ -0.26
VAPA-209ENST00000585042 A0A1W2PPM1 405 aa13.42□□□□□ -0.26
VAPA-209ENST00000585042 A0A1W2PRB8 838 aa13.42□□□□□ -0.26
VAPA-209ENST00000585042 CNOT4O95628 575 aaKnown RBP13.42□□□□□ -0.26
VAPA-209ENST00000585042 SHBGP04278 402 aa13.42□□□□□ -0.26
VAPA-209ENST00000585042 ALOX5P09917 674 aa13.42□□□□□ -0.26
VAPA-209ENST00000585042 ADH6P28332 368 aa13.42□□□□□ -0.26
VAPA-209ENST00000585042 ASMTP46597 345 aa13.42□□□□□ -0.26
VAPA-209ENST00000585042 PRKAG1P54619 331 aa13.42□□□□□ -0.26
VAPA-209ENST00000585042 CARD18P57730 90 aa13.42□□□□□ -0.26
VAPA-209ENST00000585042 PDE7AQ13946 482 aa13.42□□□□□ -0.26
VAPA-209ENST00000585042 PLPPR5Q32ZL2 321 aa13.42□□□□□ -0.26
VAPA-209ENST00000585042 LIPMQ5VYY2 423 aa13.42□□□□□ -0.26
VAPA-209ENST00000585042 HBMQ6B0K9 141 aa13.42□□□□□ -0.26
VAPA-209ENST00000585042 ADAM5Q6NVV9 412 aa13.42□□□□□ -0.26
VAPA-209ENST00000585042 LRIG3Q6UXM1 1119 aa13.42□□□□□ -0.26
VAPA-209ENST00000585042 ZNF704Q6ZNC4 412 aaPredicted RBP13.42□□□□□ -0.26
VAPA-209ENST00000585042 Q6ZSR9 355 aa13.42□□□□□ -0.26
VAPA-209ENST00000585042 R3HCC1LQ7Z5L2 792 aaKnown RBP13.42□□□□□ -0.26
VAPA-209ENST00000585042 MTERF4Q7Z6M4 381 aaKnown RBP13.42□□□□□ -0.26
VAPA-209ENST00000585042 SLC16A11Q8NCK7 471 aa13.42□□□□□ -0.26
VAPA-209ENST00000585042 STEAP2Q8NFT2 490 aa13.42□□□□□ -0.26
VAPA-209ENST00000585042 AENQ8WTP8 325 aaKnown RBP13.42□□□□□ -0.26
VAPA-209ENST00000585042 OSTF1Q92882 214 aa13.42□□□□□ -0.26
VAPA-209ENST00000585042 PARD6BQ9BYG5 372 aa13.42□□□□□ -0.26
VAPA-209ENST00000585042 ROPN1BQ9BZX4 212 aaPredicted RBP13.42□□□□□ -0.26
VAPA-209ENST00000585042 ROPN1Q9HAT0 212 aaPredicted RBP13.42□□□□□ -0.26
VAPA-209ENST00000585042 MED17Q9NVC6 651 aa13.42□□□□□ -0.26
VAPA-209ENST00000585042 HIVEP2P31629 2446 aa13.41□□□□□ -0.26
VAPA-209ENST00000585042 A0A0J9YW62 118 aa13.41□□□□□ -0.26
VAPA-209ENST00000585042 TLDC2A0PJX2 215 aa13.41□□□□□ -0.26
VAPA-209ENST00000585042 SHISA8B8ZZ34 492 aa13.41□□□□□ -0.26
VAPA-209ENST00000585042 SCDO00767 359 aa13.41□□□□□ -0.26
VAPA-209ENST00000585042 HS3ST1O14792 307 aa13.41□□□□□ -0.26
VAPA-209ENST00000585042 CXCL13O43927 109 aa13.41□□□□□ -0.26
VAPA-209ENST00000585042 CHEK2O96017 543 aa13.41□□□□□ -0.26
VAPA-209ENST00000585042 NUDT17P0C025 328 aa13.41□□□□□ -0.26
VAPA-209ENST00000585042 ACP2P11117 423 aa13.41□□□□□ -0.26
VAPA-209ENST00000585042 ELK4P28324 431 aa13.41□□□□□ -0.26
VAPA-209ENST00000585042 PRIM2P49643 509 aa13.41□□□□□ -0.26
VAPA-209ENST00000585042 RNPS1Q15287 305 aaKnown RBP13.41□□□□□ -0.26
VAPA-209ENST00000585042 EXOSC6Q5RKV6 272 aaKnown RBP13.41□□□□□ -0.26
VAPA-209ENST00000585042 MFSD12Q6NUT3 480 aa13.41□□□□□ -0.26
VAPA-209ENST00000585042 GALNT10Q86SR1 603 aa13.41□□□□□ -0.26
VAPA-209ENST00000585042 B4GALNT2Q8NHY0 566 aa13.41□□□□□ -0.26
VAPA-209ENST00000585042 CIDECQ96AQ7 238 aaPredicted RBP13.41□□□□□ -0.26
VAPA-209ENST00000585042 REXO5Q96IC2 774 aaKnown RBP13.41□□□□□ -0.26
VAPA-209ENST00000585042 RNF145Q96MT1 663 aa13.41□□□□□ -0.26
VAPA-209ENST00000585042 STACQ99469 402 aa13.41□□□□□ -0.26
VAPA-209ENST00000585042 BTBD2Q9BX70 525 aa13.41□□□□□ -0.26
VAPA-209ENST00000585042 ACTR6Q9GZN1 396 aa13.41□□□□□ -0.26
VAPA-209ENST00000585042 HOXD1Q9GZZ0 328 aa13.41□□□□□ -0.26
VAPA-209ENST00000585042 TNFRSF12AQ9NP84 129 aa13.41□□□□□ -0.26
VAPA-209ENST00000585042 NGBQ9NPG2 151 aa13.41□□□□□ -0.26
VAPA-209ENST00000585042 DUSP22Q9NRW4 184 aa13.41□□□□□ -0.26
VAPA-209ENST00000585042 SH3BP4Q9P0V3 963 aa13.41□□□□□ -0.26
VAPA-209ENST00000585042 MID2Q9UJV3 735 aa13.41□□□□□ -0.26
VAPA-209ENST00000585042 SNX8Q9Y5X2 465 aa13.41□□□□□ -0.26
VAPA-209ENST00000585042 GJE1A6NN92 205 aa13.4□□□□□ -0.26
VAPA-209ENST00000585042 TNFSF11O14788 317 aa13.4□□□□□ -0.26
VAPA-209ENST00000585042 AZIN1O14977 448 aa13.4□□□□□ -0.26
VAPA-209ENST00000585042 GMFGO60234 142 aa13.4□□□□□ -0.26
VAPA-209ENST00000585042 FGF4P08620 206 aa13.4□□□□□ -0.26
VAPA-209ENST00000585042 LINGO3P0C6S8 592 aa13.4□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 50.8 ms