RNA–Protein interactions for RNA: ENST00000584655.5

RFFL-212, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

TSL 2 BASIC

Gene RFFL, Length 4,039 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-212ENST00000584655 CSF2RBP32927 897 aa9.53□□□□□ -0.88
RFFL-212ENST00000584655 GP2P55259 537 aaKnown RBP9.53□□□□□ -0.88
RFFL-212ENST00000584655 ZBED5Q49AG3 693 aa9.53□□□□□ -0.88
RFFL-212ENST00000584655 MED25Q71SY5 747 aa9.53□□□□□ -0.88
RFFL-212ENST00000584655 NAXEQ8NCW5 288 aa9.53□□□□□ -0.88
RFFL-212ENST00000584655 CEP19Q96LK0 163 aa9.53□□□□□ -0.88
RFFL-212ENST00000584655 TNFRSF13CQ96RJ3 184 aa9.53□□□□□ -0.88
RFFL-212ENST00000584655 FAM86C1Q9NVL1 165 aa9.53□□□□□ -0.88
RFFL-212ENST00000584655 TVP23AA6NH52 213 aa9.53□□□□□ -0.88
RFFL-212ENST00000584655 CD8B2A6NJW9 211 aa9.53□□□□□ -0.88
RFFL-212ENST00000584655 EFCAB9A8MZ26 197 aa9.53□□□□□ -0.88
RFFL-212ENST00000584655 DVL2O14641 736 aa9.53□□□□□ -0.88
RFFL-212ENST00000584655 TFECO14948 347 aaPredicted RBP9.53□□□□□ -0.88
RFFL-212ENST00000584655 OIP5O43482 229 aa9.53□□□□□ -0.88
RFFL-212ENST00000584655 STX11O75558 287 aa9.53□□□□□ -0.88
RFFL-212ENST00000584655 EPPINO95925 133 aa9.53□□□□□ -0.88
RFFL-212ENST00000584655 ADRA2AP08913 450 aa9.53□□□□□ -0.88
RFFL-212ENST00000584655 CD8BP10966 210 aa9.53□□□□□ -0.88
RFFL-212ENST00000584655 CCL7P80098 99 aa9.53□□□□□ -0.88
RFFL-212ENST00000584655 PGBD2Q6P3X8 592 aa9.53□□□□□ -0.88
RFFL-212ENST00000584655 OAFQ86UD1 273 aa9.53□□□□□ -0.88
RFFL-212ENST00000584655 PJA1Q8NG27 643 aa9.53□□□□□ -0.88
RFFL-212ENST00000584655 MR1Q95460 341 aa9.53□□□□□ -0.88
RFFL-212ENST00000584655 OR11A1Q9GZK7 315 aa9.53□□□□□ -0.88
RFFL-212ENST00000584655 ARRDC1-AS1Q9H2J1 176 aa9.53□□□□□ -0.88
RFFL-212ENST00000584655 RXFP3Q9NSD7 469 aa9.53□□□□□ -0.88
RFFL-212ENST00000584655 ZNF226Q9NYT6 803 aa9.53□□□□□ -0.88
RFFL-212ENST00000584655 SEC14L4Q9UDX3 406 aa9.53□□□□□ -0.88
RFFL-212ENST00000584655 PILRAQ9UKJ1 303 aa9.53□□□□□ -0.88
RFFL-212ENST00000584655 TMA7Q9Y2S6 64 aaKnown RBP9.53□□□□□ -0.88
RFFL-212ENST00000584655 SH3PXD2BA1X283 911 aa9.53□□□□□ -0.88
RFFL-212ENST00000584655 A6NL46 340 aa9.53□□□□□ -0.88
RFFL-212ENST00000584655 FOXS1O43638 330 aa9.53□□□□□ -0.88
RFFL-212ENST00000584655 WISP1O95388 367 aa9.53□□□□□ -0.88
RFFL-212ENST00000584655 CLEC2LP0C7M8 214 aa9.53□□□□□ -0.88
RFFL-212ENST00000584655 ANXA8P13928 327 aa9.53□□□□□ -0.88
RFFL-212ENST00000584655 CAPZBP47756 277 aa9.53□□□□□ -0.88
RFFL-212ENST00000584655 C14orf28Q4W4Y0 310 aa9.53□□□□□ -0.88
RFFL-212ENST00000584655 C6orf183Q5T699 404 aa9.53□□□□□ -0.88
RFFL-212ENST00000584655 ARL9Q6T311 187 aa9.53□□□□□ -0.88
RFFL-212ENST00000584655 IKBIPQ70UQ0 350 aa9.53□□□□□ -0.88
RFFL-212ENST00000584655 OR8H2Q8N162 312 aa9.53□□□□□ -0.88
RFFL-212ENST00000584655 PAPD5Q8NDF8 572 aaKnown RBP9.53□□□□□ -0.88
RFFL-212ENST00000584655 ZNF675Q8TD23 568 aa9.53□□□□□ -0.88
RFFL-212ENST00000584655 MS4A4EQ96PG1 132 aa9.53□□□□□ -0.88
RFFL-212ENST00000584655 SAP130Q9H0E3 1048 aa9.53□□□□□ -0.88
RFFL-212ENST00000584655 A4GNTQ9UNA3 340 aa9.53□□□□□ -0.88
RFFL-212ENST00000584655 GRIP1Q9Y3R0 1128 aa9.53□□□□□ -0.88
RFFL-212ENST00000584655 TP53BP1Q12888 1972 aaPredicted RBP9.53□□□□□ -0.88
RFFL-212ENST00000584655 A6NCN8 305 aa9.53□□□□□ -0.88
RFFL-212ENST00000584655 TBX1O43435 398 aa9.53□□□□□ -0.88
RFFL-212ENST00000584655 HCN1O60741 890 aa9.53□□□□□ -0.88
RFFL-212ENST00000584655 RECKO95980 971 aa9.53□□□□□ -0.88
RFFL-212ENST00000584655 TSPAN19P0C672 248 aa9.53□□□□□ -0.88
RFFL-212ENST00000584655 PAICSP22234 425 aaKnown RBP9.53□□□□□ -0.88
RFFL-212ENST00000584655 PRPH2P23942 346 aa9.53□□□□□ -0.88
RFFL-212ENST00000584655 CSTF2P33240 577 aaKnown RBP eCLIP9.53□□□□□ -0.88
RFFL-212ENST00000584655 PCYT1AP49585 367 aa9.53□□□□□ -0.88
RFFL-212ENST00000584655 RAB25P57735 213 aa9.53□□□□□ -0.88
RFFL-212ENST00000584655 ERVK-25P63136 954 aa9.53□□□□□ -0.88
RFFL-212ENST00000584655 FOXK1P85037 733 aa9.53□□□□□ -0.88
RFFL-212ENST00000584655 CFHR1Q03591 330 aa9.53□□□□□ -0.88
RFFL-212ENST00000584655 DMPKQ09013 629 aa9.53□□□□□ -0.88
RFFL-212ENST00000584655 OR1Q1Q15612 314 aa9.53□□□□□ -0.88
RFFL-212ENST00000584655 C22orf42Q6IC83 251 aa9.53□□□□□ -0.88
RFFL-212ENST00000584655 PLXDC2Q6UX71 529 aa9.53□□□□□ -0.88
RFFL-212ENST00000584655 FRRS1Q6ZNA5 592 aa9.53□□□□□ -0.88
RFFL-212ENST00000584655 UBQLNLQ8IYU4 475 aa9.53□□□□□ -0.88
RFFL-212ENST00000584655 PIGXQ8TBF5 258 aa9.53□□□□□ -0.88
RFFL-212ENST00000584655 RHBDD1Q8TEB9 315 aa9.53□□□□□ -0.88
RFFL-212ENST00000584655 DACT3Q96B18 629 aaPredicted RBP9.53□□□□□ -0.88
RFFL-212ENST00000584655 ZDHHC12Q96GR4 267 aa9.53□□□□□ -0.88
RFFL-212ENST00000584655 ZNF578Q96N58 590 aaPredicted RBP9.53□□□□□ -0.88
RFFL-212ENST00000584655 SPATA5L1Q9BVQ7 753 aa9.53□□□□□ -0.88
RFFL-212ENST00000584655 OCIAD1Q9NX40 245 aa9.53□□□□□ -0.88
RFFL-212ENST00000584655 MYEF2Q9P2K5 600 aaKnown RBP9.53□□□□□ -0.88
RFFL-212ENST00000584655 ZNF443Q9Y2A4 671 aaPredicted RBP9.53□□□□□ -0.88
RFFL-212ENST00000584655 EIF1AYO14602 144 aaKnown RBP9.52□□□□□ -0.89
RFFL-212ENST00000584655 DUX1O43812 170 aa9.52□□□□□ -0.89
RFFL-212ENST00000584655 IGKV1D-16P01601 117 aa9.52□□□□□ -0.89
RFFL-212ENST00000584655 NME1P15531 152 aaKnown RBP9.52□□□□□ -0.89
RFFL-212ENST00000584655 PYCR1P32322 319 aa9.52□□□□□ -0.89
RFFL-212ENST00000584655 GRK5P34947 590 aa9.52□□□□□ -0.89
RFFL-212ENST00000584655 PSMB10P40306 273 aa9.52□□□□□ -0.89
RFFL-212ENST00000584655 TOMM34Q15785 309 aaPredicted RBP9.52□□□□□ -0.89
RFFL-212ENST00000584655 FAM27D1Q5T7N8 215 aa9.52□□□□□ -0.89
RFFL-212ENST00000584655 WDR88Q6ZMY6 472 aa9.52□□□□□ -0.89
RFFL-212ENST00000584655 GDF7Q7Z4P5 450 aa9.52□□□□□ -0.89
RFFL-212ENST00000584655 PACRGLQ8N7B6 248 aa9.52□□□□□ -0.89
RFFL-212ENST00000584655 C10orf90Q96M02 699 aa9.52□□□□□ -0.89
RFFL-212ENST00000584655 ZNF681Q96N22 645 aa9.52□□□□□ -0.89
RFFL-212ENST00000584655 ERMAPQ96PL5 475 aaPredicted RBP9.52□□□□□ -0.89
RFFL-212ENST00000584655 OR10A5Q9H207 317 aa9.52□□□□□ -0.89
RFFL-212ENST00000584655 POMT2Q9UKY4 750 aa9.52□□□□□ -0.89
RFFL-212ENST00000584655 ERGIC3Q9Y282 383 aa9.52□□□□□ -0.89
RFFL-212ENST00000584655 POFUT2Q9Y2G5 429 aa9.52□□□□□ -0.89
RFFL-212ENST00000584655 CORINQ9Y5Q5 1042 aa9.52□□□□□ -0.89
RFFL-212ENST00000584655 HS3ST3A1Q9Y663 406 aa9.52□□□□□ -0.89
RFFL-212ENST00000584655 CACNA1AO00555 2505 aa9.52□□□□□ -0.89
RFFL-212ENST00000584655 PHF3Q92576 2039 aaKnown RBP9.52□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms