RNA–Protein interactions for RNA: ENST00000583775.1

PRKCA-205, Transcript of protein kinase C alpha, humanhuman

TSL 3

Gene PRKCA, Length 321 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCA-205ENST00000583775 HMGB4Q8WW32 186 aa5.71□□□□□ -1.5
PRKCA-205ENST00000583775 TANKQ92844 425 aa5.71□□□□□ -1.5
PRKCA-205ENST00000583775 C12orf43Q96C57 262 aaKnown RBP5.71□□□□□ -1.5
PRKCA-205ENST00000583775 DTNBP1Q96EV8 351 aa5.71□□□□□ -1.5
PRKCA-205ENST00000583775 GIMAP5Q96F15 307 aa5.71□□□□□ -1.5
PRKCA-205ENST00000583775 COG8Q96MW5 612 aa5.71□□□□□ -1.5
PRKCA-205ENST00000583775 ZNF285Q96NJ3 590 aa5.71□□□□□ -1.5
PRKCA-205ENST00000583775 NELL2Q99435 816 aa5.71□□□□□ -1.5
PRKCA-205ENST00000583775 ACTRT3Q9BYD9 372 aa5.71□□□□□ -1.5
PRKCA-205ENST00000583775 POLR2J2Q9GZM3 115 aaKnown RBP5.71□□□□□ -1.5
PRKCA-205ENST00000583775 LHPPQ9H008 270 aa5.71□□□□□ -1.5
PRKCA-205ENST00000583775 RAB33BQ9H082 229 aa5.71□□□□□ -1.5
PRKCA-205ENST00000583775 POLR2J3Q9H1A7 115 aaKnown RBP5.71□□□□□ -1.5
PRKCA-205ENST00000583775 SLC6A15Q9H2J7 730 aa5.71□□□□□ -1.5
PRKCA-205ENST00000583775 TTYH1Q9H313 450 aaPredicted RBP5.71□□□□□ -1.5
PRKCA-205ENST00000583775 RIBC2Q9H4K1 309 aa5.71□□□□□ -1.5
PRKCA-205ENST00000583775 C6orf106Q9H6K1 298 aaPredicted RBP5.71□□□□□ -1.5
PRKCA-205ENST00000583775 NMNAT1Q9HAN9 279 aaPredicted RBP5.71□□□□□ -1.5
PRKCA-205ENST00000583775 FANCEQ9HB96 536 aa5.71□□□□□ -1.5
PRKCA-205ENST00000583775 LTB4R2Q9NPC1 389 aa5.71□□□□□ -1.5
PRKCA-205ENST00000583775 CD93Q9NPY3 652 aa5.71□□□□□ -1.5
PRKCA-205ENST00000583775 POLE3Q9NRF9 147 aa5.71□□□□□ -1.5
PRKCA-205ENST00000583775 CNOT2Q9NZN8 540 aaKnown RBP5.71□□□□□ -1.5
PRKCA-205ENST00000583775 SEC14L3Q9UDX4 400 aa5.71□□□□□ -1.5
PRKCA-205ENST00000583775 PSORS1C1Q9UIG5 152 aa5.71□□□□□ -1.5
PRKCA-205ENST00000583775 POMT2Q9UKY4 750 aa5.71□□□□□ -1.5
PRKCA-205ENST00000583775 TMCC3Q9ULS5 477 aa5.71□□□□□ -1.5
PRKCA-205ENST00000583775 DAPP1Q9UN19 280 aa5.71□□□□□ -1.5
PRKCA-205ENST00000583775 CDC14AQ9UNH5 594 aa5.71□□□□□ -1.5
PRKCA-205ENST00000583775 SATB2Q9UPW6 733 aa5.71□□□□□ -1.5
PRKCA-205ENST00000583775 SLC9A8Q9Y2E8 581 aa5.71□□□□□ -1.5
PRKCA-205ENST00000583775 MRPS17Q9Y2R5 130 aaKnown RBP5.71□□□□□ -1.5
PRKCA-205ENST00000583775 SH3GLB1Q9Y371 365 aa5.71□□□□□ -1.5
PRKCA-205ENST00000583775 TESMINQ9Y4I5 508 aa5.71□□□□□ -1.5
PRKCA-205ENST00000583775 TDRD6O60522 2096 aaKnown RBP5.71□□□□□ -1.5
PRKCA-205ENST00000583775 THADAQ6YHU6 1953 aa5.71□□□□□ -1.5
PRKCA-205ENST00000583775 IGHV1OR15-9A0A0B4J2B8 117 aa5.7□□□□□ -1.5
PRKCA-205ENST00000583775 A0A1W2PR77 199 aa5.7□□□□□ -1.5
PRKCA-205ENST00000583775 A0A1W2PRX2 142 aa5.7□□□□□ -1.5
PRKCA-205ENST00000583775 SH3PXD2BA1X283 911 aa5.7□□□□□ -1.5
PRKCA-205ENST00000583775 OR5K3A6NET4 321 aa5.7□□□□□ -1.5
PRKCA-205ENST00000583775 LILRA5A6NI73 299 aa5.7□□□□□ -1.5
PRKCA-205ENST00000583775 WASHC1A8K0Z3 465 aa5.7□□□□□ -1.5
PRKCA-205ENST00000583775 CLCA1A8K7I4 914 aa5.7□□□□□ -1.5
PRKCA-205ENST00000583775 ZNF99A8MXY4 864 aaPredicted RBP5.7□□□□□ -1.5
PRKCA-205ENST00000583775 H0YGG7 62 aa5.7□□□□□ -1.5
PRKCA-205ENST00000583775 PCDH17O14917 1159 aa5.7□□□□□ -1.5
PRKCA-205ENST00000583775 RGS10O43665 173 aa5.7□□□□□ -1.5
PRKCA-205ENST00000583775 SRPX2O60687 465 aaPredicted RBP5.7□□□□□ -1.5
PRKCA-205ENST00000583775 NOL3O60936 208 aaKnown RBP5.7□□□□□ -1.5
PRKCA-205ENST00000583775 GABARAPO95166 117 aa5.7□□□□□ -1.5
PRKCA-205ENST00000583775 AK1P00568 194 aa5.7□□□□□ -1.5
PRKCA-205ENST00000583775 CSF2P04141 144 aa5.7□□□□□ -1.5
PRKCA-205ENST00000583775 CHRM4P08173 479 aa5.7□□□□□ -1.5
PRKCA-205ENST00000583775 THEGLP0DJG4 465 aa5.7□□□□□ -1.5
PRKCA-205ENST00000583775 OR12D1P0DN82 309 aa5.7□□□□□ -1.5
PRKCA-205ENST00000583775 CDK4P11802 303 aa5.7□□□□□ -1.5
PRKCA-205ENST00000583775 PIPP12273 146 aaPredicted RBP5.7□□□□□ -1.5
PRKCA-205ENST00000583775 POLR2CP19387 275 aaPredicted RBP5.7□□□□□ -1.5
PRKCA-205ENST00000583775 CCNA2P20248 432 aa5.7□□□□□ -1.5
PRKCA-205ENST00000583775 ELAVL4P26378 380 aaKnown RBP5.7□□□□□ -1.5
PRKCA-205ENST00000583775 CD27P26842 260 aa5.7□□□□□ -1.5
PRKCA-205ENST00000583775 CRISP1P54107 249 aa5.7□□□□□ -1.5
PRKCA-205ENST00000583775 PER3P56645 1201 aa5.7□□□□□ -1.5
PRKCA-205ENST00000583775 STARD6P59095 220 aa5.7□□□□□ -1.5
PRKCA-205ENST00000583775 RAB8AP61006 207 aa5.7□□□□□ -1.5
PRKCA-205ENST00000583775 ARF3P61204 181 aaPredicted RBP5.7□□□□□ -1.5
PRKCA-205ENST00000583775 ADAM8P78325 824 aa5.7□□□□□ -1.5
PRKCA-205ENST00000583775 DUSP2Q05923 314 aa5.7□□□□□ -1.5
PRKCA-205ENST00000583775 FUT5Q11128 374 aa5.7□□□□□ -1.5
PRKCA-205ENST00000583775 RUNX2Q13950 521 aa5.7□□□□□ -1.5
PRKCA-205ENST00000583775 TBCEQ15813 527 aaPredicted RBP5.7□□□□□ -1.5
PRKCA-205ENST00000583775 NPTX1Q15818 432 aa5.7□□□□□ -1.5
PRKCA-205ENST00000583775 NEDD8Q15843 81 aa5.7□□□□□ -1.5
PRKCA-205ENST00000583775 SYPL1Q16563 259 aa5.7□□□□□ -1.5
PRKCA-205ENST00000583775 PRTGQ2VWP7 1150 aa5.7□□□□□ -1.5
PRKCA-205ENST00000583775 ARHGAP11BQ3KRB8 267 aa5.7□□□□□ -1.5
PRKCA-205ENST00000583775 ENTPD8Q5MY95 495 aa5.7□□□□□ -1.5
PRKCA-205ENST00000583775 DCST1Q5T197 706 aa5.7□□□□□ -1.5
PRKCA-205ENST00000583775 ATAD3BQ5T9A4 648 aa5.7□□□□□ -1.5
PRKCA-205ENST00000583775 GPR107Q5VW38 600 aa5.7□□□□□ -1.5
PRKCA-205ENST00000583775 SLX4IPQ5VYV7 408 aa5.7□□□□□ -1.5
PRKCA-205ENST00000583775 RNLSQ5VYX0 342 aa5.7□□□□□ -1.5
PRKCA-205ENST00000583775 C12orf73Q69YU5 71 aa5.7□□□□□ -1.5
PRKCA-205ENST00000583775 LAIR1Q6GTX8 287 aa5.7□□□□□ -1.5
PRKCA-205ENST00000583775 MFSD12Q6NUT3 480 aa5.7□□□□□ -1.5
PRKCA-205ENST00000583775 KLHL35Q6PF15 583 aa5.7□□□□□ -1.5
PRKCA-205ENST00000583775 SLC16A12Q6ZSM3 486 aa5.7□□□□□ -1.5
PRKCA-205ENST00000583775 RD3Q7Z3Z2 195 aa5.7□□□□□ -1.5
PRKCA-205ENST00000583775 MRGPREQ86SM8 312 aa5.7□□□□□ -1.5
PRKCA-205ENST00000583775 ADGRE4PQ86SQ3 457 aa5.7□□□□□ -1.5
PRKCA-205ENST00000583775 PARGQ86W56 976 aa5.7□□□□□ -1.5
PRKCA-205ENST00000583775 OOSP2Q86WS3 158 aa5.7□□□□□ -1.5
PRKCA-205ENST00000583775 SMYD1Q8NB12 490 aa5.7□□□□□ -1.5
PRKCA-205ENST00000583775 BPIFB6Q8NFQ5 453 aa5.7□□□□□ -1.5
PRKCA-205ENST00000583775 C9orf43Q8TAL5 461 aaPredicted RBP5.7□□□□□ -1.5
PRKCA-205ENST00000583775 CNIH3Q8TBE1 160 aa5.7□□□□□ -1.5
PRKCA-205ENST00000583775 ADAMTS18Q8TE60 1221 aa5.7□□□□□ -1.5
PRKCA-205ENST00000583775 SLC37A2Q8TED4 501 aa5.7□□□□□ -1.5
PRKCA-205ENST00000583775 SNX33Q8WV41 574 aa5.7□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms