RNA–Protein interactions for RNA: ENST00000582955.5

SMARCE1-218, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 5

Gene SMARCE1, Length 621 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-218ENST00000582955 OLIG3Q7RTU3 272 aa11.42□□□□□ -0.58
SMARCE1-218ENST00000582955 CHDHQ8NE62 594 aaPredicted RBP11.42□□□□□ -0.58
SMARCE1-218ENST00000582955 OR5M1Q8NGP8 315 aa11.42□□□□□ -0.58
SMARCE1-218ENST00000582955 ITCHQ96J02 903 aa11.42□□□□□ -0.58
SMARCE1-218ENST00000582955 VDAC3Q9Y277 283 aa11.42□□□□□ -0.58
SMARCE1-218ENST00000582955 PHF3Q92576 2039 aaKnown RBP11.42□□□□□ -0.58
SMARCE1-218ENST00000582955 MED12Q93074 2177 aa11.41□□□□□ -0.58
SMARCE1-218ENST00000582955 A0A0G2JNJ9 132 aa11.41□□□□□ -0.58
SMARCE1-218ENST00000582955 KDM4EB2RXH2 506 aaPredicted RBP11.41□□□□□ -0.58
SMARCE1-218ENST00000582955 SHISA8B8ZZ34 492 aa11.41□□□□□ -0.58
SMARCE1-218ENST00000582955 H3BML4 177 aa11.41□□□□□ -0.58
SMARCE1-218ENST00000582955 GTPBP1O00178 669 aaKnown RBP11.41□□□□□ -0.58
SMARCE1-218ENST00000582955 NR5A2O00482 541 aa11.41□□□□□ -0.58
SMARCE1-218ENST00000582955 KRT75O95678 551 aa11.41□□□□□ -0.58
SMARCE1-218ENST00000582955 NUDT14O95848 222 aa11.41□□□□□ -0.58
SMARCE1-218ENST00000582955 EPPINO95925 133 aa11.41□□□□□ -0.58
SMARCE1-218ENST00000582955 CPN1P15169 458 aa11.41□□□□□ -0.58
SMARCE1-218ENST00000582955 NCF2P19878 526 aaPredicted RBP11.41□□□□□ -0.58
SMARCE1-218ENST00000582955 POU3F2P20265 443 aaPredicted RBP11.41□□□□□ -0.58
SMARCE1-218ENST00000582955 ADH7P40394 386 aa11.41□□□□□ -0.58
SMARCE1-218ENST00000582955 LHX2P50458 406 aa11.41□□□□□ -0.58
SMARCE1-218ENST00000582955 ZNF41P51814 821 aaPredicted RBP11.41□□□□□ -0.58
SMARCE1-218ENST00000582955 B3GALT5-AS1P59052 145 aa11.41□□□□□ -0.58
SMARCE1-218ENST00000582955 HPCAP84074 193 aa11.41□□□□□ -0.58
SMARCE1-218ENST00000582955 SQLEQ14534 574 aa11.41□□□□□ -0.58
SMARCE1-218ENST00000582955 GPAT3Q53EU6 434 aa11.41□□□□□ -0.58
SMARCE1-218ENST00000582955 KLHL26Q53HC5 615 aa11.41□□□□□ -0.58
SMARCE1-218ENST00000582955 DDX59Q5T1V6 619 aaKnown RBP eCLIP11.41□□□□□ -0.58
SMARCE1-218ENST00000582955 RIPPLY2Q5TAB7 128 aa11.41□□□□□ -0.58
SMARCE1-218ENST00000582955 SP5Q6BEB4 398 aaPredicted RBP11.41□□□□□ -0.58
SMARCE1-218ENST00000582955 ZNF787Q6DD87 383 aa11.41□□□□□ -0.58
SMARCE1-218ENST00000582955 HEPHL1Q6MZM0 1159 aa11.41□□□□□ -0.58
SMARCE1-218ENST00000582955 ARSKQ6UWY0 536 aa11.41□□□□□ -0.58
SMARCE1-218ENST00000582955 MTERF4Q7Z6M4 381 aaKnown RBP11.41□□□□□ -0.58
SMARCE1-218ENST00000582955 LACC1Q8IV20 430 aa11.41□□□□□ -0.58
SMARCE1-218ENST00000582955 UBQLNLQ8IYU4 475 aa11.41□□□□□ -0.58
SMARCE1-218ENST00000582955 B4GALNT2Q8NHY0 566 aa11.41□□□□□ -0.58
SMARCE1-218ENST00000582955 RFWD2Q8NHY2 731 aa11.41□□□□□ -0.58
SMARCE1-218ENST00000582955 ROPN1LQ96C74 230 aa11.41□□□□□ -0.58
SMARCE1-218ENST00000582955 TUBA1CQ9BQE3 449 aa11.41□□□□□ -0.58
SMARCE1-218ENST00000582955 PIGQQ9BRB3 760 aa11.41□□□□□ -0.58
SMARCE1-218ENST00000582955 MED4Q9NPJ6 270 aa11.41□□□□□ -0.58
SMARCE1-218ENST00000582955 CCDC167Q9P0B6 97 aa11.41□□□□□ -0.58
SMARCE1-218ENST00000582955 Q9UFV3 132 aa11.41□□□□□ -0.58
SMARCE1-218ENST00000582955 MKLN1Q9UL63 735 aa11.41□□□□□ -0.58
SMARCE1-218ENST00000582955 WDR45Q9Y484 360 aa11.41□□□□□ -0.58
SMARCE1-218ENST00000582955 DTNAQ9Y4J8 743 aa11.41□□□□□ -0.58
SMARCE1-218ENST00000582955 A0A0G2JND7 137 aa11.4□□□□□ -0.58
SMARCE1-218ENST00000582955 OR2M5A3KFT3 312 aa11.4□□□□□ -0.58
SMARCE1-218ENST00000582955 NPIPB9F8W1W9 429 aa11.4□□□□□ -0.58
SMARCE1-218ENST00000582955 HMGN4O00479 90 aa11.4□□□□□ -0.58
SMARCE1-218ENST00000582955 SEC14L5O43304 696 aa11.4□□□□□ -0.58
SMARCE1-218ENST00000582955 FCMRO60667 390 aa11.4□□□□□ -0.58
SMARCE1-218ENST00000582955 TNFRSF21O75509 655 aa11.4□□□□□ -0.58
SMARCE1-218ENST00000582955 PEPDP12955 493 aa11.4□□□□□ -0.58
SMARCE1-218ENST00000582955 ZNF708P17019 499 aa11.4□□□□□ -0.58
SMARCE1-218ENST00000582955 MRPL19P49406 292 aaKnown RBP11.4□□□□□ -0.58
SMARCE1-218ENST00000582955 ATP4BP51164 291 aa11.4□□□□□ -0.58
SMARCE1-218ENST00000582955 ZNF117Q03924 483 aa11.4□□□□□ -0.58
SMARCE1-218ENST00000582955 NDUFAF6Q330K2 333 aa11.4□□□□□ -0.58
SMARCE1-218ENST00000582955 GTDC1Q4AE62 458 aa11.4□□□□□ -0.58
SMARCE1-218ENST00000582955 AGKQ53H12 422 aa11.4□□□□□ -0.58
SMARCE1-218ENST00000582955 COX20Q5RI15 118 aa11.4□□□□□ -0.58
SMARCE1-218ENST00000582955 PDZK1Q5T2W1 519 aa11.4□□□□□ -0.58
SMARCE1-218ENST00000582955 NSUN5P2Q63ZY6 315 aa11.4□□□□□ -0.58
SMARCE1-218ENST00000582955 SLC2A7Q6PXP3 512 aa11.4□□□□□ -0.58
SMARCE1-218ENST00000582955 SEM1Q6ZVN7 128 aa11.4□□□□□ -0.58
SMARCE1-218ENST00000582955 CHMP1BQ7LBR1 199 aa11.4□□□□□ -0.58
SMARCE1-218ENST00000582955 MEIOBQ8N635 442 aa11.4□□□□□ -0.58
SMARCE1-218ENST00000582955 TMCO5AQ8N6Q1 288 aa11.4□□□□□ -0.58
SMARCE1-218ENST00000582955 ZPLD1Q8TCW7 415 aa11.4□□□□□ -0.58
SMARCE1-218ENST00000582955 ZFP90Q8TF47 636 aa11.4□□□□□ -0.58
SMARCE1-218ENST00000582955 SMPDL3BQ92485 455 aa11.4□□□□□ -0.58
SMARCE1-218ENST00000582955 SPDL1Q96EA4 605 aa11.4□□□□□ -0.58
SMARCE1-218ENST00000582955 SIKE1Q9BRV8 207 aa11.4□□□□□ -0.58
SMARCE1-218ENST00000582955 UCK2Q9BZX2 261 aa11.4□□□□□ -0.58
SMARCE1-218ENST00000582955 NMUR2Q9GZQ4 415 aa11.4□□□□□ -0.58
SMARCE1-218ENST00000582955 ZNF350Q9GZX5 532 aa11.4□□□□□ -0.58
SMARCE1-218ENST00000582955 CHST11Q9NPF2 352 aa11.4□□□□□ -0.58
SMARCE1-218ENST00000582955 SLC6A13Q9NSD5 602 aa11.4□□□□□ -0.58
SMARCE1-218ENST00000582955 MED17Q9NVC6 651 aa11.4□□□□□ -0.58
SMARCE1-218ENST00000582955 TRIM33Q9UPN9 1127 aa11.4□□□□□ -0.58
SMARCE1-218ENST00000582955 CARD8Q9Y2G2 431 aa11.4□□□□□ -0.58
SMARCE1-218ENST00000582955 ZNF337Q9Y3M9 751 aa11.4□□□□□ -0.58
SMARCE1-218ENST00000582955 A0A087WZY1 265 aa11.39□□□□□ -0.59
SMARCE1-218ENST00000582955 CENPVL1A0A0U1RR11 272 aa11.39□□□□□ -0.59
SMARCE1-218ENST00000582955 NKX2-6A6NCS4 301 aa11.39□□□□□ -0.59
SMARCE1-218ENST00000582955 SERINC4A6NH21 518 aa11.39□□□□□ -0.59
SMARCE1-218ENST00000582955 CD8B2A6NJW9 211 aa11.39□□□□□ -0.59
SMARCE1-218ENST00000582955 CLCA1A8K7I4 914 aa11.39□□□□□ -0.59
SMARCE1-218ENST00000582955 HSPB2A8KAH6 182 aa11.39□□□□□ -0.59
SMARCE1-218ENST00000582955 LINC01387J3KSC0 135 aa11.39□□□□□ -0.59
SMARCE1-218ENST00000582955 OIP5O43482 229 aa11.39□□□□□ -0.59
SMARCE1-218ENST00000582955 KIAA0513O60268 411 aa11.39□□□□□ -0.59
SMARCE1-218ENST00000582955 UGT2B17O75795 530 aa11.39□□□□□ -0.59
SMARCE1-218ENST00000582955 CYP7B1O75881 506 aa11.39□□□□□ -0.59
SMARCE1-218ENST00000582955 IL2RAP01589 272 aa11.39□□□□□ -0.59
SMARCE1-218ENST00000582955 VIMP08670 466 aaKnown RBP11.39□□□□□ -0.59
SMARCE1-218ENST00000582955 ZCCHC18P0CG32 403 aa11.39□□□□□ -0.59
SMARCE1-218ENST00000582955 TROVE2P10155 538 aaKnown RBP eCLIP11.39□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms