RNA–Protein interactions for RNA: ENST00000582792.5

SS18-222, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 5

Gene SS18, Length 531 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-222ENST00000582792 COQ9O75208 318 aa12.15□□□□□ -0.46
SS18-222ENST00000582792 RSL1D1O76021 490 aaKnown RBP12.15□□□□□ -0.46
SS18-222ENST00000582792 HSPA4LO95757 839 aa12.15□□□□□ -0.46
SS18-222ENST00000582792 IL11P20809 199 aa12.15□□□□□ -0.46
SS18-222ENST00000582792 ARRB2P32121 409 aa12.15□□□□□ -0.46
SS18-222ENST00000582792 MPIP34949 423 aa12.15□□□□□ -0.46
SS18-222ENST00000582792 SLC6A8P48029 635 aa12.15□□□□□ -0.46
SS18-222ENST00000582792 HTR6P50406 440 aa12.15□□□□□ -0.46
SS18-222ENST00000582792 RAE1P78406 368 aaKnown RBP12.15□□□□□ -0.46
SS18-222ENST00000582792 BST1Q10588 318 aa12.15□□□□□ -0.46
SS18-222ENST00000582792 ZNF155Q12901 538 aaPredicted RBP12.15□□□□□ -0.46
SS18-222ENST00000582792 HEPACAMQ14CZ8 416 aa12.15□□□□□ -0.46
SS18-222ENST00000582792 SGCBQ16585 318 aa12.15□□□□□ -0.46
SS18-222ENST00000582792 SPIN4Q56A73 249 aa12.15□□□□□ -0.46
SS18-222ENST00000582792 TCHHL1Q5QJ38 904 aaPredicted RBP12.15□□□□□ -0.46
SS18-222ENST00000582792 SH2D4BQ5SQS7 431 aa12.15□□□□□ -0.46
SS18-222ENST00000582792 GGNQ86UU5 652 aa12.15□□□□□ -0.46
SS18-222ENST00000582792 ARFGAP2Q8N6H7 521 aa12.15□□□□□ -0.46
SS18-222ENST00000582792 DUSP19Q8WTR2 217 aa12.15□□□□□ -0.46
SS18-222ENST00000582792 PLPPR2Q96GM1 343 aa12.15□□□□□ -0.46
SS18-222ENST00000582792 GMPPAQ96IJ6 420 aaPredicted RBP12.15□□□□□ -0.46
SS18-222ENST00000582792 KCNA7Q96RP8 456 aa12.15□□□□□ -0.46
SS18-222ENST00000582792 ACPTQ9BZG2 426 aa12.15□□□□□ -0.46
SS18-222ENST00000582792 INTS9Q9NV88 658 aaKnown RBP12.15□□□□□ -0.46
SS18-222ENST00000582792 FAM120CQ9NX05 1096 aaKnown RBP12.15□□□□□ -0.46
SS18-222ENST00000582792 FLRT3Q9NZU0 649 aa12.15□□□□□ -0.46
SS18-222ENST00000582792 ZDHHC2Q9UIJ5 367 aa12.15□□□□□ -0.46
SS18-222ENST00000582792 DNAJC15Q9Y5T4 150 aa12.15□□□□□ -0.46
SS18-222ENST00000582792 CUBNO60494 3623 aa12.15□□□□□ -0.47
SS18-222ENST00000582792 GNG14A0A1W2PPG7 69 aa12.14□□□□□ -0.47
SS18-222ENST00000582792 RNF223E7ERA6 249 aa12.14□□□□□ -0.47
SS18-222ENST00000582792 RGS14O43566 566 aa12.14□□□□□ -0.47
SS18-222ENST00000582792 SS18L1O75177 396 aaPredicted RBP12.14□□□□□ -0.47
SS18-222ENST00000582792 PLGP00747 810 aaPredicted RBP12.14□□□□□ -0.47
SS18-222ENST00000582792 CHN1P15882 459 aa12.14□□□□□ -0.47
SS18-222ENST00000582792 GSTM5P46439 218 aa12.14□□□□□ -0.47
SS18-222ENST00000582792 CLK3P49761 638 aaKnown RBP12.14□□□□□ -0.47
SS18-222ENST00000582792 RPL14P50914 215 aaKnown RBP12.14□□□□□ -0.47
SS18-222ENST00000582792 CTBP2P56545 445 aa12.14□□□□□ -0.47
SS18-222ENST00000582792 RPS4XP62701 263 aaKnown RBP12.14□□□□□ -0.47
SS18-222ENST00000582792 VEZF1Q14119 521 aa12.14□□□□□ -0.47
SS18-222ENST00000582792 ETFDHQ16134 617 aa12.14□□□□□ -0.47
SS18-222ENST00000582792 CPEB4Q17RY0 729 aaKnown RBP eCLIP12.14□□□□□ -0.47
SS18-222ENST00000582792 CLEC12BQ2HXU8 276 aa12.14□□□□□ -0.47
SS18-222ENST00000582792 TMEM44Q2T9K0 475 aa12.14□□□□□ -0.47
SS18-222ENST00000582792 CLEC6AQ6EIG7 209 aa12.14□□□□□ -0.47
SS18-222ENST00000582792 GALNT18Q6P9A2 607 aa12.14□□□□□ -0.47
SS18-222ENST00000582792 MARCH3Q86UD3 253 aa12.14□□□□□ -0.47
SS18-222ENST00000582792 MAPK1IP1LQ8NDC0 245 aa12.14□□□□□ -0.47
SS18-222ENST00000582792 C16orf78Q8WTQ4 265 aa12.14□□□□□ -0.47
SS18-222ENST00000582792 ZNF75CPQ92670 426 aaPredicted RBP12.14□□□□□ -0.47
SS18-222ENST00000582792 C11orf24Q96F05 449 aaPredicted RBP12.14□□□□□ -0.47
SS18-222ENST00000582792 SORT1Q99523 831 aa12.14□□□□□ -0.47
SS18-222ENST00000582792 PRRG4Q9BZD6 226 aa12.14□□□□□ -0.47
SS18-222ENST00000582792 SHCBP1LQ9BZQ2 653 aa12.14□□□□□ -0.47
SS18-222ENST00000582792 ACTR6Q9GZN1 396 aa12.14□□□□□ -0.47
SS18-222ENST00000582792 OR10A4Q9H209 315 aa12.14□□□□□ -0.47
SS18-222ENST00000582792 FANCFQ9NPI8 374 aa12.14□□□□□ -0.47
SS18-222ENST00000582792 CLEC4AQ9UMR7 237 aa12.14□□□□□ -0.47
SS18-222ENST00000582792 WBP11Q9Y2W2 641 aaKnown RBP12.14□□□□□ -0.47
SS18-222ENST00000582792 CCL27Q9Y4X3 112 aa12.14□□□□□ -0.47
SS18-222ENST00000582792 A0A087WV62 115 aa12.13□□□□□ -0.47
SS18-222ENST00000582792 IGLV3-32A0A0A0MS00 114 aa12.13□□□□□ -0.47
SS18-222ENST00000582792 RNF212BA8MTL3 300 aa12.13□□□□□ -0.47
SS18-222ENST00000582792 MYO1GB0I1T2 1018 aa12.13□□□□□ -0.47
SS18-222ENST00000582792 SHISA8B8ZZ34 492 aa12.13□□□□□ -0.47
SS18-222ENST00000582792 SLCO1B7G3V0H7 640 aa12.13□□□□□ -0.47
SS18-222ENST00000582792 OVOL3O00110 214 aa12.13□□□□□ -0.47
SS18-222ENST00000582792 EIF1AYO14602 144 aaKnown RBP12.13□□□□□ -0.47
SS18-222ENST00000582792 SLITRK5O94991 958 aa12.13□□□□□ -0.47
SS18-222ENST00000582792 IL33O95760 270 aa12.13□□□□□ -0.47
SS18-222ENST00000582792 EIF1AXP47813 144 aaKnown RBP12.13□□□□□ -0.47
SS18-222ENST00000582792 C17orf67Q0P5P2 114 aa12.13□□□□□ -0.47
SS18-222ENST00000582792 DECR1Q16698 335 aa12.13□□□□□ -0.47
SS18-222ENST00000582792 IMPG1Q17R60 797 aa12.13□□□□□ -0.47
SS18-222ENST00000582792 HMBOX1Q6NT76 420 aa12.13□□□□□ -0.47
SS18-222ENST00000582792 PPP4R4Q6NUP7 873 aa12.13□□□□□ -0.47
SS18-222ENST00000582792 ADAM5Q6NVV9 412 aa12.13□□□□□ -0.47
SS18-222ENST00000582792 BEND4Q6ZU67 534 aa12.13□□□□□ -0.47
SS18-222ENST00000582792 WFDC8Q8IUA0 241 aa12.13□□□□□ -0.47
SS18-222ENST00000582792 LRRC34Q8IZ02 419 aa12.13□□□□□ -0.47
SS18-222ENST00000582792 TWIST2Q8WVJ9 160 aa12.13□□□□□ -0.47
SS18-222ENST00000582792 AKAP1Q92667 903 aaKnown RBP eCLIP12.13□□□□□ -0.47
SS18-222ENST00000582792 APIPQ96GX9 242 aa12.13□□□□□ -0.47
SS18-222ENST00000582792 BBS4Q96RK4 519 aa12.13□□□□□ -0.47
SS18-222ENST00000582792 C20orf27Q9GZN8 174 aa12.13□□□□□ -0.47
SS18-222ENST00000582792 TUBB1Q9H4B7 451 aa12.13□□□□□ -0.47
SS18-222ENST00000582792 Q9N2J8 555 aa12.13□□□□□ -0.47
SS18-222ENST00000582792 PAQR5Q9NXK6 330 aaPredicted RBP12.13□□□□□ -0.47
SS18-222ENST00000582792 STOML1Q9UBI4 398 aa12.13□□□□□ -0.47
SS18-222ENST00000582792 MRTO4Q9UKD2 239 aaKnown RBP12.13□□□□□ -0.47
SS18-222ENST00000582792 C19orf53Q9UNZ5 99 aaPredicted RBP12.13□□□□□ -0.47
SS18-222ENST00000582792 LAMP3Q9UQV4 416 aa12.13□□□□□ -0.47
SS18-222ENST00000582792 GPR52Q9Y2T5 361 aa12.13□□□□□ -0.47
SS18-222ENST00000582792 NBEAL1Q6ZS30 2694 aa12.13□□□□□ -0.47
SS18-222ENST00000582792 CR1P17927 2039 aa12.12□□□□□ -0.47
SS18-222ENST00000582792 LYPLA1O75608 230 aaPredicted RBP12.12□□□□□ -0.47
SS18-222ENST00000582792 PSMG1O95456 288 aa12.12□□□□□ -0.47
SS18-222ENST00000582792 ANGPTL1O95841 491 aa12.12□□□□□ -0.47
SS18-222ENST00000582792 JUNP05412 331 aaKnown RBP12.12□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms