RNA–Protein interactions for RNA: ENST00000582453.5

MSI2-215, Transcript of musashi RNA binding protein 2, human

TSL 3

Gene MSI2, Length 496 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MSI2-215	ENST00000582453	NUS1	Q96E22	293 aa		2.82	□□□□□ -1.96
MSI2-215	ENST00000582453	SNF8	Q96H20	258 aa		2.82	□□□□□ -1.96
MSI2-215	ENST00000582453	COX14	Q96I36	57 aa		2.82	□□□□□ -1.96
MSI2-215	ENST00000582453	ZNF514	Q96K75	400 aa	Predicted RBP	2.82	□□□□□ -1.96
MSI2-215	ENST00000582453	TBL1Y	Q9BQ87	522 aa		2.82	□□□□□ -1.96
MSI2-215	ENST00000582453	ERP44	Q9BS26	406 aa		2.82	□□□□□ -1.96
MSI2-215	ENST00000582453	FICD	Q9BVA6	458 aa		2.82	□□□□□ -1.96
MSI2-215	ENST00000582453	KIFC1	Q9BW19	673 aa		2.82	□□□□□ -1.96
MSI2-215	ENST00000582453	DDX47	Q9H0S4	455 aa	Known RBP	2.82	□□□□□ -1.96
MSI2-215	ENST00000582453	RAB17	Q9H0T7	212 aa		2.82	□□□□□ -1.96
MSI2-215	ENST00000582453	ABCG8	Q9H221	673 aa		2.82	□□□□□ -1.96
MSI2-215	ENST00000582453	CDH20	Q9HBT6	801 aa		2.82	□□□□□ -1.96
MSI2-215	ENST00000582453	TM9SF3	Q9HD45	589 aa		2.82	□□□□□ -1.96
MSI2-215	ENST00000582453	MID1IP1	Q9NPA3	183 aa		2.82	□□□□□ -1.96
MSI2-215	ENST00000582453	IARS2	Q9NSE4	1012 aa	Known RBP	2.82	□□□□□ -1.96
MSI2-215	ENST00000582453	TREX1	Q9NSU2	369 aa		2.82	□□□□□ -1.96
MSI2-215	ENST00000582453	NLE1	Q9NVX2	485 aa	Predicted RBP	2.82	□□□□□ -1.96
MSI2-215	ENST00000582453	IL17C	Q9P0M4	197 aa		2.82	□□□□□ -1.96
MSI2-215	ENST00000582453	VPS18	Q9P253	973 aa		2.82	□□□□□ -1.96
MSI2-215	ENST00000582453	GMEB2	Q9UKD1	530 aa		2.82	□□□□□ -1.96
MSI2-215	ENST00000582453	CHKB	Q9Y259	395 aa		2.82	□□□□□ -1.96
MSI2-215	ENST00000582453	SLC17A4	Q9Y2C5	497 aa		2.82	□□□□□ -1.96
MSI2-215	ENST00000582453		R4GN57	208 aa		2.82	□□□□□ -1.96
MSI2-215	ENST00000582453	TICRR	Q7Z2Z1	1910 aa		2.81	□□□□□ -1.96
MSI2-215	ENST00000582453	GPR179	Q6PRD1	2367 aa		2.81	□□□□□ -1.96
MSI2-215	ENST00000582453		A0A0C4DFX4	3053 aa		2.81	□□□□□ -1.96
MSI2-215	ENST00000582453	GLYATL1P3	A0A0U1RQE8	302 aa		2.81	□□□□□ -1.96
MSI2-215	ENST00000582453	C1orf232	A0A0U1RR37	186 aa		2.81	□□□□□ -1.96
MSI2-215	ENST00000582453	MED19	A0JLT2	244 aa	Predicted RBP	2.81	□□□□□ -1.96
MSI2-215	ENST00000582453	IGLON5	A6NGN9	336 aa		2.81	□□□□□ -1.96
MSI2-215	ENST00000582453	SDR42E2	A6NKP2	422 aa		2.81	□□□□□ -1.96
MSI2-215	ENST00000582453	TLR4	O00206	839 aa		2.81	□□□□□ -1.96
MSI2-215	ENST00000582453	CACNB4	O00305	520 aa	Predicted RBP	2.81	□□□□□ -1.96
MSI2-215	ENST00000582453	GAPDHS	O14556	408 aa	Predicted RBP	2.81	□□□□□ -1.96
MSI2-215	ENST00000582453	CHUK	O15111	745 aa		2.81	□□□□□ -1.96
MSI2-215	ENST00000582453	RAD51B	O15315	384 aa		2.81	□□□□□ -1.96
MSI2-215	ENST00000582453	STX7	O15400	261 aa	Known RBP	2.81	□□□□□ -1.96
MSI2-215	ENST00000582453	TTI1	O43156	1089 aa		2.81	□□□□□ -1.96
MSI2-215	ENST00000582453	RAD51C	O43502	376 aa		2.81	□□□□□ -1.96
MSI2-215	ENST00000582453	CIDEA	O60543	219 aa		2.81	□□□□□ -1.96
MSI2-215	ENST00000582453	NME6	O75414	186 aa	Predicted RBP	2.81	□□□□□ -1.96
MSI2-215	ENST00000582453	SPAG6	O75602	509 aa		2.81	□□□□□ -1.96
MSI2-215	ENST00000582453	AP2A2	O94973	939 aa		2.81	□□□□□ -1.96
MSI2-215	ENST00000582453	SOD1	P00441	154 aa		2.81	□□□□□ -1.96
MSI2-215	ENST00000582453	AGT	P01019	485 aa		2.81	□□□□□ -1.96
MSI2-215	ENST00000582453	CGA	P01215	116 aa		2.81	□□□□□ -1.96
MSI2-215	ENST00000582453	APOH	P02749	345 aa	Predicted RBP	2.81	□□□□□ -1.96
MSI2-215	ENST00000582453	CSF2	P04141	144 aa		2.81	□□□□□ -1.96
MSI2-215	ENST00000582453	IVL	P07476	585 aa		2.81	□□□□□ -1.96
MSI2-215	ENST00000582453	GSTA2	P09210	222 aa		2.81	□□□□□ -1.96
MSI2-215	ENST00000582453	ALPI	P09923	528 aa		2.81	□□□□□ -1.96
MSI2-215	ENST00000582453	ZSCAN5DP	P0CG00	497 aa		2.81	□□□□□ -1.96
MSI2-215	ENST00000582453	IGHV4-38-2	P0DP08	117 aa		2.81	□□□□□ -1.96
MSI2-215	ENST00000582453	ERVK-10	P10266	1014 aa		2.81	□□□□□ -1.96
MSI2-215	ENST00000582453	SPP1	P10451	314 aa		2.81	□□□□□ -1.96
MSI2-215	ENST00000582453	PGAM1	P18669	254 aa		2.81	□□□□□ -1.96
MSI2-215	ENST00000582453	OGN	P20774	298 aa	Known RBP	2.81	□□□□□ -1.96
MSI2-215	ENST00000582453	CD9	P21926	228 aa		2.81	□□□□□ -1.96
MSI2-215	ENST00000582453	CBL	P22681	906 aa		2.81	□□□□□ -1.96
MSI2-215	ENST00000582453	SLC6A6	P31641	620 aa		2.81	□□□□□ -1.96
MSI2-215	ENST00000582453	ATP6V1E1	P36543	226 aa		2.81	□□□□□ -1.96
MSI2-215	ENST00000582453	SPAM1	P38567	509 aa		2.81	□□□□□ -1.96
MSI2-215	ENST00000582453	FRK	P42685	505 aa	Predicted RBP	2.81	□□□□□ -1.96
MSI2-215	ENST00000582453	RPL21	P46778	160 aa	Known RBP	2.81	□□□□□ -1.96
MSI2-215	ENST00000582453	CDX1	P47902	265 aa	Predicted RBP	2.81	□□□□□ -1.96
MSI2-215	ENST00000582453	DHPS	P49366	369 aa	Predicted RBP	2.81	□□□□□ -1.96
MSI2-215	ENST00000582453	ARRB1	P49407	418 aa	Predicted RBP	2.81	□□□□□ -1.96
MSI2-215	ENST00000582453	CLK1	P49759	484 aa	Known RBP	2.81	□□□□□ -1.96
MSI2-215	ENST00000582453	THOP1	P52888	689 aa		2.81	□□□□□ -1.96
MSI2-215	ENST00000582453	ATP12A	P54707	1039 aa		2.81	□□□□□ -1.96
MSI2-215	ENST00000582453	SNU13	P55769	128 aa	Known RBP	2.81	□□□□□ -1.96
MSI2-215	ENST00000582453	MTCP1	P56278	107 aa		2.81	□□□□□ -1.96
MSI2-215	ENST00000582453	C21orf59	P57076	290 aa		2.81	□□□□□ -1.96
MSI2-215	ENST00000582453	BPIFB3	P59826	476 aa		2.81	□□□□□ -1.96
MSI2-215	ENST00000582453	STX1B	P61266	288 aa		2.81	□□□□□ -1.96
MSI2-215	ENST00000582453	BASP1	P80723	227 aa	Known RBP	2.81	□□□□□ -1.96
MSI2-215	ENST00000582453	XIAP	P98170	497 aa		2.81	□□□□□ -1.96
MSI2-215	ENST00000582453	CACNG1	Q06432	222 aa		2.81	□□□□□ -1.96
MSI2-215	ENST00000582453	DMPK	Q09013	629 aa		2.81	□□□□□ -1.96
MSI2-215	ENST00000582453	CALCOCO2	Q13137	446 aa		2.81	□□□□□ -1.96
MSI2-215	ENST00000582453	SRSF5	Q13243	272 aa	Known RBP	2.81	□□□□□ -1.96
MSI2-215	ENST00000582453	NFATC2	Q13469	925 aa		2.81	□□□□□ -1.96
MSI2-215	ENST00000582453	NAB1	Q13506	487 aa		2.81	□□□□□ -1.96
MSI2-215	ENST00000582453	SNX1	Q13596	522 aa		2.81	□□□□□ -1.96
MSI2-215	ENST00000582453	PEX6	Q13608	980 aa		2.81	□□□□□ -1.96
MSI2-215	ENST00000582453	CUL1	Q13616	776 aa		2.81	□□□□□ -1.96
MSI2-215	ENST00000582453	ITGA9	Q13797	1035 aa		2.81	□□□□□ -1.96
MSI2-215	ENST00000582453	IRF4	Q15306	451 aa		2.81	□□□□□ -1.96
MSI2-215	ENST00000582453	PPP1R7	Q15435	360 aa		2.81	□□□□□ -1.96
MSI2-215	ENST00000582453	CLPP	Q16740	277 aa	Predicted RBP	2.81	□□□□□ -1.96
MSI2-215	ENST00000582453	HFE	Q30201	348 aa		2.81	□□□□□ -1.96
MSI2-215	ENST00000582453	KBTBD12	Q3ZCT8	623 aa		2.81	□□□□□ -1.96
MSI2-215	ENST00000582453	BCL7A	Q4VC05	210 aa		2.81	□□□□□ -1.96
MSI2-215	ENST00000582453	ZNF789	Q5FWF6	425 aa		2.81	□□□□□ -1.96
MSI2-215	ENST00000582453	LDLRAP1	Q5SW96	308 aa		2.81	□□□□□ -1.96
MSI2-215	ENST00000582453	LYPLAL1	Q5VWZ2	237 aa		2.81	□□□□□ -1.96
MSI2-215	ENST00000582453	STEAP4	Q687X5	459 aa		2.81	□□□□□ -1.96
MSI2-215	ENST00000582453	SEL1L3	Q68CR1	1132 aa		2.81	□□□□□ -1.96
MSI2-215	ENST00000582453	C8orf74	Q6P047	294 aa		2.81	□□□□□ -1.96
MSI2-215	ENST00000582453	PNCK	Q6P2M8	343 aa		2.81	□□□□□ -1.96

Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms