RNA–Protein interactions for RNA: ENST00000581598.1

CCDC42-203, Transcript of coiled-coil domain containing 42, humanhuman

TSL 4

Gene CCDC42, Length 538 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC42-203ENST00000581598 C10orf82Q8WW14 230 aa18.87■□□□□ 0.61
CCDC42-203ENST00000581598 THOC1Q96FV9 657 aaKnown RBP18.87■□□□□ 0.61
CCDC42-203ENST00000581598 MS4A4EQ96PG1 132 aa18.87■□□□□ 0.61
CCDC42-203ENST00000581598 ELAC2Q9BQ52 826 aaKnown RBP18.87■□□□□ 0.61
CCDC42-203ENST00000581598 TBL1XR1Q9BZK7 514 aa18.87■□□□□ 0.61
CCDC42-203ENST00000581598 SH3BP4Q9P0V3 963 aa18.87■□□□□ 0.61
CCDC42-203ENST00000581598 DCTN4Q9UJW0 460 aa18.87■□□□□ 0.61
CCDC42-203ENST00000581598 ZNF175Q9Y473 711 aa18.87■□□□□ 0.61
CCDC42-203ENST00000581598 HRNRQ86YZ3 2850 aaPredicted RBP18.87■□□□□ 0.61
CCDC42-203ENST00000581598 NF1P21359 2839 aa18.86■□□□□ 0.61
CCDC42-203ENST00000581598 ALG1L2C9J202 215 aa18.86■□□□□ 0.61
CCDC42-203ENST00000581598 AKAP10O43572 662 aa18.86■□□□□ 0.61
CCDC42-203ENST00000581598 ANGPTL1O95841 491 aa18.86■□□□□ 0.61
CCDC42-203ENST00000581598 BCKDHAP12694 445 aa18.86■□□□□ 0.61
CCDC42-203ENST00000581598 CBX1P83916 185 aa18.86■□□□□ 0.61
CCDC42-203ENST00000581598 CPEB4Q17RY0 729 aaKnown RBP eCLIP18.86■□□□□ 0.61
CCDC42-203ENST00000581598 GRAMD1BQ3KR37 738 aa18.86■□□□□ 0.61
CCDC42-203ENST00000581598 SLC9B1Q4ZJI4 515 aa18.86■□□□□ 0.61
CCDC42-203ENST00000581598 EXOSC6Q5RKV6 272 aaKnown RBP18.86■□□□□ 0.61
CCDC42-203ENST00000581598 APOOLQ6UXV4 268 aa18.86■□□□□ 0.61
CCDC42-203ENST00000581598 GPR151Q8TDV0 419 aa18.86■□□□□ 0.61
CCDC42-203ENST00000581598 PIK3R3Q92569 461 aa18.86■□□□□ 0.61
CCDC42-203ENST00000581598 ALPK1Q96QP1 1244 aa18.86■□□□□ 0.61
CCDC42-203ENST00000581598 EQTNQ9NQ60 294 aa18.86■□□□□ 0.61
CCDC42-203ENST00000581598 BAIAP2L1Q9UHR4 511 aa18.86■□□□□ 0.61
CCDC42-203ENST00000581598 ATP6V1HQ9UI12 483 aa18.86■□□□□ 0.61
CCDC42-203ENST00000581598 AP4B1Q9Y6B7 739 aa18.86■□□□□ 0.61
CCDC42-203ENST00000581598 MTORP42345 2549 aa18.86■□□□□ 0.61
CCDC42-203ENST00000581598 SH3D21A4FU49 640 aa18.85■□□□□ 0.61
CCDC42-203ENST00000581598 EMC8O43402 210 aa18.85■□□□□ 0.61
CCDC42-203ENST00000581598 MAPK1P28482 360 aa18.85■□□□□ 0.61
CCDC42-203ENST00000581598 RPL3P39023 403 aaKnown RBP18.85■□□□□ 0.61
CCDC42-203ENST00000581598 RFX3P48380 749 aa18.85■□□□□ 0.61
CCDC42-203ENST00000581598 SUCLG1P53597 346 aaKnown RBP18.85■□□□□ 0.61
CCDC42-203ENST00000581598 UBQLNLQ8IYU4 475 aa18.85■□□□□ 0.61
CCDC42-203ENST00000581598 METTL25Q8N6Q8 603 aa18.85■□□□□ 0.61
CCDC42-203ENST00000581598 ACTRT2Q8TDY3 377 aa18.85■□□□□ 0.61
CCDC42-203ENST00000581598 STARD4Q96DR4 205 aa18.85■□□□□ 0.61
CCDC42-203ENST00000581598 PPP3R2Q96LZ3 170 aa18.85■□□□□ 0.61
CCDC42-203ENST00000581598 EBF4Q9BQW3 602 aa18.85■□□□□ 0.61
CCDC42-203ENST00000581598 YIPF4Q9BSR8 244 aa18.85■□□□□ 0.61
CCDC42-203ENST00000581598 TMUB1Q9BVT8 246 aa18.85■□□□□ 0.61
CCDC42-203ENST00000581598 TMEM120AQ9BXJ8 343 aa18.85■□□□□ 0.61
CCDC42-203ENST00000581598 RABEP2Q9H5N1 569 aa18.85■□□□□ 0.61
CCDC42-203ENST00000581598 PLEKHF2Q9H8W4 249 aa18.85■□□□□ 0.61
CCDC42-203ENST00000581598 PLEKHA6Q9Y2H5 1048 aa18.85■□□□□ 0.61
CCDC42-203ENST00000581598 A0A0G2JND7 137 aa18.84■□□□□ 0.61
CCDC42-203ENST00000581598 DIAPH2O60879 1101 aa18.84■□□□□ 0.61
CCDC42-203ENST00000581598 HRGP04196 525 aa18.84■□□□□ 0.61
CCDC42-203ENST00000581598 ACP2P11117 423 aa18.84■□□□□ 0.61
CCDC42-203ENST00000581598 TBXA2RP21731 343 aa18.84■□□□□ 0.61
CCDC42-203ENST00000581598 EPHA3P29320 983 aa18.84■□□□□ 0.61
CCDC42-203ENST00000581598 PRKAG1P54619 331 aa18.84■□□□□ 0.61
CCDC42-203ENST00000581598 FGFBP1Q14512 234 aa18.84■□□□□ 0.61
CCDC42-203ENST00000581598 GALNTL6Q49A17 601 aa18.84■□□□□ 0.61
CCDC42-203ENST00000581598 MFSD12Q6NUT3 480 aa18.84■□□□□ 0.61
CCDC42-203ENST00000581598 TGIF2LYQ8IUE0 185 aa18.84■□□□□ 0.61
CCDC42-203ENST00000581598 CLHC1Q8NHS4 586 aa18.84■□□□□ 0.61
CCDC42-203ENST00000581598 SMPDL3BQ92485 455 aa18.84■□□□□ 0.61
CCDC42-203ENST00000581598 FIG4Q92562 907 aa18.84■□□□□ 0.61
CCDC42-203ENST00000581598 SLC9A6Q92581 669 aa18.84■□□□□ 0.61
CCDC42-203ENST00000581598 PPP1R36Q96LQ0 422 aa18.84■□□□□ 0.61
CCDC42-203ENST00000581598 CCDC28BQ9BUN5 200 aa18.84■□□□□ 0.61
CCDC42-203ENST00000581598 WDR55Q9H6Y2 383 aaPredicted RBP18.84■□□□□ 0.61
CCDC42-203ENST00000581598 RNF122Q9H9V4 155 aa18.84■□□□□ 0.61
CCDC42-203ENST00000581598 GIN1Q9NXP7 522 aa18.84■□□□□ 0.61
CCDC42-203ENST00000581598 NDRG3Q9UGV2 375 aa18.84■□□□□ 0.61
CCDC42-203ENST00000581598 A0A087WZY1 265 aa18.83■□□□□ 0.6
CCDC42-203ENST00000581598 H3BML4 177 aa18.83■□□□□ 0.6
CCDC42-203ENST00000581598 KCNK2O95069 426 aa18.83■□□□□ 0.6
CCDC42-203ENST00000581598 OXSR1O95747 527 aaPredicted RBP18.83■□□□□ 0.6
CCDC42-203ENST00000581598 RAF1P04049 648 aa18.83■□□□□ 0.6
CCDC42-203ENST00000581598 ZNF17P17021 662 aa18.83■□□□□ 0.6
CCDC42-203ENST00000581598 HPCAL1P37235 193 aa18.83■□□□□ 0.6
CCDC42-203ENST00000581598 KIR2DL2P43627 348 aaPredicted RBP18.83■□□□□ 0.6
CCDC42-203ENST00000581598 PRIM2P49643 509 aa18.83■□□□□ 0.6
CCDC42-203ENST00000581598 ARFIP2P53365 341 aa18.83■□□□□ 0.6
CCDC42-203ENST00000581598 CLDN20P56880 219 aa18.83■□□□□ 0.6
CCDC42-203ENST00000581598 RPS3AP61247 264 aaKnown RBP18.83■□□□□ 0.6
CCDC42-203ENST00000581598 SMU1Q2TAY7 513 aa18.83■□□□□ 0.6
CCDC42-203ENST00000581598 FBXW10Q5XX13 1052 aa18.83■□□□□ 0.6
CCDC42-203ENST00000581598 OGFOD2Q6N063 350 aa18.83■□□□□ 0.6
CCDC42-203ENST00000581598 VWA1Q6PCB0 445 aa18.83■□□□□ 0.6
CCDC42-203ENST00000581598 MISPQ8IVT2 679 aa18.83■□□□□ 0.6
CCDC42-203ENST00000581598 NATD1Q8N6N6 113 aa18.83■□□□□ 0.6
CCDC42-203ENST00000581598 SLC16A11Q8NCK7 471 aa18.83■□□□□ 0.6
CCDC42-203ENST00000581598 OR4C3Q8NH37 302 aa18.83■□□□□ 0.6
CCDC42-203ENST00000581598 TUBGCP3Q96CW5 907 aa18.83■□□□□ 0.6
CCDC42-203ENST00000581598 OR52B2Q96RD2 323 aa18.83■□□□□ 0.6
CCDC42-203ENST00000581598 PINK1Q9BXM7 581 aa18.83■□□□□ 0.6
CCDC42-203ENST00000581598 AKTIPQ9H8T0 292 aa18.83■□□□□ 0.6
CCDC42-203ENST00000581598 STOML1Q9UBI4 398 aa18.83■□□□□ 0.6
CCDC42-203ENST00000581598 TESMINQ9Y4I5 508 aa18.83■□□□□ 0.6
CCDC42-203ENST00000581598 GOLGA8QA0A0J9YX86 632 aa18.82■□□□□ 0.6
CCDC42-203ENST00000581598 A0A1W2PQD3 144 aa18.82■□□□□ 0.6
CCDC42-203ENST00000581598 C7orf72A4D263 438 aa18.82■□□□□ 0.6
CCDC42-203ENST00000581598 GOLGA8OA6NCC3 632 aa18.82■□□□□ 0.6
CCDC42-203ENST00000581598 GOLGA8NF8WBI6 632 aa18.82■□□□□ 0.6
CCDC42-203ENST00000581598 H0YC42 278 aa18.82■□□□□ 0.6
CCDC42-203ENST00000581598 SCAMP2O15127 329 aaKnown RBP18.82■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms