RNA–Protein interactions for RNA: ENST00000581383.1

SMCHD1-205, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 3

Gene SMCHD1, Length 806 nt, Biotype retained intron, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-205ENST00000581383 B3GAT3O94766 335 aa3.48□□□□□ -1.85
SMCHD1-205ENST00000581383 OPN1LWP04000 364 aa3.48□□□□□ -1.85
SMCHD1-205ENST00000581383 GIG44P09565 113 aaPredicted RBP3.48□□□□□ -1.85
SMCHD1-205ENST00000581383 SOX6P35712 828 aa3.48□□□□□ -1.85
SMCHD1-205ENST00000581383 DHPSP49366 369 aaPredicted RBP3.48□□□□□ -1.85
SMCHD1-205ENST00000581383 ACADVLP49748 655 aa3.48□□□□□ -1.85
SMCHD1-205ENST00000581383 PJVKQ0ZLH3 352 aa3.48□□□□□ -1.85
SMCHD1-205ENST00000581383 SNTB2Q13425 540 aaKnown RBP3.48□□□□□ -1.85
SMCHD1-205ENST00000581383 NADK2Q4G0N4 442 aa3.48□□□□□ -1.85
SMCHD1-205ENST00000581383 GALNT17Q6IS24 598 aa3.48□□□□□ -1.85
SMCHD1-205ENST00000581383 SLC25A24Q6NUK1 477 aa3.48□□□□□ -1.85
SMCHD1-205ENST00000581383 UFSP1Q6NVU6 142 aa3.48□□□□□ -1.85
SMCHD1-205ENST00000581383 KIAA1328Q86T90 577 aa3.48□□□□□ -1.85
SMCHD1-205ENST00000581383 TMEM17Q86X19 198 aa3.48□□□□□ -1.85
SMCHD1-205ENST00000581383 ZDHHC21Q8IVQ6 265 aa3.48□□□□□ -1.85
SMCHD1-205ENST00000581383 ZBED8Q8IZ13 594 aa3.48□□□□□ -1.85
SMCHD1-205ENST00000581383 LINC01561Q8N1V8 128 aa3.48□□□□□ -1.85
SMCHD1-205ENST00000581383 PNPT1Q8TCS8 783 aaKnown RBP3.48□□□□□ -1.85
SMCHD1-205ENST00000581383 TRUB1Q8WWH5 349 aaKnown RBP3.48□□□□□ -1.85
SMCHD1-205ENST00000581383 MYLPFQ96A32 169 aa3.48□□□□□ -1.85
SMCHD1-205ENST00000581383 TMEM80Q96HE8 168 aa3.48□□□□□ -1.85
SMCHD1-205ENST00000581383 VSIG2Q96IQ7 327 aa3.48□□□□□ -1.85
SMCHD1-205ENST00000581383 SERAC1Q96JX3 654 aa3.48□□□□□ -1.85
SMCHD1-205ENST00000581383 DPH7Q9BTV6 452 aa3.48□□□□□ -1.85
SMCHD1-205ENST00000581383 MEAF6Q9HAF1 191 aa3.48□□□□□ -1.85
SMCHD1-205ENST00000581383 PPIAL4AQ9Y536 164 aa3.48□□□□□ -1.85
SMCHD1-205ENST00000581383 SPACA6W5XKT8 324 aa3.48□□□□□ -1.85
SMCHD1-205ENST00000581383 ANKRD30BQ9BXX2 1392 aa3.48□□□□□ -1.85
SMCHD1-205ENST00000581383 ATP10DQ9P241 1426 aa3.47□□□□□ -1.85
SMCHD1-205ENST00000581383 IGLV3-10A0A075B6K4 115 aa3.47□□□□□ -1.85
SMCHD1-205ENST00000581383 A0A1W2PNU3 283 aaPredicted RBP3.47□□□□□ -1.85
SMCHD1-205ENST00000581383 GSAPA4D1B5 854 aa3.47□□□□□ -1.85
SMCHD1-205ENST00000581383 A8MUI8 341 aa3.47□□□□□ -1.85
SMCHD1-205ENST00000581383 NEBLO76041 1014 aa3.47□□□□□ -1.85
SMCHD1-205ENST00000581383 CD55P08174 381 aa3.47□□□□□ -1.85
SMCHD1-205ENST00000581383 CLUP10909 449 aa3.47□□□□□ -1.85
SMCHD1-205ENST00000581383 PAX7P23759 505 aa3.47□□□□□ -1.85
SMCHD1-205ENST00000581383 RND3P61587 244 aa3.47□□□□□ -1.85
SMCHD1-205ENST00000581383 EWSR1Q01844 656 aaKnown RBP eCLIP3.47□□□□□ -1.85
SMCHD1-205ENST00000581383 SLC36A3Q495N2 470 aa3.47□□□□□ -1.85
SMCHD1-205ENST00000581383 UTF1Q5T230 341 aa3.47□□□□□ -1.85
SMCHD1-205ENST00000581383 PVRIGQ6DKI7 326 aa3.47□□□□□ -1.85
SMCHD1-205ENST00000581383 ACSM5Q6NUN0 579 aa3.47□□□□□ -1.85
SMCHD1-205ENST00000581383 CES3Q6UWW8 571 aa3.47□□□□□ -1.85
SMCHD1-205ENST00000581383 OR2T34Q8NGX1 318 aa3.47□□□□□ -1.85
SMCHD1-205ENST00000581383 IL1F10Q8WWZ1 152 aa3.47□□□□□ -1.85
SMCHD1-205ENST00000581383 OSTF1Q92882 214 aa3.47□□□□□ -1.85
SMCHD1-205ENST00000581383 PSMG2Q969U7 264 aa3.47□□□□□ -1.85
SMCHD1-205ENST00000581383 VPS39Q96JC1 886 aa3.47□□□□□ -1.85
SMCHD1-205ENST00000581383 PAXXQ9BUH6 204 aa3.47□□□□□ -1.85
SMCHD1-205ENST00000581383 ZNF275Q9NSD4 429 aaPredicted RBP3.47□□□□□ -1.85
SMCHD1-205ENST00000581383 PAK1IP1Q9NWT1 392 aaPredicted RBP3.47□□□□□ -1.85
SMCHD1-205ENST00000581383 CDX4O14627 284 aaPredicted RBP3.46□□□□□ -1.86
SMCHD1-205ENST00000581383 XPO1O14980 1071 aaKnown RBP3.46□□□□□ -1.86
SMCHD1-205ENST00000581383 ANGPT2O15123 496 aa3.46□□□□□ -1.86
SMCHD1-205ENST00000581383 ZNF254O75437 659 aa3.46□□□□□ -1.86
SMCHD1-205ENST00000581383 PGK1P00558 417 aa3.46□□□□□ -1.86
SMCHD1-205ENST00000581383 F10P00742 488 aa3.46□□□□□ -1.86
SMCHD1-205ENST00000581383 KRT8P05787 483 aa3.46□□□□□ -1.86
SMCHD1-205ENST00000581383 PDHBP11177 359 aa3.46□□□□□ -1.86
SMCHD1-205ENST00000581383 KLK2P20151 261 aa3.46□□□□□ -1.86
SMCHD1-205ENST00000581383 HNRNPA2B1P22626 353 aaKnown RBP3.46□□□□□ -1.86
SMCHD1-205ENST00000581383 PSMA5P28066 241 aa3.46□□□□□ -1.86
SMCHD1-205ENST00000581383 PRKAR2BP31323 418 aa3.46□□□□□ -1.86
SMCHD1-205ENST00000581383 MEOX2P50222 304 aa3.46□□□□□ -1.86
SMCHD1-205ENST00000581383 PLA2G16P53816 162 aa3.46□□□□□ -1.86
SMCHD1-205ENST00000581383 RPL32P62910 135 aaKnown RBP3.46□□□□□ -1.86
SMCHD1-205ENST00000581383 TPD52L1Q16890 204 aaPredicted RBP3.46□□□□□ -1.86
SMCHD1-205ENST00000581383 ZNF658Q5TYW1 1059 aaPredicted RBP3.46□□□□□ -1.86
SMCHD1-205ENST00000581383 APTXQ7Z2E3 356 aaKnown RBP3.46□□□□□ -1.86
SMCHD1-205ENST00000581383 SERPINA9Q86WD7 417 aa3.46□□□□□ -1.86
SMCHD1-205ENST00000581383 LRRC43Q8N309 656 aa3.46□□□□□ -1.86
SMCHD1-205ENST00000581383 CADM2Q8N3J6 435 aa3.46□□□□□ -1.86
SMCHD1-205ENST00000581383 ZNF525Q8N782 197 aa3.46□□□□□ -1.86
SMCHD1-205ENST00000581383 DENND6BQ8NEG7 585 aa3.46□□□□□ -1.86
SMCHD1-205ENST00000581383 ERP44Q9BS26 406 aa3.46□□□□□ -1.86
SMCHD1-205ENST00000581383 RAB33BQ9H082 229 aa3.46□□□□□ -1.86
SMCHD1-205ENST00000581383 AATFQ9NY61 560 aaKnown RBP eCLIP3.46□□□□□ -1.862e-8■■■■□ 22.6
SMCHD1-205ENST00000581383 SNX6Q9UNH7 406 aa3.46□□□□□ -1.86
SMCHD1-205ENST00000581383 SAMD4AQ9UPU9 718 aaKnown RBP3.46□□□□□ -1.86
SMCHD1-205ENST00000581383 OR10H1Q9Y4A9 318 aa3.46□□□□□ -1.86
SMCHD1-205ENST00000581383 USP16Q9Y5T5 823 aa3.46□□□□□ -1.86
SMCHD1-205ENST00000581383 AGRNO00468 2067 aa3.46□□□□□ -1.86
SMCHD1-205ENST00000581383 PPIAL4DF5H284 164 aa3.45□□□□□ -1.86
SMCHD1-205ENST00000581383 H3BMQ9 156 aa3.45□□□□□ -1.86
SMCHD1-205ENST00000581383 ZSCAN12O43309 604 aa3.45□□□□□ -1.86
SMCHD1-205ENST00000581383 CCDC166P0CW27 439 aa3.45□□□□□ -1.86
SMCHD1-205ENST00000581383 DNAH10OSP0CZ25 163 aa3.45□□□□□ -1.86
SMCHD1-205ENST00000581383 NT5EP21589 574 aa3.45□□□□□ -1.86
SMCHD1-205ENST00000581383 ADORA2BP29275 332 aa3.45□□□□□ -1.86
SMCHD1-205ENST00000581383 CA8P35219 290 aa3.45□□□□□ -1.86
SMCHD1-205ENST00000581383 KRTAP12-2P59991 146 aa3.45□□□□□ -1.86
SMCHD1-205ENST00000581383 MRPS11P82912 194 aaKnown RBP3.45□□□□□ -1.86
SMCHD1-205ENST00000581383 NDUFA9Q16795 377 aa3.45□□□□□ -1.86
SMCHD1-205ENST00000581383 PAGE2BQ5JRK9 111 aa3.45□□□□□ -1.86
SMCHD1-205ENST00000581383 RABGAP1LQ5R372 815 aa3.45□□□□□ -1.86
SMCHD1-205ENST00000581383 OLFML2AQ68BL7 652 aa3.45□□□□□ -1.86
SMCHD1-205ENST00000581383 ZNF677Q86XU0 584 aa3.45□□□□□ -1.86
SMCHD1-205ENST00000581383 GPR137CQ8N3F9 429 aa3.45□□□□□ -1.86
SMCHD1-205ENST00000581383 OR13F1Q8NGS4 319 aa3.45□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms