RNA–Protein interactions for RNA: ENST00000580751.5

SS18-216, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 4

Gene SS18, Length 547 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-216ENST00000580751 NR2F1P10589 423 aa14.2□□□□□ -0.14
SS18-216ENST00000580751 EVI2BP34910 448 aa14.2□□□□□ -0.14
SS18-216ENST00000580751 DNASE1L1P49184 302 aa14.2□□□□□ -0.14
SS18-216ENST00000580751 CLK3P49761 638 aaKnown RBP14.2□□□□□ -0.14
SS18-216ENST00000580751 COLEC12Q5KU26 742 aa14.2□□□□□ -0.14
SS18-216ENST00000580751 DESI1Q6ICB0 168 aa14.2□□□□□ -0.14
SS18-216ENST00000580751 PACS2Q86VP3 889 aa14.2□□□□□ -0.14
SS18-216ENST00000580751 SPATA24Q86W54 205 aa14.2□□□□□ -0.14
SS18-216ENST00000580751 RNF138Q8WVD3 245 aa14.2□□□□□ -0.14
SS18-216ENST00000580751 FAM162AQ96A26 154 aa14.2□□□□□ -0.14
SS18-216ENST00000580751 ZNF597Q96LX8 424 aa14.2□□□□□ -0.14
SS18-216ENST00000580751 FRMD6Q96NE9 622 aa14.2□□□□□ -0.14
SS18-216ENST00000580751 ZNF607Q96SK3 696 aa14.2□□□□□ -0.14
SS18-216ENST00000580751 SDF2Q99470 211 aa14.2□□□□□ -0.14
SS18-216ENST00000580751 HOXD1Q9GZZ0 328 aa14.2□□□□□ -0.14
SS18-216ENST00000580751 MAGIXQ9H6Y5 334 aa14.2□□□□□ -0.14
SS18-216ENST00000580751 DCLRE1BQ9H816 532 aa14.2□□□□□ -0.14
SS18-216ENST00000580751 HHATLQ9HCP6 504 aa14.2□□□□□ -0.14
SS18-216ENST00000580751 UBQLN4Q9NRR5 601 aa14.2□□□□□ -0.14
SS18-216ENST00000580751 AGPAT4Q9NRZ5 378 aa14.2□□□□□ -0.14
SS18-216ENST00000580751 ADPRHL2Q9NX46 363 aa14.2□□□□□ -0.14
SS18-216ENST00000580751 BOKQ9UMX3 212 aaPredicted RBP14.2□□□□□ -0.14
SS18-216ENST00000580751 ACOT7O00154 380 aa14.19□□□□□ -0.14
SS18-216ENST00000580751 ENTPD5O75356 428 aa14.19□□□□□ -0.14
SS18-216ENST00000580751 STX11O75558 287 aa14.19□□□□□ -0.14
SS18-216ENST00000580751 C1QL1O75973 258 aa14.19□□□□□ -0.14
SS18-216ENST00000580751 HPGDP15428 266 aa14.19□□□□□ -0.14
SS18-216ENST00000580751 ZNF24P17028 368 aa14.19□□□□□ -0.14
SS18-216ENST00000580751 ATP6V1B2P21281 511 aa14.19□□□□□ -0.14
SS18-216ENST00000580751 PSMA4P25789 261 aaKnown RBP14.19□□□□□ -0.14
SS18-216ENST00000580751 SLC7A1P30825 629 aa14.19□□□□□ -0.14
SS18-216ENST00000580751 MASP1P48740 699 aa14.19□□□□□ -0.14
SS18-216ENST00000580751 INPP5JQ15735 1006 aaPredicted RBP14.19□□□□□ -0.14
SS18-216ENST00000580751 FLYWCH1Q4VC44 716 aa14.19□□□□□ -0.14
SS18-216ENST00000580751 BICRALQ6AI39 1079 aa14.19□□□□□ -0.14
SS18-216ENST00000580751 GALNT10Q86SR1 603 aa14.19□□□□□ -0.14
SS18-216ENST00000580751 SPPL2CQ8IUH8 684 aa14.19□□□□□ -0.14
SS18-216ENST00000580751 CISD2Q8N5K1 135 aaKnown RBP14.19□□□□□ -0.14
SS18-216ENST00000580751 ZNF527Q8NB42 609 aa14.19□□□□□ -0.14
SS18-216ENST00000580751 PAPD5Q8NDF8 572 aaKnown RBP14.19□□□□□ -0.14
SS18-216ENST00000580751 NFKBIDQ8NI38 313 aa14.19□□□□□ -0.14
SS18-216ENST00000580751 SLC26A7Q8TE54 656 aa14.19□□□□□ -0.14
SS18-216ENST00000580751 GRHL3Q8TE85 626 aa14.19□□□□□ -0.14
SS18-216ENST00000580751 LZICQ8WZA0 190 aa14.19□□□□□ -0.14
SS18-216ENST00000580751 MAL2Q969L2 176 aa14.19□□□□□ -0.14
SS18-216ENST00000580751 SNRNP40Q96DI7 357 aaKnown RBP14.19□□□□□ -0.14
SS18-216ENST00000580751 TMEM19Q96HH6 336 aa14.19□□□□□ -0.14
SS18-216ENST00000580751 TMEM41AQ96HV5 264 aa14.19□□□□□ -0.14
SS18-216ENST00000580751 RSRC1Q96IZ7 334 aaKnown RBP14.19□□□□□ -0.14
SS18-216ENST00000580751 TAAR6Q96RI8 345 aa14.19□□□□□ -0.14
SS18-216ENST00000580751 TREX2Q9BQ50 279 aaPredicted RBP14.19□□□□□ -0.14
SS18-216ENST00000580751 TBL1XR1Q9BZK7 514 aa14.19□□□□□ -0.14
SS18-216ENST00000580751 ZNF350Q9GZX5 532 aa14.19□□□□□ -0.14
SS18-216ENST00000580751 SAP130Q9H0E3 1048 aa14.19□□□□□ -0.14
SS18-216ENST00000580751 YY1AP1Q9H869 796 aa14.19□□□□□ -0.14
SS18-216ENST00000580751 EVA1AQ9H8M9 152 aa14.19□□□□□ -0.14
SS18-216ENST00000580751 MTHFD2LQ9H903 347 aaPredicted RBP14.19□□□□□ -0.14
SS18-216ENST00000580751 CCM2LQ9NUG4 571 aaPredicted RBP14.19□□□□□ -0.14
SS18-216ENST00000580751 ARMC1Q9NVT9 282 aa14.19□□□□□ -0.14
SS18-216ENST00000580751 GMPR2Q9P2T1 348 aaKnown RBP14.19□□□□□ -0.14
SS18-216ENST00000580751 B4GALT7Q9UBV7 327 aa14.19□□□□□ -0.14
SS18-216ENST00000580751 SPENQ96T58 3664 aaKnown RBP14.19□□□□□ -0.14
SS18-216ENST00000580751 DSPPQ9NZW4 1301 aa14.18□□□□□ -0.14
SS18-216ENST00000580751 TCRBV5S2A0A599 114 aa14.18□□□□□ -0.14
SS18-216ENST00000580751 DHRS12A0PJE2 317 aa14.18□□□□□ -0.14
SS18-216ENST00000580751 SCDO00767 359 aa14.18□□□□□ -0.14
SS18-216ENST00000580751 SLC28A2O43868 658 aa14.18□□□□□ -0.14
SS18-216ENST00000580751 FADS1O60427 444 aa14.18□□□□□ -0.14
SS18-216ENST00000580751 TRIM3O75382 744 aaPredicted RBP14.18□□□□□ -0.14
SS18-216ENST00000580751 BCHEP06276 602 aa14.18□□□□□ -0.14
SS18-216ENST00000580751 NCK1P16333 377 aa14.18□□□□□ -0.14
SS18-216ENST00000580751 TBXA2RP21731 343 aa14.18□□□□□ -0.14
SS18-216ENST00000580751 ELAVL4P26378 380 aaKnown RBP14.18□□□□□ -0.14
SS18-216ENST00000580751 PMP22Q01453 160 aa14.18□□□□□ -0.14
SS18-216ENST00000580751 PLGLB1Q02325 96 aa14.18□□□□□ -0.14
SS18-216ENST00000580751 FUT5Q11128 374 aa14.18□□□□□ -0.14
SS18-216ENST00000580751 ZSWIM7Q19AV6 140 aa14.18□□□□□ -0.14
SS18-216ENST00000580751 GRAMD1BQ3KR37 738 aa14.18□□□□□ -0.14
SS18-216ENST00000580751 GPAT3Q53EU6 434 aa14.18□□□□□ -0.14
SS18-216ENST00000580751 CYP2R1Q6VVX0 501 aa14.18□□□□□ -0.14
SS18-216ENST00000580751 CBLL1Q75N03 491 aa14.18□□□□□ -0.14
SS18-216ENST00000580751 EIF3MQ7L2H7 374 aaKnown RBP14.18□□□□□ -0.14
SS18-216ENST00000580751 ZAR1Q86SH2 424 aa14.18□□□□□ -0.14
SS18-216ENST00000580751 SLC22A16Q86VW1 577 aa14.18□□□□□ -0.14
SS18-216ENST00000580751 CPT1CQ8TCG5 803 aa14.18□□□□□ -0.14
SS18-216ENST00000580751 TTTY12Q9BZ98 90 aa14.18□□□□□ -0.14
SS18-216ENST00000580751 PROK2Q9HC23 129 aa14.18□□□□□ -0.14
SS18-216ENST00000580751 ZFP64Q9NPA5 681 aa14.18□□□□□ -0.14
SS18-216ENST00000580751 SDHAF3Q9NRP4 125 aa14.18□□□□□ -0.14
SS18-216ENST00000580751 FBXO34Q9NWN3 711 aa14.18□□□□□ -0.14
SS18-216ENST00000580751 TUBA8Q9NY65 449 aaPredicted RBP14.18□□□□□ -0.14
SS18-216ENST00000580751 USP22Q9UPT9 525 aa14.18□□□□□ -0.14
SS18-216ENST00000580751 WDR45Q9Y484 360 aa14.18□□□□□ -0.14
SS18-216ENST00000580751 WIF1Q9Y5W5 379 aa14.18□□□□□ -0.14
SS18-216ENST00000580751 NBASA2RRP1 2371 aa14.18□□□□□ -0.14
SS18-216ENST00000580751 PINLYPA6NC86 204 aa14.17□□□□□ -0.14
SS18-216ENST00000580751 ALG1L2C9J202 215 aa14.17□□□□□ -0.14
SS18-216ENST00000580751 SNPHO15079 494 aa14.17□□□□□ -0.14
SS18-216ENST00000580751 SCO2O43819 266 aa14.17□□□□□ -0.14
SS18-216ENST00000580751 KIAA0513O60268 411 aa14.17□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms