RNA–Protein interactions for RNA: ENST00000580646.5

GGA3-209, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 4

Gene GGA3, Length 829 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-209ENST00000580646 TYW3Q6IPR3 259 aaKnown RBP9.02□□□□□ -0.97
GGA3-209ENST00000580646 TNFAIP8L2Q6P589 184 aaPredicted RBP9.02□□□□□ -0.97
GGA3-209ENST00000580646 FIGNL1Q6PIW4 674 aa9.02□□□□□ -0.97
GGA3-209ENST00000580646 RPTNQ6XPR3 784 aa9.02□□□□□ -0.97
GGA3-209ENST00000580646 FGD2Q7Z6J4 655 aa9.02□□□□□ -0.97
GGA3-209ENST00000580646 ARPINQ7Z6K5 226 aa9.02□□□□□ -0.97
GGA3-209ENST00000580646 MRGPRGQ86SM5 289 aa9.02□□□□□ -0.97
GGA3-209ENST00000580646 SLC22A16Q86VW1 577 aa9.02□□□□□ -0.97
GGA3-209ENST00000580646 TREML1Q86YW5 311 aa9.02□□□□□ -0.97
GGA3-209ENST00000580646 ZNF808Q8N4W9 903 aaPredicted RBP9.02□□□□□ -0.97
GGA3-209ENST00000580646 ZNF527Q8NB42 609 aa9.02□□□□□ -0.97
GGA3-209ENST00000580646 OR5M3Q8NGP4 307 aa9.02□□□□□ -0.97
GGA3-209ENST00000580646 FAM81AQ8TBF8 368 aa9.02□□□□□ -0.97
GGA3-209ENST00000580646 BCAS4Q8TDM0 211 aa9.02□□□□□ -0.97
GGA3-209ENST00000580646 XAGE5Q8WWM1 108 aa9.02□□□□□ -0.97
GGA3-209ENST00000580646 AURKBQ96GD4 344 aaPredicted RBP9.02□□□□□ -0.97
GGA3-209ENST00000580646 TTTY12Q9BZ98 90 aa9.02□□□□□ -0.97
GGA3-209ENST00000580646 TMEM38AQ9H6F2 299 aa9.02□□□□□ -0.97
GGA3-209ENST00000580646 ZDHHC11Q9H8X9 412 aa9.02□□□□□ -0.97
GGA3-209ENST00000580646 EFCAB1Q9HAE3 211 aa9.02□□□□□ -0.97
GGA3-209ENST00000580646 A4GALTQ9NPC4 353 aa9.02□□□□□ -0.97
GGA3-209ENST00000580646 SDHAF3Q9NRP4 125 aa9.02□□□□□ -0.97
GGA3-209ENST00000580646 TUBA8Q9NY65 449 aaPredicted RBP9.02□□□□□ -0.97
GGA3-209ENST00000580646 B4GALT7Q9UBV7 327 aa9.02□□□□□ -0.97
GGA3-209ENST00000580646 AP3M1Q9Y2T2 418 aa9.02□□□□□ -0.97
GGA3-209ENST00000580646 MRPS18CQ9Y3D5 142 aaKnown RBP9.02□□□□□ -0.97
GGA3-209ENST00000580646 DSPPQ9NZW4 1301 aa9.02□□□□□ -0.97
GGA3-209ENST00000580646 CSMD1Q96PZ7 3565 aa9.01□□□□□ -0.97
GGA3-209ENST00000580646 LOC100653049A0A140TA62 436 aa9.01□□□□□ -0.97
GGA3-209ENST00000580646 A0A1B0GTH9 108 aa9.01□□□□□ -0.97
GGA3-209ENST00000580646 PRAMEF27A3QJZ7 478 aa9.01□□□□□ -0.97
GGA3-209ENST00000580646 PINLYPA6NC86 204 aa9.01□□□□□ -0.97
GGA3-209ENST00000580646 LRRC3CA6NJW4 275 aa9.01□□□□□ -0.97
GGA3-209ENST00000580646 PRSS44E7EML9 344 aa9.01□□□□□ -0.97
GGA3-209ENST00000580646 SCDO00767 359 aa9.01□□□□□ -0.97
GGA3-209ENST00000580646 PRRG2O14669 202 aa9.01□□□□□ -0.97
GGA3-209ENST00000580646 CBR3O75828 277 aa9.01□□□□□ -0.97
GGA3-209ENST00000580646 KRT34O76011 436 aa9.01□□□□□ -0.97
GGA3-209ENST00000580646 C1QCP02747 245 aa9.01□□□□□ -0.97
GGA3-209ENST00000580646 TFPTP0C1Z6 253 aa9.01□□□□□ -0.97
GGA3-209ENST00000580646 ETFAP13804 333 aa9.01□□□□□ -0.97
GGA3-209ENST00000580646 HPGDP15428 266 aa9.01□□□□□ -0.97
GGA3-209ENST00000580646 PTGS2P35354 604 aa9.01□□□□□ -0.97
GGA3-209ENST00000580646 FBN2P35556 2912 aa9.01□□□□□ -0.97
GGA3-209ENST00000580646 CRISP3P54108 245 aa9.01□□□□□ -0.97
GGA3-209ENST00000580646 PPIAP62937 165 aaKnown RBP9.01□□□□□ -0.97
GGA3-209ENST00000580646 ADORA2A-AS1P86434 159 aa9.01□□□□□ -0.97
GGA3-209ENST00000580646 PLGLB1Q02325 96 aa9.01□□□□□ -0.97
GGA3-209ENST00000580646 RBBP4Q09028 425 aa9.01□□□□□ -0.97
GGA3-209ENST00000580646 C17orf67Q0P5P2 114 aa9.01□□□□□ -0.97
GGA3-209ENST00000580646 KRT72Q14CN4 511 aa9.01□□□□□ -0.97
GGA3-209ENST00000580646 ZNF141Q15928 474 aa9.01□□□□□ -0.97
GGA3-209ENST00000580646 FLYWCH1Q4VC44 716 aa9.01□□□□□ -0.97
GGA3-209ENST00000580646 LRRC23Q53EV4 343 aaPredicted RBP9.01□□□□□ -0.97
GGA3-209ENST00000580646 CMPK2Q5EBM0 449 aa9.01□□□□□ -0.97
GGA3-209ENST00000580646 CCNJQ5T5M9 372 aa9.01□□□□□ -0.97
GGA3-209ENST00000580646 FNDC7Q5VTL7 733 aa9.01□□□□□ -0.97
GGA3-209ENST00000580646 TIGD3Q6B0B8 471 aa9.01□□□□□ -0.97
GGA3-209ENST00000580646 DESI1Q6ICB0 168 aa9.01□□□□□ -0.97
GGA3-209ENST00000580646 NANOGP8Q6NSW7 305 aa9.01□□□□□ -0.97
GGA3-209ENST00000580646 C8orf82Q6P1X6 216 aaPredicted RBP9.01□□□□□ -0.97
GGA3-209ENST00000580646 XKRXQ6PP77 449 aa9.01□□□□□ -0.97
GGA3-209ENST00000580646 FRRS1Q6ZNA5 592 aa9.01□□□□□ -0.97
GGA3-209ENST00000580646 NET1Q7Z628 596 aaPredicted RBP9.01□□□□□ -0.97
GGA3-209ENST00000580646 SERPINA11Q86U17 422 aa9.01□□□□□ -0.97
GGA3-209ENST00000580646 DOLPP1Q86YN1 238 aa9.01□□□□□ -0.97
GGA3-209ENST00000580646 ZNF619Q8N2I2 560 aa9.01□□□□□ -0.97
GGA3-209ENST00000580646 FAM109AQ8N4B1 249 aa9.01□□□□□ -0.97
GGA3-209ENST00000580646 OR1J4Q8NGS1 313 aa9.01□□□□□ -0.97
GGA3-209ENST00000580646 OR4C3Q8NH37 302 aa9.01□□□□□ -0.97
GGA3-209ENST00000580646 PNPT1Q8TCS8 783 aaKnown RBP9.01□□□□□ -0.97
GGA3-209ENST00000580646 LZICQ8WZA0 190 aa9.01□□□□□ -0.97
GGA3-209ENST00000580646 RAB8BQ92930 207 aa9.01□□□□□ -0.97
GGA3-209ENST00000580646 RCN3Q96D15 328 aa9.01□□□□□ -0.97
GGA3-209ENST00000580646 OTUB1Q96FW1 271 aaPredicted RBP9.01□□□□□ -0.97
GGA3-209ENST00000580646 HOPXQ9BPY8 73 aaPredicted RBP9.01□□□□□ -0.97
GGA3-209ENST00000580646 TBL1XR1Q9BZK7 514 aa9.01□□□□□ -0.97
GGA3-209ENST00000580646 DEFB127Q9H1M4 99 aa9.01□□□□□ -0.97
GGA3-209ENST00000580646 UBQLN3Q9H347 655 aa9.01□□□□□ -0.97
GGA3-209ENST00000580646 ZNF703Q9H7S9 590 aaPredicted RBP9.01□□□□□ -0.97
GGA3-209ENST00000580646 KAT8Q9H7Z6 458 aaKnown RBP9.01□□□□□ -0.97
GGA3-209ENST00000580646 NANOGQ9H9S0 305 aa9.01□□□□□ -0.97
GGA3-209ENST00000580646 BCL2L10Q9HD36 194 aa9.01□□□□□ -0.97
GGA3-209ENST00000580646 PLSCR2Q9NRY7 297 aa9.01□□□□□ -0.97
GGA3-209ENST00000580646 FBXO34Q9NWN3 711 aa9.01□□□□□ -0.97
GGA3-209ENST00000580646 NIPSNAP3AQ9UFN0 247 aaPredicted RBP9.01□□□□□ -0.97
GGA3-209ENST00000580646 C15orf41Q9Y2V0 281 aa9.01□□□□□ -0.97
GGA3-209ENST00000580646 MEMO1Q9Y316 297 aa9.01□□□□□ -0.97
GGA3-209ENST00000580646 WDR45Q9Y484 360 aa9.01□□□□□ -0.97
GGA3-209ENST00000580646 DTNAQ9Y4J8 743 aa9.01□□□□□ -0.97
GGA3-209ENST00000580646 A0A0G2JMM0 328 aa9□□□□□ -0.97
GGA3-209ENST00000580646 A0A0G2JPF8 293 aa9□□□□□ -0.97
GGA3-209ENST00000580646 A0A1W2PPB8 328 aa9□□□□□ -0.97
GGA3-209ENST00000580646 A0A1W2PRS3 328 aa9□□□□□ -0.97
GGA3-209ENST00000580646 KIR3DP1A8MWS1 328 aa9□□□□□ -0.97
GGA3-209ENST00000580646 HNRNPCL2B2RXH8 293 aa9□□□□□ -0.97
GGA3-209ENST00000580646 HNRNPCL3B7ZW38 293 aa9□□□□□ -0.97
GGA3-209ENST00000580646 G3V3Y1 287 aa9□□□□□ -0.97
GGA3-209ENST00000580646 H3BNH8 94 aa9□□□□□ -0.97
GGA3-209ENST00000580646 CDC40O60508 579 aaKnown RBP eCLIP9□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms