RNA–Protein interactions for RNA: ENST00000580498.5

SMG8-204, Transcript of SMG8, nonsense mediated mRNA decay factor, humanhuman

TSL 5

Gene SMG8, Length 785 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG8-204ENST00000580498 SLC18A1P54219 525 aa18.18■□□□□ 0.5
SMG8-204ENST00000580498 DLX5P56178 289 aa18.18■□□□□ 0.5
SMG8-204ENST00000580498 HBA1P69905 142 aa18.18■□□□□ 0.5
SMG8-204ENST00000580498 LRRC74AQ0VAA2 488 aa18.18■□□□□ 0.5
SMG8-204ENST00000580498 CCNJQ5T5M9 372 aa18.18■□□□□ 0.5
SMG8-204ENST00000580498 GCNT2Q8N0V5 402 aa18.18■□□□□ 0.5
SMG8-204ENST00000580498 TRIML2Q8N7C3 387 aa18.18■□□□□ 0.5
SMG8-204ENST00000580498 ZNF614Q8N883 585 aa18.18■□□□□ 0.5
SMG8-204ENST00000580498 CNEP1R1Q8N9A8 125 aa18.18■□□□□ 0.5
SMG8-204ENST00000580498 MGARPQ8TDB4 240 aa18.18■□□□□ 0.5
SMG8-204ENST00000580498 OTUB1Q96FW1 271 aaPredicted RBP18.18■□□□□ 0.5
SMG8-204ENST00000580498 SH3YL1Q96HL8 342 aaPredicted RBP18.18■□□□□ 0.5
SMG8-204ENST00000580498 MEAF6Q9HAF1 191 aa18.18■□□□□ 0.5
SMG8-204ENST00000580498 FANCFQ9NPI8 374 aa18.18■□□□□ 0.5
SMG8-204ENST00000580498 DNAJB12Q9NXW2 375 aaKnown RBP18.18■□□□□ 0.5
SMG8-204ENST00000580498 MCTS1Q9ULC4 181 aaKnown RBP18.18■□□□□ 0.5
SMG8-204ENST00000580498 ADGRG4Q8IZF6 3080 aa18.17■□□□□ 0.5
SMG8-204ENST00000580498 PRSS51A0A1B0GVH4 220 aa18.17■□□□□ 0.5
SMG8-204ENST00000580498 GJE1A6NN92 205 aa18.17■□□□□ 0.5
SMG8-204ENST00000580498 SYNGR4O95473 234 aa18.17■□□□□ 0.5
SMG8-204ENST00000580498 PLGP00747 810 aaPredicted RBP18.17■□□□□ 0.5
SMG8-204ENST00000580498 MATN1P21941 496 aa18.17■□□□□ 0.5
SMG8-204ENST00000580498 S100A3P33764 101 aa18.17■□□□□ 0.5
SMG8-204ENST00000580498 SUMO3P55854 103 aaPredicted RBP18.17■□□□□ 0.5
SMG8-204ENST00000580498 MAGOHP61326 146 aaKnown RBP18.17■□□□□ 0.5
SMG8-204ENST00000580498 OR4F3Q6IEY1 312 aa18.17■□□□□ 0.5
SMG8-204ENST00000580498 C16orf62Q7Z3J2 963 aa18.17■□□□□ 0.5
SMG8-204ENST00000580498 SPATA19Q7Z5L4 167 aa18.17■□□□□ 0.5
SMG8-204ENST00000580498 LUZP2Q86TE4 346 aa18.17■□□□□ 0.5
SMG8-204ENST00000580498 OR5AK3PQ8NH89 298 aa18.17■□□□□ 0.5
SMG8-204ENST00000580498 TESCQ96BS2 214 aa18.17■□□□□ 0.5
SMG8-204ENST00000580498 OR7D2Q96RA2 312 aa18.17■□□□□ 0.5
SMG8-204ENST00000580498 SORT1Q99523 831 aa18.17■□□□□ 0.5
SMG8-204ENST00000580498 POLDIP3Q9BY77 421 aaKnown RBP18.17■□□□□ 0.5
SMG8-204ENST00000580498 ZNF395Q9H8N7 513 aaPredicted RBP18.17■□□□□ 0.5
SMG8-204ENST00000580498 CRIM1Q9NZV1 1036 aa18.17■□□□□ 0.5
SMG8-204ENST00000580498 NDRG3Q9UGV2 375 aa18.17■□□□□ 0.5
SMG8-204ENST00000580498 NUP214P35658 2090 aaPredicted RBP18.16■□□□□ 0.5
SMG8-204ENST00000580498 C7orf72A4D263 438 aa18.16■□□□□ 0.5
SMG8-204ENST00000580498 EIF1AYO14602 144 aaKnown RBP18.16■□□□□ 0.5
SMG8-204ENST00000580498 MSTNO14793 375 aa18.16■□□□□ 0.5
SMG8-204ENST00000580498 CASKO14936 926 aa18.16■□□□□ 0.5
SMG8-204ENST00000580498 HDAC3O15379 428 aa18.16■□□□□ 0.5
SMG8-204ENST00000580498 SMNDC1O75940 238 aaKnown RBP eCLIP18.16■□□□□ 0.5
SMG8-204ENST00000580498 CHI3L1P36222 383 aaPredicted RBP18.16■□□□□ 0.5
SMG8-204ENST00000580498 CPOXP36551 454 aa18.16■□□□□ 0.5
SMG8-204ENST00000580498 EIF1AXP47813 144 aaKnown RBP18.16■□□□□ 0.5
SMG8-204ENST00000580498 ATP12AP54707 1039 aa18.16■□□□□ 0.5
SMG8-204ENST00000580498 HPCAP84074 193 aa18.16■□□□□ 0.5
SMG8-204ENST00000580498 OGFOD2Q6N063 350 aa18.16■□□□□ 0.5
SMG8-204ENST00000580498 APOOLQ6UXV4 268 aa18.16■□□□□ 0.5
SMG8-204ENST00000580498 C6orf120Q7Z4R8 191 aa18.16■□□□□ 0.5
SMG8-204ENST00000580498 GTPBP8Q8N3Z3 284 aaPredicted RBP18.16■□□□□ 0.5
SMG8-204ENST00000580498 TMCO5AQ8N6Q1 288 aa18.16■□□□□ 0.5
SMG8-204ENST00000580498 OR5M1Q8NGP8 315 aa18.16■□□□□ 0.5
SMG8-204ENST00000580498 REXO5Q96IC2 774 aaKnown RBP18.16■□□□□ 0.5
SMG8-204ENST00000580498 SLC39A3Q9BRY0 314 aa18.16■□□□□ 0.5
SMG8-204ENST00000580498 RTN4RQ9BZR6 473 aa18.16■□□□□ 0.5
SMG8-204ENST00000580498 TIGARQ9NQ88 270 aa18.16■□□□□ 0.5
SMG8-204ENST00000580498 MED17Q9NVC6 651 aa18.16■□□□□ 0.5
SMG8-204ENST00000580498 GPATCH2Q9NW75 528 aa18.16■□□□□ 0.5
SMG8-204ENST00000580498 A0A1W2PNV4 684 aa18.15■□□□□ 0.5
SMG8-204ENST00000580498 C17orf51A8MQB3 221 aa18.15■□□□□ 0.5
SMG8-204ENST00000580498 E9PBE3 544 aa18.15■□□□□ 0.5
SMG8-204ENST00000580498 STX11O75558 287 aa18.15■□□□□ 0.5
SMG8-204ENST00000580498 CPSF4O95639 269 aaKnown RBP18.15■□□□□ 0.5
SMG8-204ENST00000580498 EPXP11678 715 aa18.15■□□□□ 0.5
SMG8-204ENST00000580498 UQCRC2P22695 453 aa18.15■□□□□ 0.5
SMG8-204ENST00000580498 CLDN15P56746 228 aa18.15■□□□□ 0.5
SMG8-204ENST00000580498 RAC1P63000 192 aa18.15■□□□□ 0.5
SMG8-204ENST00000580498 PON3Q15166 354 aa18.15■□□□□ 0.5
SMG8-204ENST00000580498 EXOSC6Q5RKV6 272 aaKnown RBP18.15■□□□□ 0.5
SMG8-204ENST00000580498 GTF2IRD2BQ6EKJ0 949 aa18.15■□□□□ 0.5
SMG8-204ENST00000580498 ESPNLQ6ZVH7 1005 aa18.15■□□□□ 0.5
SMG8-204ENST00000580498 GTF2IRD2Q86UP8 949 aa18.15■□□□□ 0.5
SMG8-204ENST00000580498 METTL25Q8N6Q8 603 aa18.15■□□□□ 0.5
SMG8-204ENST00000580498 GOLGA6L1Q8N7Z2 621 aa18.15■□□□□ 0.5
SMG8-204ENST00000580498 TOR1AIP2Q8NFQ8 470 aa18.15■□□□□ 0.5
SMG8-204ENST00000580498 ZBTB9Q96C00 473 aa18.15■□□□□ 0.5
SMG8-204ENST00000580498 ZNF845Q96IR2 970 aaPredicted RBP18.15■□□□□ 0.5
SMG8-204ENST00000580498 C20orf27Q9GZN8 174 aa18.15■□□□□ 0.5
SMG8-204ENST00000580498 CLEC4MQ9H2X3 399 aaPredicted RBP18.15■□□□□ 0.5
SMG8-204ENST00000580498 MANSC1Q9H8J5 431 aa18.15■□□□□ 0.5
SMG8-204ENST00000580498 PNPOQ9NVS9 261 aa18.15■□□□□ 0.5
SMG8-204ENST00000580498 JKAMPQ9P055 326 aa18.15■□□□□ 0.5
SMG8-204ENST00000580498 EMC9Q9Y3B6 208 aa18.15■□□□□ 0.5
SMG8-204ENST00000580498 DTNAQ9Y4J8 743 aa18.15■□□□□ 0.5
SMG8-204ENST00000580498 MED12LQ86YW9 2145 aa18.14■□□□□ 0.5
SMG8-204ENST00000580498 A6NNC1 897 aa18.14■□□□□ 0.49
SMG8-204ENST00000580498 TGM6O95932 706 aa18.14■□□□□ 0.49
SMG8-204ENST00000580498 PABPC4LP0CB38 370 aaKnown RBP18.14■□□□□ 0.49
SMG8-204ENST00000580498 ELK4P28324 431 aa18.14■□□□□ 0.49
SMG8-204ENST00000580498 KCNJ5P48544 419 aa18.14■□□□□ 0.49
SMG8-204ENST00000580498 KHKP50053 298 aa18.14■□□□□ 0.49
SMG8-204ENST00000580498 P2RX1P51575 399 aa18.14■□□□□ 0.49
SMG8-204ENST00000580498 CTBP2P56545 445 aa18.14■□□□□ 0.49
SMG8-204ENST00000580498 TXNL4AP83876 142 aaKnown RBP18.14■□□□□ 0.49
SMG8-204ENST00000580498 FOXF2Q12947 444 aa18.14■□□□□ 0.49
SMG8-204ENST00000580498 MPP2Q14168 576 aa18.14■□□□□ 0.49
SMG8-204ENST00000580498 PLPPR5Q32ZL2 321 aa18.14■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms