RNA–Protein interactions for RNA: ENST00000579122.1

CDKN2A-213, Transcript of cyclin dependent kinase inhibitor 2A, humanhuman

TSL 3 BASIC

Gene CDKN2A, Length 666 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN2A-213ENST00000579122 TRABD2AQ86V40 505 aa17.16■□□□□ 0.34
CDKN2A-213ENST00000579122 OR2V1Q8NHB1 315 aa17.16■□□□□ 0.34
CDKN2A-213ENST00000579122 ACTRT2Q8TDY3 377 aa17.16■□□□□ 0.34
CDKN2A-213ENST00000579122 PIK3R3Q92569 461 aa17.16■□□□□ 0.34
CDKN2A-213ENST00000579122 HOXB13Q92826 284 aaPredicted RBP17.16■□□□□ 0.34
CDKN2A-213ENST00000579122 ZBTB8AQ96BR9 441 aa17.16■□□□□ 0.34
CDKN2A-213ENST00000579122 POLR3HQ9Y535 204 aaPredicted RBP17.16■□□□□ 0.34
CDKN2A-213ENST00000579122 UBFD1O14562 309 aaKnown RBP17.15■□□□□ 0.34
CDKN2A-213ENST00000579122 NDUFB5O43674 189 aa17.15■□□□□ 0.34
CDKN2A-213ENST00000579122 NKX2-2O95096 273 aa17.15■□□□□ 0.34
CDKN2A-213ENST00000579122 PRPS2P11908 318 aa17.15■□□□□ 0.34
CDKN2A-213ENST00000579122 PSMA4P25789 261 aaKnown RBP17.15■□□□□ 0.34
CDKN2A-213ENST00000579122 RPS4XP62701 263 aaKnown RBP17.15■□□□□ 0.34
CDKN2A-213ENST00000579122 KRTAP1-1Q07627 177 aa17.15■□□□□ 0.34
CDKN2A-213ENST00000579122 HSP90B2PQ58FF3 399 aa17.15■□□□□ 0.34
CDKN2A-213ENST00000579122 TTMPQ5BVD1 217 aa17.15■□□□□ 0.34
CDKN2A-213ENST00000579122 CPTPQ5TA50 214 aa17.15■□□□□ 0.34
CDKN2A-213ENST00000579122 GTF2IRD2BQ6EKJ0 949 aa17.15■□□□□ 0.34
CDKN2A-213ENST00000579122 ADAM5Q6NVV9 412 aa17.15■□□□□ 0.34
CDKN2A-213ENST00000579122 NOXRED1Q6NXP6 359 aa17.15■□□□□ 0.34
CDKN2A-213ENST00000579122 GTF2IRD2Q86UP8 949 aa17.15■□□□□ 0.34
CDKN2A-213ENST00000579122 GPR151Q8TDV0 419 aa17.15■□□□□ 0.34
CDKN2A-213ENST00000579122 SLC9A6Q92581 669 aa17.15■□□□□ 0.34
CDKN2A-213ENST00000579122 AKAP1Q92667 903 aaKnown RBP eCLIP17.15■□□□□ 0.34
CDKN2A-213ENST00000579122 ATP6V1G3Q96LB4 118 aa17.15■□□□□ 0.34
CDKN2A-213ENST00000579122 MED4Q9NPJ6 270 aa17.15■□□□□ 0.34
CDKN2A-213ENST00000579122 EQTNQ9NQ60 294 aa17.15■□□□□ 0.34
CDKN2A-213ENST00000579122 LAMP3Q9UQV4 416 aa17.15■□□□□ 0.34
CDKN2A-213ENST00000579122 USF3Q68DE3 2245 aa17.15■□□□□ 0.34
CDKN2A-213ENST00000579122 STAB1Q9NY15 2570 aa17.14■□□□□ 0.33
CDKN2A-213ENST00000579122 A0A1W2PRB8 838 aa17.14■□□□□ 0.33
CDKN2A-213ENST00000579122 TNFSF11O14788 317 aa17.14■□□□□ 0.33
CDKN2A-213ENST00000579122 RSL1D1O76021 490 aaKnown RBP17.14■□□□□ 0.33
CDKN2A-213ENST00000579122 OXSR1O95747 527 aaPredicted RBP17.14■□□□□ 0.33
CDKN2A-213ENST00000579122 GSTA1P08263 222 aa17.14■□□□□ 0.33
CDKN2A-213ENST00000579122 ME2P23368 584 aa17.14■□□□□ 0.33
CDKN2A-213ENST00000579122 AGTR1P30556 359 aa17.14■□□□□ 0.33
CDKN2A-213ENST00000579122 ZNF41P51814 821 aaPredicted RBP17.14■□□□□ 0.33
CDKN2A-213ENST00000579122 ETFDHQ16134 617 aa17.14■□□□□ 0.33
CDKN2A-213ENST00000579122 PDSS1Q5T2R2 415 aa17.14■□□□□ 0.33
CDKN2A-213ENST00000579122 ZNF551Q7Z340 670 aaPredicted RBP17.14■□□□□ 0.33
CDKN2A-213ENST00000579122 EXOC3L1Q86VI1 746 aa17.14■□□□□ 0.33
CDKN2A-213ENST00000579122 CDRT4Q8N9R6 151 aa17.14■□□□□ 0.33
CDKN2A-213ENST00000579122 STEAP2Q8NFT2 490 aa17.14■□□□□ 0.33
CDKN2A-213ENST00000579122 OR4C3Q8NH37 302 aa17.14■□□□□ 0.33
CDKN2A-213ENST00000579122 TLCD1Q96CP7 247 aa17.14■□□□□ 0.33
CDKN2A-213ENST00000579122 METTL2AQ96IZ6 378 aaKnown RBP17.14■□□□□ 0.33
CDKN2A-213ENST00000579122 RNF145Q96MT1 663 aa17.14■□□□□ 0.33
CDKN2A-213ENST00000579122 NPAS1Q99742 590 aa17.14■□□□□ 0.33
CDKN2A-213ENST00000579122 TACO1Q9BSH4 297 aaKnown RBP17.14■□□□□ 0.33
CDKN2A-213ENST00000579122 HDHD5Q9BXW7 423 aa17.14■□□□□ 0.33
CDKN2A-213ENST00000579122 MED17Q9NVC6 651 aa17.14■□□□□ 0.33
CDKN2A-213ENST00000579122 CUBNO60494 3623 aa17.13■□□□□ 0.33
CDKN2A-213ENST00000579122 A0A0J9YW62 118 aa17.13■□□□□ 0.33
CDKN2A-213ENST00000579122 HMGB1P1B2RPK0 211 aaPredicted RBP17.13■□□□□ 0.33
CDKN2A-213ENST00000579122 H3BQF6 201 aa17.13■□□□□ 0.33
CDKN2A-213ENST00000579122 GOLGA8RI6L899 631 aa17.13■□□□□ 0.33
CDKN2A-213ENST00000579122 OVOL3O00110 214 aa17.13■□□□□ 0.33
CDKN2A-213ENST00000579122 OPN1LWP04000 364 aa17.13■□□□□ 0.33
CDKN2A-213ENST00000579122 PABPC4LP0CB38 370 aaKnown RBP17.13■□□□□ 0.33
CDKN2A-213ENST00000579122 PYGBP11216 843 aa17.13■□□□□ 0.33
CDKN2A-213ENST00000579122 NID1P14543 1247 aa17.13■□□□□ 0.33
CDKN2A-213ENST00000579122 MAGOHP61326 146 aaKnown RBP17.13■□□□□ 0.33
CDKN2A-213ENST00000579122 NAA20P61599 178 aa17.13■□□□□ 0.33
CDKN2A-213ENST00000579122 SLC18A2Q05940 514 aa17.13■□□□□ 0.33
CDKN2A-213ENST00000579122 DMTNQ08495 405 aa17.13■□□□□ 0.33
CDKN2A-213ENST00000579122 HSPB3Q12988 150 aa17.13■□□□□ 0.33
CDKN2A-213ENST00000579122 CLEC12BQ2HXU8 276 aa17.13■□□□□ 0.33
CDKN2A-213ENST00000579122 PLPPR5Q32ZL2 321 aa17.13■□□□□ 0.33
CDKN2A-213ENST00000579122 HBMQ6B0K9 141 aa17.13■□□□□ 0.33
CDKN2A-213ENST00000579122 HEPHL1Q6MZM0 1159 aa17.13■□□□□ 0.33
CDKN2A-213ENST00000579122 MFSD12Q6NUT3 480 aa17.13■□□□□ 0.33
CDKN2A-213ENST00000579122 MISPQ8IVT2 679 aa17.13■□□□□ 0.33
CDKN2A-213ENST00000579122 CCNYL1Q8N7R7 359 aa17.13■□□□□ 0.33
CDKN2A-213ENST00000579122 CEP70Q8NHQ1 597 aa17.13■□□□□ 0.33
CDKN2A-213ENST00000579122 FAM110BQ8TC76 370 aa17.13■□□□□ 0.33
CDKN2A-213ENST00000579122 ACMSDQ8TDX5 336 aa17.13■□□□□ 0.33
CDKN2A-213ENST00000579122 CCDC126Q96EE4 140 aa17.13■□□□□ 0.33
CDKN2A-213ENST00000579122 ZNF764Q96H86 408 aaPredicted RBP17.13■□□□□ 0.33
CDKN2A-213ENST00000579122 REPIN1Q9BWE0 567 aaKnown RBP17.13■□□□□ 0.33
CDKN2A-213ENST00000579122 IQCGQ9H095 443 aaKnown RBP17.13■□□□□ 0.33
CDKN2A-213ENST00000579122 C12orf49Q9H741 205 aa17.13■□□□□ 0.33
CDKN2A-213ENST00000579122 PDPK1O15530 556 aa17.12■□□□□ 0.33
CDKN2A-213ENST00000579122 KRT4P19013 534 aa17.12■□□□□ 0.33
CDKN2A-213ENST00000579122 LCN1P31025 176 aa17.12■□□□□ 0.33
CDKN2A-213ENST00000579122 GPC1P35052 558 aa17.12■□□□□ 0.33
CDKN2A-213ENST00000579122 C4orf33Q8N1A6 199 aa17.12■□□□□ 0.33
CDKN2A-213ENST00000579122 GATSQ8NAP1 163 aa17.12■□□□□ 0.33
CDKN2A-213ENST00000579122 OR6Y1Q8NGX8 325 aa17.12■□□□□ 0.33
CDKN2A-213ENST00000579122 LILRB1Q8NHL6 650 aaPredicted RBP17.12■□□□□ 0.33
CDKN2A-213ENST00000579122 RAB3IL1Q8TBN0 382 aa17.12■□□□□ 0.33
CDKN2A-213ENST00000579122 POC1BQ8TC44 478 aa17.12■□□□□ 0.33
CDKN2A-213ENST00000579122 OSTF1Q92882 214 aa17.12■□□□□ 0.33
CDKN2A-213ENST00000579122 S100PBPQ96BU1 408 aa17.12■□□□□ 0.33
CDKN2A-213ENST00000579122 TRMT61AQ96FX7 289 aaKnown RBP17.12■□□□□ 0.33
CDKN2A-213ENST00000579122 EGLN2Q96KS0 407 aa17.12■□□□□ 0.33
CDKN2A-213ENST00000579122 TMEM185BQ9H7F4 350 aa17.12■□□□□ 0.33
CDKN2A-213ENST00000579122 NTMQ9P121 344 aa17.12■□□□□ 0.33
CDKN2A-213ENST00000579122 RNF115Q9Y4L5 304 aa17.12■□□□□ 0.33
CDKN2A-213ENST00000579122 SNX8Q9Y5X2 465 aa17.12■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms