RNA–Protein interactions for RNA: ENST00000579061.5

SS18-212, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 3

Gene SS18, Length 646 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-212ENST00000579061 MARCOQ9UEW3 520 aaPredicted RBP13.41□□□□□ -0.26
SS18-212ENST00000579061 KCNN3Q9UGI6 736 aa13.41□□□□□ -0.26
SS18-212ENST00000579061 ZNF337Q9Y3M9 751 aa13.41□□□□□ -0.26
SS18-212ENST00000579061 GPR45Q9Y5Y3 372 aa13.41□□□□□ -0.26
SS18-212ENST00000579061 AP4B1Q9Y6B7 739 aa13.41□□□□□ -0.26
SS18-212ENST00000579061 KCNE3Q9Y6H6 103 aa13.41□□□□□ -0.26
SS18-212ENST00000579061 ANKHD1Q8IWZ3 2542 aaKnown RBP13.41□□□□□ -0.26
SS18-212ENST00000579061 RNF103-CHMP3A0A140T963 221 aa13.4□□□□□ -0.26
SS18-212ENST00000579061 TNFRSF21O75509 655 aa13.4□□□□□ -0.26
SS18-212ENST00000579061 GUSBP08236 651 aa13.4□□□□□ -0.26
SS18-212ENST00000579061 TMIGD3P0DMS9 266 aaPredicted RBP13.4□□□□□ -0.26
SS18-212ENST00000579061 IDO1P14902 403 aa13.4□□□□□ -0.26
SS18-212ENST00000579061 TCEA1P23193 301 aaKnown RBP13.4□□□□□ -0.26
SS18-212ENST00000579061 DGKQP52824 942 aa13.4□□□□□ -0.26
SS18-212ENST00000579061 DLX5P56178 289 aa13.4□□□□□ -0.26
SS18-212ENST00000579061 UFM1P61960 85 aa13.4□□□□□ -0.26
SS18-212ENST00000579061 FAM174BQ3ZCQ3 159 aa13.4□□□□□ -0.26
SS18-212ENST00000579061 KLHL26Q53HC5 615 aa13.4□□□□□ -0.26
SS18-212ENST00000579061 AP1ARQ63HQ0 302 aa13.4□□□□□ -0.26
SS18-212ENST00000579061 ARSKQ6UWY0 536 aa13.4□□□□□ -0.26
SS18-212ENST00000579061 CHMP1BQ7LBR1 199 aa13.4□□□□□ -0.26
SS18-212ENST00000579061 HDXQ7Z353 690 aa13.4□□□□□ -0.26
SS18-212ENST00000579061 GRAMD2AQ8IUY3 354 aa13.4□□□□□ -0.26
SS18-212ENST00000579061 B4GALNT2Q8NHY0 566 aa13.4□□□□□ -0.26
SS18-212ENST00000579061 OIT3Q8WWZ8 545 aa13.4□□□□□ -0.26
SS18-212ENST00000579061 RNASE6Q93091 150 aaKnown RBP13.4□□□□□ -0.26
SS18-212ENST00000579061 ZBTB8AQ96BR9 441 aa13.4□□□□□ -0.26
SS18-212ENST00000579061 TEX37Q96LM6 180 aa13.4□□□□□ -0.26
SS18-212ENST00000579061 SH3GL2Q99962 352 aa13.4□□□□□ -0.26
SS18-212ENST00000579061 SFXN3Q9BWM7 321 aa13.4□□□□□ -0.26
SS18-212ENST00000579061 SERHL2Q9H4I8 314 aa13.4□□□□□ -0.26
SS18-212ENST00000579061 VIPAS39Q9H9C1 493 aa13.4□□□□□ -0.26
SS18-212ENST00000579061 EXD2Q9NVH0 621 aa13.4□□□□□ -0.26
SS18-212ENST00000579061 HEATR5AQ86XA9 2040 aa13.4□□□□□ -0.26
SS18-212ENST00000579061 GOLGA8QA0A0J9YX86 632 aa13.39□□□□□ -0.27
SS18-212ENST00000579061 GOLGA8OA6NCC3 632 aa13.39□□□□□ -0.27
SS18-212ENST00000579061 GOLGA8NF8WBI6 632 aa13.39□□□□□ -0.27
SS18-212ENST00000579061 H3BNH8 94 aa13.39□□□□□ -0.27
SS18-212ENST00000579061 ZNF195O14628 629 aa13.39□□□□□ -0.27
SS18-212ENST00000579061 CPSF4O95639 269 aaKnown RBP13.39□□□□□ -0.27
SS18-212ENST00000579061 PGRP06401 933 aa13.39□□□□□ -0.27
SS18-212ENST00000579061 CRHP06850 196 aa13.39□□□□□ -0.27
SS18-212ENST00000579061 CAPN3P20807 821 aa13.39□□□□□ -0.27
SS18-212ENST00000579061 IL12AP29459 219 aa13.39□□□□□ -0.27
SS18-212ENST00000579061 SUMO3P55854 103 aaPredicted RBP13.39□□□□□ -0.27
SS18-212ENST00000579061 CLDN15P56746 228 aa13.39□□□□□ -0.27
SS18-212ENST00000579061 RPS3AP61247 264 aaKnown RBP13.39□□□□□ -0.27
SS18-212ENST00000579061 TXNL4AP83876 142 aaKnown RBP13.39□□□□□ -0.27
SS18-212ENST00000579061 TLE4Q04727 773 aa13.39□□□□□ -0.27
SS18-212ENST00000579061 CD226Q15762 336 aa13.39□□□□□ -0.27
SS18-212ENST00000579061 GSTA3Q16772 222 aa13.39□□□□□ -0.27
SS18-212ENST00000579061 PLPPR5Q32ZL2 321 aa13.39□□□□□ -0.27
SS18-212ENST00000579061 ARHGAP11BQ3KRB8 267 aa13.39□□□□□ -0.27
SS18-212ENST00000579061 FLYWCH1Q4VC44 716 aa13.39□□□□□ -0.27
SS18-212ENST00000579061 PDCD4Q53EL6 469 aaKnown RBP13.39□□□□□ -0.27
SS18-212ENST00000579061 SAXO2Q658L1 398 aa13.39□□□□□ -0.27
SS18-212ENST00000579061 ANKRD46Q86W74 232 aa13.39□□□□□ -0.27
SS18-212ENST00000579061 GTPBP8Q8N3Z3 284 aaPredicted RBP13.39□□□□□ -0.27
SS18-212ENST00000579061 METTL25Q8N6Q8 603 aa13.39□□□□□ -0.27
SS18-212ENST00000579061 GATSQ8NAP1 163 aa13.39□□□□□ -0.27
SS18-212ENST00000579061 OR5D16Q8NGK9 328 aa13.39□□□□□ -0.27
SS18-212ENST00000579061 PHOSPHO1Q8TCT1 267 aa13.39□□□□□ -0.27
SS18-212ENST00000579061 NEURL3Q96EH8 262 aa13.39□□□□□ -0.27
SS18-212ENST00000579061 C7orf26Q96N11 449 aa13.39□□□□□ -0.27
SS18-212ENST00000579061 ZBTB18Q99592 522 aa13.39□□□□□ -0.27
SS18-212ENST00000579061 NMUR2Q9GZQ4 415 aa13.39□□□□□ -0.27
SS18-212ENST00000579061 MCCC2Q9HCC0 563 aa13.39□□□□□ -0.27
SS18-212ENST00000579061 MED17Q9NVC6 651 aa13.39□□□□□ -0.27
SS18-212ENST00000579061 JKAMPQ9P055 326 aa13.39□□□□□ -0.27
SS18-212ENST00000579061 VDAC3Q9Y277 283 aa13.39□□□□□ -0.27
SS18-212ENST00000579061 L3MBTL1Q9Y468 752 aa13.39□□□□□ -0.27
SS18-212ENST00000579061 ZNF175Q9Y473 711 aa13.39□□□□□ -0.27
SS18-212ENST00000579061 DTNAQ9Y4J8 743 aa13.39□□□□□ -0.27
SS18-212ENST00000579061 MPDZO75970 2070 aa13.39□□□□□ -0.27
SS18-212ENST00000579061 TACC2O95359 2948 aa13.39□□□□□ -0.27
SS18-212ENST00000579061 HMGB1P1B2RPK0 211 aaPredicted RBP13.38□□□□□ -0.27
SS18-212ENST00000579061 H3BML4 177 aa13.38□□□□□ -0.27
SS18-212ENST00000579061 STX11O75558 287 aa13.38□□□□□ -0.27
SS18-212ENST00000579061 TGDSO95455 350 aa13.38□□□□□ -0.27
SS18-212ENST00000579061 H2AFXP16104 143 aaPredicted RBP13.38□□□□□ -0.27
SS18-212ENST00000579061 EIF1P41567 113 aaKnown RBP13.38□□□□□ -0.27
SS18-212ENST00000579061 P2RX1P51575 399 aa13.38□□□□□ -0.27
SS18-212ENST00000579061 ZNF41P51814 821 aaPredicted RBP13.38□□□□□ -0.27
SS18-212ENST00000579061 SUCLG1P53597 346 aaKnown RBP13.38□□□□□ -0.27
SS18-212ENST00000579061 RPS26P62854 115 aaKnown RBP13.38□□□□□ -0.27
SS18-212ENST00000579061 SLC9B1Q4ZJI4 515 aa13.38□□□□□ -0.27
SS18-212ENST00000579061 TTMPQ5BVD1 217 aa13.38□□□□□ -0.27
SS18-212ENST00000579061 NXNQ6DKJ4 435 aa13.38□□□□□ -0.27
SS18-212ENST00000579061 OR2A2Q6IF42 318 aa13.38□□□□□ -0.27
SS18-212ENST00000579061 HEPHL1Q6MZM0 1159 aa13.38□□□□□ -0.27
SS18-212ENST00000579061 MAVSQ7Z434 540 aa13.38□□□□□ -0.27
SS18-212ENST00000579061 UBQLNLQ8IYU4 475 aa13.38□□□□□ -0.27
SS18-212ENST00000579061 TRIML2Q8N7C3 387 aa13.38□□□□□ -0.27
SS18-212ENST00000579061 OR5M1Q8NGP8 315 aa13.38□□□□□ -0.27
SS18-212ENST00000579061 LURAP1Q96LR2 239 aa13.38□□□□□ -0.27
SS18-212ENST00000579061 OR52E6Q96RD3 313 aa13.38□□□□□ -0.27
SS18-212ENST00000579061 SLC35A5Q9BS91 424 aa13.38□□□□□ -0.27
SS18-212ENST00000579061 OR51I1Q9H343 314 aa13.38□□□□□ -0.27
SS18-212ENST00000579061 PIGMQ9H3S5 423 aa13.38□□□□□ -0.27
SS18-212ENST00000579061 POLE3Q9NRF9 147 aa13.38□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms