RNA–Protein interactions for RNA: ENST00000579040.5

SSH2-208, Transcript of slingshot protein phosphatase 2, humanhuman

TSL 1 (best)

Gene SSH2, Length 965 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH2-208ENST00000579040 NEUROD4Q9HD90 331 aa10.38□□□□□ -0.75
SSH2-208ENST00000579040 GIMAP2Q9UG22 337 aa10.38□□□□□ -0.75
SSH2-208ENST00000579040 EIF3LQ9Y262 564 aaKnown RBP10.38□□□□□ -0.75
SSH2-208ENST00000579040 VDAC3Q9Y277 283 aa10.38□□□□□ -0.75
SSH2-208ENST00000579040 FLNAP21333 2647 aaKnown RBP10.38□□□□□ -0.75
SSH2-208ENST00000579040 ARID1AO14497 2285 aa10.38□□□□□ -0.75
SSH2-208ENST00000579040 DSCAMO60469 2012 aa10.37□□□□□ -0.75
SSH2-208ENST00000579040 SKAP2O75563 359 aaPredicted RBP10.37□□□□□ -0.75
SSH2-208ENST00000579040 ATE1O95260 518 aa10.37□□□□□ -0.75
SSH2-208ENST00000579040 SLU7O95391 586 aaKnown RBP10.37□□□□□ -0.75
SSH2-208ENST00000579040 CGAP01215 116 aa10.37□□□□□ -0.75
SSH2-208ENST00000579040 CD99P14209 185 aa10.37□□□□□ -0.75
SSH2-208ENST00000579040 ATP6V1C1P21283 382 aa10.37□□□□□ -0.75
SSH2-208ENST00000579040 ARRB2P32121 409 aa10.37□□□□□ -0.75
SSH2-208ENST00000579040 CCT3P49368 545 aaKnown RBP10.37□□□□□ -0.75
SSH2-208ENST00000579040 RAC1P63000 192 aa10.37□□□□□ -0.75
SSH2-208ENST00000579040 PPP2R2AP63151 447 aa10.37□□□□□ -0.75
SSH2-208ENST00000579040 SIRPAP78324 504 aa10.37□□□□□ -0.75
SSH2-208ENST00000579040 FAM27E3Q08E93 113 aa10.37□□□□□ -0.75
SSH2-208ENST00000579040 KEAP1Q14145 624 aa10.37□□□□□ -0.75
SSH2-208ENST00000579040 LASP1Q14847 261 aaKnown RBP10.37□□□□□ -0.75
SSH2-208ENST00000579040 PTGR1Q14914 329 aa10.37□□□□□ -0.75
SSH2-208ENST00000579040 IL23RQ5VWK5 629 aa10.37□□□□□ -0.75
SSH2-208ENST00000579040 ZNF474Q6S9Z5 364 aaPredicted RBP10.37□□□□□ -0.75
SSH2-208ENST00000579040 FAM214BQ7L5A3 538 aa10.37□□□□□ -0.75
SSH2-208ENST00000579040 ZAR1Q86SH2 424 aa10.37□□□□□ -0.75
SSH2-208ENST00000579040 NUDCD3Q8IVD9 361 aa10.37□□□□□ -0.75
SSH2-208ENST00000579040 GATSQ8NAP1 163 aa10.37□□□□□ -0.75
SSH2-208ENST00000579040 ZNF527Q8NB42 609 aa10.37□□□□□ -0.75
SSH2-208ENST00000579040 TUBGCP3Q96CW5 907 aa10.37□□□□□ -0.75
SSH2-208ENST00000579040 C1orf50Q9BV19 199 aa10.37□□□□□ -0.75
SSH2-208ENST00000579040 BHLHE41Q9C0J9 482 aaPredicted RBP10.37□□□□□ -0.75
SSH2-208ENST00000579040 HOXD1Q9GZZ0 328 aa10.37□□□□□ -0.75
SSH2-208ENST00000579040 MED17Q9NVC6 651 aa10.37□□□□□ -0.75
SSH2-208ENST00000579040 ASIC5Q9NY37 505 aa10.37□□□□□ -0.75
SSH2-208ENST00000579040 ZNF226Q9NYT6 803 aa10.37□□□□□ -0.75
SSH2-208ENST00000579040 ZDHHC2Q9UIJ5 367 aa10.37□□□□□ -0.75
SSH2-208ENST00000579040 MCTS1Q9ULC4 181 aaKnown RBP10.37□□□□□ -0.75
SSH2-208ENST00000579040 FAF1Q9UNN5 650 aaPredicted RBP10.37□□□□□ -0.75
SSH2-208ENST00000579040 EMC9Q9Y3B6 208 aa10.37□□□□□ -0.75
SSH2-208ENST00000579040 SNX8Q9Y5X2 465 aa10.37□□□□□ -0.75
SSH2-208ENST00000579040 SHISA8B8ZZ34 492 aa10.36□□□□□ -0.75
SSH2-208ENST00000579040 C16orf97H3BN30 126 aa10.36□□□□□ -0.75
SSH2-208ENST00000579040 H3BNH8 94 aa10.36□□□□□ -0.75
SSH2-208ENST00000579040 EIF1AYO14602 144 aaKnown RBP10.36□□□□□ -0.75
SSH2-208ENST00000579040 ADAMDEC1O15204 470 aa10.36□□□□□ -0.75
SSH2-208ENST00000579040 CTIFO43310 598 aaKnown RBP10.36□□□□□ -0.75
SSH2-208ENST00000579040 GMFGO60234 142 aa10.36□□□□□ -0.75
SSH2-208ENST00000579040 AQP8O94778 261 aa10.36□□□□□ -0.75
SSH2-208ENST00000579040 SNUPNO95149 360 aaKnown RBP10.36□□□□□ -0.75
SSH2-208ENST00000579040 POU2F1P14859 743 aa10.36□□□□□ -0.75
SSH2-208ENST00000579040 CREB1P16220 341 aa10.36□□□□□ -0.75
SSH2-208ENST00000579040 KLK2P20151 261 aa10.36□□□□□ -0.75
SSH2-208ENST00000579040 ME2P23368 584 aa10.36□□□□□ -0.75
SSH2-208ENST00000579040 PSMA4P25789 261 aaKnown RBP10.36□□□□□ -0.75
SSH2-208ENST00000579040 ELK4P28324 431 aa10.36□□□□□ -0.75
SSH2-208ENST00000579040 UGT2B10P36537 528 aa10.36□□□□□ -0.75
SSH2-208ENST00000579040 EIF1P41567 113 aaKnown RBP10.36□□□□□ -0.75
SSH2-208ENST00000579040 EIF1AXP47813 144 aaKnown RBP10.36□□□□□ -0.75
SSH2-208ENST00000579040 SUMO3P55854 103 aaPredicted RBP10.36□□□□□ -0.75
SSH2-208ENST00000579040 TP53BP2Q13625 1128 aa10.36□□□□□ -0.75
SSH2-208ENST00000579040 CTU2Q2VPK5 515 aaKnown RBP10.36□□□□□ -0.75
SSH2-208ENST00000579040 DEFB113Q30KQ7 82 aa10.36□□□□□ -0.75
SSH2-208ENST00000579040 KRT71Q3SY84 523 aa10.36□□□□□ -0.75
SSH2-208ENST00000579040 SPDYE7PQ495Y7 208 aa10.36□□□□□ -0.75
SSH2-208ENST00000579040 PDSS1Q5T2R2 415 aa10.36□□□□□ -0.75
SSH2-208ENST00000579040 CCNJQ5T5M9 372 aa10.36□□□□□ -0.75
SSH2-208ENST00000579040 BHLHB9Q6PI77 547 aa10.36□□□□□ -0.75
SSH2-208ENST00000579040 ESPNLQ6ZVH7 1005 aa10.36□□□□□ -0.75
SSH2-208ENST00000579040 RIMKLAQ8IXN7 391 aa10.36□□□□□ -0.75
SSH2-208ENST00000579040 KIRREL3Q8IZU9 778 aa10.36□□□□□ -0.75
SSH2-208ENST00000579040 OR6K3Q8NGY3 331 aa10.36□□□□□ -0.75
SSH2-208ENST00000579040 OR10D3Q8NH80 312 aa10.36□□□□□ -0.75
SSH2-208ENST00000579040 B4GALNT2Q8NHY0 566 aa10.36□□□□□ -0.75
SSH2-208ENST00000579040 PPP1R14CQ8TAE6 165 aa10.36□□□□□ -0.75
SSH2-208ENST00000579040 ADAMTS15Q8TE58 950 aa10.36□□□□□ -0.75
SSH2-208ENST00000579040 CDS1Q92903 461 aa10.36□□□□□ -0.75
SSH2-208ENST00000579040 OTUB1Q96FW1 271 aaPredicted RBP10.36□□□□□ -0.75
SSH2-208ENST00000579040 CHMP6Q96FZ7 201 aa10.36□□□□□ -0.75
SSH2-208ENST00000579040 GMPPAQ96IJ6 420 aaPredicted RBP10.36□□□□□ -0.75
SSH2-208ENST00000579040 ADGRG7Q96K78 797 aa10.36□□□□□ -0.75
SSH2-208ENST00000579040 RNF145Q96MT1 663 aa10.36□□□□□ -0.75
SSH2-208ENST00000579040 MED18Q9BUE0 208 aa10.36□□□□□ -0.75
SSH2-208ENST00000579040 DUSP26Q9BV47 211 aa10.36□□□□□ -0.75
SSH2-208ENST00000579040 PRRG4Q9BZD6 226 aa10.36□□□□□ -0.75
SSH2-208ENST00000579040 OPN3Q9H1Y3 402 aaPredicted RBP10.36□□□□□ -0.75
SSH2-208ENST00000579040 CXorf36Q9H7Y0 433 aa10.36□□□□□ -0.75
SSH2-208ENST00000579040 SSU72Q9NP77 194 aaKnown RBP10.36□□□□□ -0.75
SSH2-208ENST00000579040 GLRX2Q9NS18 164 aa10.36□□□□□ -0.75
SSH2-208ENST00000579040 GPATCH2Q9NW75 528 aa10.36□□□□□ -0.75
SSH2-208ENST00000579040 FBXO34Q9NWN3 711 aa10.36□□□□□ -0.75
SSH2-208ENST00000579040 NOP53Q9NZM5 478 aaKnown RBP10.36□□□□□ -0.75
SSH2-208ENST00000579040 PROCRQ9UNN8 238 aa10.36□□□□□ -0.75
SSH2-208ENST00000579040 ACTL7BQ9Y614 415 aa10.36□□□□□ -0.75
SSH2-208ENST00000579040 ROS1P08922 2347 aa10.35□□□□□ -0.75
SSH2-208ENST00000579040 FREM1Q5H8C1 2179 aa10.35□□□□□ -0.75
SSH2-208ENST00000579040 RAI1Q7Z5J4 1906 aaPredicted RBP10.35□□□□□ -0.75
SSH2-208ENST00000579040 BIRC5O15392 142 aa10.35□□□□□ -0.75
SSH2-208ENST00000579040 SYNGR4O95473 234 aa10.35□□□□□ -0.75
SSH2-208ENST00000579040 C6orf47O95873 294 aa10.35□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms