RNA–Protein interactions for RNA: ENST00000578199.5

ERBB2-205, Transcript of erb-b2 receptor tyrosine kinase 2, humanhuman

TSL 1 (best) BASIC

Gene ERBB2, Length 2,526 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB2-205ENST00000578199 TWSG1Q9GZX9 223 aa16.3■□□□□ 0.2
ERBB2-205ENST00000578199 MIXL1Q9H2W2 232 aa16.3■□□□□ 0.2
ERBB2-205ENST00000578199 OR52D1Q9H346 318 aa16.3■□□□□ 0.2
ERBB2-205ENST00000578199 CMAHPQ9Y471 501 aa16.3■□□□□ 0.2
ERBB2-205ENST00000578199 A0A1W2PQL4 384 aaPredicted RBP16.3■□□□□ 0.2
ERBB2-205ENST00000578199 ATP1B1P05026 303 aa16.3■□□□□ 0.2
ERBB2-205ENST00000578199 ZNF10P21506 573 aaPredicted RBP16.3■□□□□ 0.2
ERBB2-205ENST00000578199 MRPS21P82921 87 aaKnown RBP16.3■□□□□ 0.2
ERBB2-205ENST00000578199 PLAURQ03405 335 aa16.3■□□□□ 0.2
ERBB2-205ENST00000578199 CSTF1Q05048 431 aaKnown RBP16.3■□□□□ 0.2
ERBB2-205ENST00000578199 MGAT2Q10469 447 aa16.3■□□□□ 0.2
ERBB2-205ENST00000578199 ZNF155Q12901 538 aaPredicted RBP16.3■□□□□ 0.2
ERBB2-205ENST00000578199 TPBGQ13641 420 aa16.3■□□□□ 0.2
ERBB2-205ENST00000578199 UTS2BQ765I0 119 aa16.3■□□□□ 0.2
ERBB2-205ENST00000578199 SIRT6Q8N6T7 355 aa16.3■□□□□ 0.2
ERBB2-205ENST00000578199 OR51G2Q8NGK0 314 aa16.3■□□□□ 0.2
ERBB2-205ENST00000578199 UFD1Q92890 307 aa16.3■□□□□ 0.2
ERBB2-205ENST00000578199 ART5Q96L15 291 aa16.3■□□□□ 0.2
ERBB2-205ENST00000578199 KCTD7Q96MP8 289 aa16.3■□□□□ 0.2
ERBB2-205ENST00000578199 NEDD4LQ96PU5 975 aa16.3■□□□□ 0.2
ERBB2-205ENST00000578199 ZNF649Q9BS31 505 aa16.3■□□□□ 0.2
ERBB2-205ENST00000578199 KATNB1Q9BVA0 655 aa16.3■□□□□ 0.2
ERBB2-205ENST00000578199 MARCH7Q9H992 704 aa16.3■□□□□ 0.2
ERBB2-205ENST00000578199 LYRM4Q9HD34 91 aa16.3■□□□□ 0.2
ERBB2-205ENST00000578199 EXOSC1Q9Y3B2 195 aaKnown RBP16.3■□□□□ 0.2
ERBB2-205ENST00000578199 CDH10Q9Y6N8 788 aa16.3■□□□□ 0.2
ERBB2-205ENST00000578199 DVL2O14641 736 aa16.29■□□□□ 0.2
ERBB2-205ENST00000578199 GALR3O60755 368 aaPredicted RBP16.29■□□□□ 0.2
ERBB2-205ENST00000578199 CDC123O75794 336 aaPredicted RBP16.29■□□□□ 0.2
ERBB2-205ENST00000578199 SNX4O95219 450 aa16.29■□□□□ 0.2
ERBB2-205ENST00000578199 IFI30P13284 250 aa16.29■□□□□ 0.2
ERBB2-205ENST00000578199 CELP19835 753 aa16.29■□□□□ 0.2
ERBB2-205ENST00000578199 YPEL5P62699 121 aa16.29■□□□□ 0.2
ERBB2-205ENST00000578199 TAB1Q15750 504 aa16.29■□□□□ 0.2
ERBB2-205ENST00000578199 RANBP3LQ86VV4 465 aaPredicted RBP16.29■□□□□ 0.2
ERBB2-205ENST00000578199 NLGN4YQ8NFZ3 816 aaPredicted RBP16.29■□□□□ 0.2
ERBB2-205ENST00000578199 GPBAR1Q8TDU6 330 aa16.29■□□□□ 0.2
ERBB2-205ENST00000578199 GRHL3Q8TE85 626 aa16.29■□□□□ 0.2
ERBB2-205ENST00000578199 SPRYD4Q8WW59 207 aaPredicted RBP16.29■□□□□ 0.2
ERBB2-205ENST00000578199 ISG20L2Q9H9L3 353 aaKnown RBP16.29■□□□□ 0.2
ERBB2-205ENST00000578199 SIDT1Q9NXL6 827 aaKnown RBP16.29■□□□□ 0.2
ERBB2-205ENST00000578199 CYP8B1Q9UNU6 501 aa16.29■□□□□ 0.2
ERBB2-205ENST00000578199 LRP4O75096 1905 aa16.29■□□□□ 0.2
ERBB2-205ENST00000578199 TRAPPC13A5PLN9 417 aa16.29■□□□□ 0.2
ERBB2-205ENST00000578199 CDHR4A6H8M9 788 aa16.29■□□□□ 0.2
ERBB2-205ENST00000578199 STK25O00506 426 aa16.29■□□□□ 0.2
ERBB2-205ENST00000578199 SLC30A4O14863 429 aa16.29■□□□□ 0.2
ERBB2-205ENST00000578199 NCR1O76036 304 aa16.29■□□□□ 0.2
ERBB2-205ENST00000578199 ST6GAL1P15907 406 aa16.29■□□□□ 0.2
ERBB2-205ENST00000578199 SSTR4P31391 388 aa16.29■□□□□ 0.2
ERBB2-205ENST00000578199 EIF2B5Q13144 721 aaKnown RBP16.29■□□□□ 0.2
ERBB2-205ENST00000578199 NRARPQ7Z6K4 114 aa16.29■□□□□ 0.2
ERBB2-205ENST00000578199 OR4N2Q8NGD1 307 aa16.29■□□□□ 0.2
ERBB2-205ENST00000578199 RFKQ969G6 155 aa16.29■□□□□ 0.2
ERBB2-205ENST00000578199 ANKRD9Q96BM1 317 aaPredicted RBP16.29■□□□□ 0.2
ERBB2-205ENST00000578199 ITPKCQ96DU7 683 aa16.29■□□□□ 0.2
ERBB2-205ENST00000578199 PRRG3Q9BZD7 231 aa16.29■□□□□ 0.2
ERBB2-205ENST00000578199 H2AFY2Q9P0M6 372 aaPredicted RBP16.29■□□□□ 0.2
ERBB2-205ENST00000578199 A0A0J9YY10 115 aa16.28■□□□□ 0.2
ERBB2-205ENST00000578199 UNC119BA6NIH7 251 aa16.28■□□□□ 0.2
ERBB2-205ENST00000578199 HRKO00198 91 aa16.28■□□□□ 0.2
ERBB2-205ENST00000578199 IL1AP01583 271 aa16.28■□□□□ 0.2
ERBB2-205ENST00000578199 DBIP07108 87 aaKnown RBP16.28■□□□□ 0.2
ERBB2-205ENST00000578199 THBS1P07996 1170 aa16.28■□□□□ 0.2
ERBB2-205ENST00000578199 NID1P14543 1247 aa16.28■□□□□ 0.2
ERBB2-205ENST00000578199 DEFA1P59665 94 aa16.28■□□□□ 0.2
ERBB2-205ENST00000578199 DEFA3P59666 94 aa16.28■□□□□ 0.2
ERBB2-205ENST00000578199 UBE2IP63279 158 aaKnown RBP16.28■□□□□ 0.2
ERBB2-205ENST00000578199 LRIT3Q3SXY7 679 aa16.28■□□□□ 0.2
ERBB2-205ENST00000578199 QSOX2Q6ZRP7 698 aa16.28■□□□□ 0.2
ERBB2-205ENST00000578199 Q6ZS52 159 aa16.28■□□□□ 0.2
ERBB2-205ENST00000578199 CXXC5Q7LFL8 322 aaKnown RBP16.28■□□□□ 0.2
ERBB2-205ENST00000578199 CDRT4Q8N9R6 151 aa16.28■□□□□ 0.2
ERBB2-205ENST00000578199 OR52R1Q8NGF1 315 aa16.28■□□□□ 0.2
ERBB2-205ENST00000578199 SMAP2Q8WU79 429 aaPredicted RBP16.28■□□□□ 0.2
ERBB2-205ENST00000578199 TMEM239Q8WW34 195 aa16.28■□□□□ 0.2
ERBB2-205ENST00000578199 PTCHD1Q96NR3 888 aa16.28■□□□□ 0.2
ERBB2-205ENST00000578199 CCDC3Q9BQI4 270 aa16.28■□□□□ 0.2
ERBB2-205ENST00000578199 ZNF223Q9UK11 482 aaPredicted RBP16.28■□□□□ 0.2
ERBB2-205ENST00000578199 PLOD3O60568 738 aa16.28■□□□□ 0.2
ERBB2-205ENST00000578199 ADAM11O75078 769 aa16.28■□□□□ 0.2
ERBB2-205ENST00000578199 RFPL3O75679 317 aa16.28■□□□□ 0.2
ERBB2-205ENST00000578199 FZD5Q13467 585 aa16.28■□□□□ 0.2
ERBB2-205ENST00000578199 ERV3-1Q14264 604 aa16.28■□□□□ 0.2
ERBB2-205ENST00000578199 EIPR1Q53HC9 387 aa16.28■□□□□ 0.2
ERBB2-205ENST00000578199 NXNL2Q5VZ03 156 aa16.28■□□□□ 0.2
ERBB2-205ENST00000578199 FAM131AQ6UXB0 335 aa16.28■□□□□ 0.2
ERBB2-205ENST00000578199 THSD4Q6ZMP0 1018 aa16.28■□□□□ 0.2
ERBB2-205ENST00000578199 KLBQ86Z14 1044 aa16.28■□□□□ 0.2
ERBB2-205ENST00000578199 CCDC32Q9BV29 185 aa16.28■□□□□ 0.2
ERBB2-205ENST00000578199 C2orf42Q9NWW7 574 aa16.28■□□□□ 0.2
ERBB2-205ENST00000578199 USP36Q9P275 1121 aaKnown RBP16.28■□□□□ 0.2
ERBB2-205ENST00000578199 NDRG2Q9UN36 371 aaKnown RBP16.28■□□□□ 0.2
ERBB2-205ENST00000578199 SPACA6W5XKT8 324 aa16.28■□□□□ 0.2
ERBB2-205ENST00000578199 IQCMA0A1B0GVH7 501 aa16.27■□□□□ 0.2
ERBB2-205ENST00000578199 C2orf92A0A1B0GVN3 265 aa16.27■□□□□ 0.2
ERBB2-205ENST00000578199 SHISA3A0PJX4 238 aa16.27■□□□□ 0.2
ERBB2-205ENST00000578199 LYPD3O95274 346 aa16.27■□□□□ 0.2
ERBB2-205ENST00000578199 RPS4Y1P22090 263 aaKnown RBP16.27■□□□□ 0.2
ERBB2-205ENST00000578199 TMED10P49755 219 aaKnown RBP16.27■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms