RNA–Protein interactions for RNA: ENST00000577435.5

GGA3-203, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 4

Gene GGA3, Length 547 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-203ENST00000577435 ZNF629Q9UEG4 869 aaPredicted RBP12.64□□□□□ -0.39
GGA3-203ENST00000577435 RPH3AQ9Y2J0 694 aaPredicted RBP12.64□□□□□ -0.39
GGA3-203ENST00000577435 MPDZO75970 2070 aa12.63□□□□□ -0.39
GGA3-203ENST00000577435 OR2M5A3KFT3 312 aa12.63□□□□□ -0.39
GGA3-203ENST00000577435 CCDC154A6NI56 674 aa12.63□□□□□ -0.39
GGA3-203ENST00000577435 KDM4EB2RXH2 506 aaPredicted RBP12.63□□□□□ -0.39
GGA3-203ENST00000577435 DIAPH2O60879 1101 aa12.63□□□□□ -0.39
GGA3-203ENST00000577435 IGFBP2P18065 325 aa12.63□□□□□ -0.39
GGA3-203ENST00000577435 IDH3AP50213 366 aa12.63□□□□□ -0.39
GGA3-203ENST00000577435 RPS26P62854 115 aaKnown RBP12.63□□□□□ -0.39
GGA3-203ENST00000577435 CD226Q15762 336 aa12.63□□□□□ -0.39
GGA3-203ENST00000577435 ARHGAP11BQ3KRB8 267 aa12.63□□□□□ -0.39
GGA3-203ENST00000577435 POMZP3Q6PJE2 187 aa12.63□□□□□ -0.39
GGA3-203ENST00000577435 MSANTD1Q6ZTZ1 278 aa12.63□□□□□ -0.39
GGA3-203ENST00000577435 LIX1LQ8IVB5 337 aa12.63□□□□□ -0.39
GGA3-203ENST00000577435 TRIML2Q8N7C3 387 aa12.63□□□□□ -0.39
GGA3-203ENST00000577435 TNIP2Q8NFZ5 429 aa12.63□□□□□ -0.39
GGA3-203ENST00000577435 OIT3Q8WWZ8 545 aa12.63□□□□□ -0.39
GGA3-203ENST00000577435 STON2Q8WXE9 905 aa12.63□□□□□ -0.39
GGA3-203ENST00000577435 WNT2BQ93097 391 aa12.63□□□□□ -0.39
GGA3-203ENST00000577435 MAGEB18Q96M61 343 aa12.63□□□□□ -0.39
GGA3-203ENST00000577435 PANX1Q96RD7 426 aa12.63□□□□□ -0.39
GGA3-203ENST00000577435 TRIB1Q96RU8 372 aa12.63□□□□□ -0.39
GGA3-203ENST00000577435 TUBA1CQ9BQE3 449 aa12.63□□□□□ -0.39
GGA3-203ENST00000577435 SLC35A5Q9BS91 424 aa12.63□□□□□ -0.39
GGA3-203ENST00000577435 CCDC28BQ9BUN5 200 aa12.63□□□□□ -0.39
GGA3-203ENST00000577435 SAP130Q9H0E3 1048 aa12.63□□□□□ -0.39
GGA3-203ENST00000577435 OR51I1Q9H343 314 aa12.63□□□□□ -0.39
GGA3-203ENST00000577435 TCF7L2Q9NQB0 619 aa12.63□□□□□ -0.39
GGA3-203ENST00000577435 EXD2Q9NVH0 621 aa12.63□□□□□ -0.39
GGA3-203ENST00000577435 ZNF337Q9Y3M9 751 aa12.63□□□□□ -0.39
GGA3-203ENST00000577435 DTNAQ9Y4J8 743 aa12.63□□□□□ -0.39
GGA3-203ENST00000577435 AP4B1Q9Y6B7 739 aa12.63□□□□□ -0.39
GGA3-203ENST00000577435 C7orf72A4D263 438 aa12.62□□□□□ -0.39
GGA3-203ENST00000577435 NKX2-6A6NCS4 301 aa12.62□□□□□ -0.39
GGA3-203ENST00000577435 C9JVG2 144 aa12.62□□□□□ -0.39
GGA3-203ENST00000577435 H0Y3Z8 333 aa12.62□□□□□ -0.39
GGA3-203ENST00000577435 H3BNH8 94 aa12.62□□□□□ -0.39
GGA3-203ENST00000577435 HCRTR2O43614 444 aa12.62□□□□□ -0.39
GGA3-203ENST00000577435 STX11O75558 287 aa12.62□□□□□ -0.39
GGA3-203ENST00000577435 IL18BPO95998 194 aa12.62□□□□□ -0.39
GGA3-203ENST00000577435 ZCCHC18P0CG32 403 aa12.62□□□□□ -0.39
GGA3-203ENST00000577435 COX6B1P14854 86 aa12.62□□□□□ -0.39
GGA3-203ENST00000577435 ZNF17P17021 662 aa12.62□□□□□ -0.39
GGA3-203ENST00000577435 MAGEA8P43361 318 aa12.62□□□□□ -0.39
GGA3-203ENST00000577435 EEFSECP57772 596 aaKnown RBP12.62□□□□□ -0.39
GGA3-203ENST00000577435 IRX1P78414 480 aaPredicted RBP12.62□□□□□ -0.39
GGA3-203ENST00000577435 SRYQ05066 204 aa12.62□□□□□ -0.39
GGA3-203ENST00000577435 ZNF141Q15928 474 aa12.62□□□□□ -0.39
GGA3-203ENST00000577435 FLYWCH1Q4VC44 716 aa12.62□□□□□ -0.39
GGA3-203ENST00000577435 RAET1LQ5VY80 246 aa12.62□□□□□ -0.39
GGA3-203ENST00000577435 ARSKQ6UWY0 536 aa12.62□□□□□ -0.39
GGA3-203ENST00000577435 GTPBP8Q8N3Z3 284 aaPredicted RBP12.62□□□□□ -0.39
GGA3-203ENST00000577435 NAXEQ8NCW5 288 aa12.62□□□□□ -0.39
GGA3-203ENST00000577435 B4GALNT2Q8NHY0 566 aa12.62□□□□□ -0.39
GGA3-203ENST00000577435 ZFP3Q96NJ6 502 aa12.62□□□□□ -0.39
GGA3-203ENST00000577435 TM9SF2Q99805 663 aa12.62□□□□□ -0.39
GGA3-203ENST00000577435 INPP5KQ9BT40 448 aa12.62□□□□□ -0.39
GGA3-203ENST00000577435 ZNF350Q9GZX5 532 aa12.62□□□□□ -0.39
GGA3-203ENST00000577435 ACBD3Q9H3P7 528 aa12.62□□□□□ -0.39
GGA3-203ENST00000577435 POLE3Q9NRF9 147 aa12.62□□□□□ -0.39
GGA3-203ENST00000577435 TMEM45AQ9NWC5 275 aa12.62□□□□□ -0.39
GGA3-203ENST00000577435 ANKHD1Q8IWZ3 2542 aaKnown RBP12.62□□□□□ -0.39
GGA3-203ENST00000577435 CREBBPQ92793 2442 aa12.62□□□□□ -0.39
GGA3-203ENST00000577435 TACC2O95359 2948 aa12.61□□□□□ -0.39
GGA3-203ENST00000577435 FAM234BA2RU67 622 aa12.61□□□□□ -0.39
GGA3-203ENST00000577435 FAM90A27PA6NNH2 459 aa12.61□□□□□ -0.39
GGA3-203ENST00000577435 CLCA1A8K7I4 914 aa12.61□□□□□ -0.39
GGA3-203ENST00000577435 DVL2O14641 736 aa12.61□□□□□ -0.39
GGA3-203ENST00000577435 POLR3GO15318 223 aaPredicted RBP12.61□□□□□ -0.39
GGA3-203ENST00000577435 FCMRO60667 390 aa12.61□□□□□ -0.39
GGA3-203ENST00000577435 TNFRSF21O75509 655 aa12.61□□□□□ -0.39
GGA3-203ENST00000577435 RCBTB2O95199 551 aa12.61□□□□□ -0.39
GGA3-203ENST00000577435 OR12D1P0DN82 309 aa12.61□□□□□ -0.39
GGA3-203ENST00000577435 CTSSP25774 331 aa12.61□□□□□ -0.39
GGA3-203ENST00000577435 PSMA4P25789 261 aaKnown RBP12.61□□□□□ -0.39
GGA3-203ENST00000577435 CHI3L1P36222 383 aaPredicted RBP12.61□□□□□ -0.39
GGA3-203ENST00000577435 POLR2JP52435 117 aaKnown RBP12.61□□□□□ -0.39
GGA3-203ENST00000577435 ZNF136P52737 540 aa12.61□□□□□ -0.39
GGA3-203ENST00000577435 SUMO3P55854 103 aaPredicted RBP12.61□□□□□ -0.39
GGA3-203ENST00000577435 CLDN15P56746 228 aa12.61□□□□□ -0.39
GGA3-203ENST00000577435 DDX59Q5T1V6 619 aaKnown RBP eCLIP12.61□□□□□ -0.39
GGA3-203ENST00000577435 ATAD3BQ5T9A4 648 aa12.61□□□□□ -0.39
GGA3-203ENST00000577435 ZNF621Q6ZSS3 439 aa12.61□□□□□ -0.39
GGA3-203ENST00000577435 MIER2Q8N344 545 aa12.61□□□□□ -0.39
GGA3-203ENST00000577435 MEIOBQ8N635 442 aa12.61□□□□□ -0.39
GGA3-203ENST00000577435 GATSQ8NAP1 163 aa12.61□□□□□ -0.39
GGA3-203ENST00000577435 PHOSPHO1Q8TCT1 267 aa12.61□□□□□ -0.39
GGA3-203ENST00000577435 XAGE5Q8WWM1 108 aa12.61□□□□□ -0.39
GGA3-203ENST00000577435 ZBTB8AQ96BR9 441 aa12.61□□□□□ -0.39
GGA3-203ENST00000577435 NPDC1Q9NQX5 325 aaPredicted RBP12.61□□□□□ -0.39
GGA3-203ENST00000577435 MED17Q9NVC6 651 aa12.61□□□□□ -0.39
GGA3-203ENST00000577435 CLCF1Q9UBD9 225 aa12.61□□□□□ -0.39
GGA3-203ENST00000577435 STOML1Q9UBI4 398 aa12.61□□□□□ -0.39
GGA3-203ENST00000577435 ICAM5Q9UMF0 924 aa12.61□□□□□ -0.39
GGA3-203ENST00000577435 LRBAP50851 2863 aa12.61□□□□□ -0.39
GGA3-203ENST00000577435 NPIPA5A0A0B4J1W7 369 aa12.6□□□□□ -0.39
GGA3-203ENST00000577435 NPIPA7E9PJI5 369 aa12.6□□□□□ -0.39
GGA3-203ENST00000577435 SYT5O00445 386 aa12.6□□□□□ -0.39
GGA3-203ENST00000577435 HMGN4O00479 90 aa12.6□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms