RNA–Protein interactions for RNA: ENST00000576613.5

CTDNEP1-212, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 3

Gene CTDNEP1, Length 606 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-212ENST00000576613 LILRA2Q8N149 483 aa10.36□□□□□ -0.75
CTDNEP1-212ENST00000576613 ZNF619Q8N2I2 560 aa10.36□□□□□ -0.75
CTDNEP1-212ENST00000576613 PIWIL2Q8TC59 973 aaKnown RBP10.36□□□□□ -0.75
CTDNEP1-212ENST00000576613 ABHD3Q8WU67 409 aa10.36□□□□□ -0.75
CTDNEP1-212ENST00000576613 PIK3R3Q92569 461 aa10.36□□□□□ -0.75
CTDNEP1-212ENST00000576613 OSTF1Q92882 214 aa10.36□□□□□ -0.75
CTDNEP1-212ENST00000576613 NEUROG1Q92886 237 aa10.36□□□□□ -0.75
CTDNEP1-212ENST00000576613 AMDHD1Q96NU7 426 aa10.36□□□□□ -0.75
CTDNEP1-212ENST00000576613 PAFAH2Q99487 392 aa10.36□□□□□ -0.75
CTDNEP1-212ENST00000576613 TRAF4Q9BUZ4 470 aaPredicted RBP10.36□□□□□ -0.75
CTDNEP1-212ENST00000576613 TRIM2Q9C040 744 aa10.36□□□□□ -0.75
CTDNEP1-212ENST00000576613 AMBRA1Q9C0C7 1298 aa10.36□□□□□ -0.75
CTDNEP1-212ENST00000576613 GRIP2Q9C0E4 1043 aa10.36□□□□□ -0.75
CTDNEP1-212ENST00000576613 IQCGQ9H095 443 aaKnown RBP10.36□□□□□ -0.75
CTDNEP1-212ENST00000576613 GLIPR2Q9H4G4 154 aa10.36□□□□□ -0.75
CTDNEP1-212ENST00000576613 MYNNQ9NPC7 610 aa10.36□□□□□ -0.75
CTDNEP1-212ENST00000576613 EQTNQ9NQ60 294 aa10.36□□□□□ -0.75
CTDNEP1-212ENST00000576613 MED17Q9NVC6 651 aa10.36□□□□□ -0.75
CTDNEP1-212ENST00000576613 SIRT5Q9NXA8 310 aa10.36□□□□□ -0.75
CTDNEP1-212ENST00000576613 NINJ2Q9NZG7 142 aa10.36□□□□□ -0.75
CTDNEP1-212ENST00000576613 KLHL13Q9P2N7 655 aa10.36□□□□□ -0.75
CTDNEP1-212ENST00000576613 GDF2Q9UK05 429 aaPredicted RBP10.36□□□□□ -0.75
CTDNEP1-212ENST00000576613 WBP11Q9Y2W2 641 aaKnown RBP10.36□□□□□ -0.75
CTDNEP1-212ENST00000576613 GXYLT2A0PJZ3 443 aa10.35□□□□□ -0.75
CTDNEP1-212ENST00000576613 GJE1A6NN92 205 aa10.35□□□□□ -0.75
CTDNEP1-212ENST00000576613 TRIM49D1C9J1S8 452 aa10.35□□□□□ -0.75
CTDNEP1-212ENST00000576613 SSX4O60224 188 aa10.35□□□□□ -0.75
CTDNEP1-212ENST00000576613 NDUFS7O75251 213 aa10.35□□□□□ -0.75
CTDNEP1-212ENST00000576613 IGKV1D-16P01601 117 aa10.35□□□□□ -0.75
CTDNEP1-212ENST00000576613 SBK3P0C264 359 aa10.35□□□□□ -0.75
CTDNEP1-212ENST00000576613 ELK4P28324 431 aa10.35□□□□□ -0.75
CTDNEP1-212ENST00000576613 SFTPDP35247 375 aa10.35□□□□□ -0.75
CTDNEP1-212ENST00000576613 EIF1P41567 113 aaKnown RBP10.35□□□□□ -0.75
CTDNEP1-212ENST00000576613 HTR6P50406 440 aa10.35□□□□□ -0.75
CTDNEP1-212ENST00000576613 NUDT6P53370 316 aa10.35□□□□□ -0.75
CTDNEP1-212ENST00000576613 PKNOX1P55347 436 aa10.35□□□□□ -0.75
CTDNEP1-212ENST00000576613 DSCR9P59020 149 aa10.35□□□□□ -0.75
CTDNEP1-212ENST00000576613 LCP2Q13094 533 aa10.35□□□□□ -0.75
CTDNEP1-212ENST00000576613 ITGADQ13349 1161 aa10.35□□□□□ -0.75
CTDNEP1-212ENST00000576613 TSC22D1Q15714 1073 aa10.35□□□□□ -0.75
CTDNEP1-212ENST00000576613 IMPG1Q17R60 797 aa10.35□□□□□ -0.75
CTDNEP1-212ENST00000576613 UNC50Q53HI1 259 aa10.35□□□□□ -0.75
CTDNEP1-212ENST00000576613 AGAP6Q5VW22 663 aa10.35□□□□□ -0.75
CTDNEP1-212ENST00000576613 FAM71E1Q6IPT2 247 aa10.35□□□□□ -0.75
CTDNEP1-212ENST00000576613 CLEC2AQ6UVW9 174 aa10.35□□□□□ -0.75
CTDNEP1-212ENST00000576613 IKBIPQ70UQ0 350 aa10.35□□□□□ -0.75
CTDNEP1-212ENST00000576613 SSX8Q7RTT4 187 aa10.35□□□□□ -0.75
CTDNEP1-212ENST00000576613 DTX2Q86UW9 622 aa10.35□□□□□ -0.75
CTDNEP1-212ENST00000576613 TDRPQ86YL5 185 aa10.35□□□□□ -0.75
CTDNEP1-212ENST00000576613 TMEM151AQ8N4L1 468 aa10.35□□□□□ -0.75
CTDNEP1-212ENST00000576613 CDRT4Q8N9R6 151 aa10.35□□□□□ -0.75
CTDNEP1-212ENST00000576613 GATSQ8NAP1 163 aa10.35□□□□□ -0.75
CTDNEP1-212ENST00000576613 OR4C3Q8NH37 302 aa10.35□□□□□ -0.75
CTDNEP1-212ENST00000576613 ROBO4Q8WZ75 1007 aa10.35□□□□□ -0.75
CTDNEP1-212ENST00000576613 SH3YL1Q96HL8 342 aaPredicted RBP10.35□□□□□ -0.75
CTDNEP1-212ENST00000576613 ADAD1Q96M93 576 aaKnown RBP10.35□□□□□ -0.75
CTDNEP1-212ENST00000576613 TMEM237Q96Q45 408 aa10.35□□□□□ -0.75
CTDNEP1-212ENST00000576613 BEX2Q9BXY8 128 aa10.35□□□□□ -0.75
CTDNEP1-212ENST00000576613 FUT8Q9BYC5 575 aa10.35□□□□□ -0.75
CTDNEP1-212ENST00000576613 L2HGDHQ9H9P8 463 aa10.35□□□□□ -0.75
CTDNEP1-212ENST00000576613 CISD1Q9NZ45 108 aaKnown RBP10.35□□□□□ -0.75
CTDNEP1-212ENST00000576613 LPAR3Q9UBY5 353 aa10.35□□□□□ -0.75
CTDNEP1-212ENST00000576613 PRR14LQ5THK1 2151 aa10.35□□□□□ -0.75
CTDNEP1-212ENST00000576613 IGHV4-30-2A0A087WSY4 118 aa10.34□□□□□ -0.75
CTDNEP1-212ENST00000576613 ESYT3A0FGR9 886 aa10.34□□□□□ -0.75
CTDNEP1-212ENST00000576613 SERTM1A2A2V5 107 aa10.34□□□□□ -0.75
CTDNEP1-212ENST00000576613 SCDO00767 359 aa10.34□□□□□ -0.75
CTDNEP1-212ENST00000576613 PRKD3O94806 890 aa10.34□□□□□ -0.75
CTDNEP1-212ENST00000576613 NKX2-2O95096 273 aa10.34□□□□□ -0.75
CTDNEP1-212ENST00000576613 ADAP00813 363 aa10.34□□□□□ -0.75
CTDNEP1-212ENST00000576613 YES1P07947 543 aa10.34□□□□□ -0.75
CTDNEP1-212ENST00000576613 PRPS2P11908 318 aa10.34□□□□□ -0.75
CTDNEP1-212ENST00000576613 IMPDH1P20839 514 aa10.34□□□□□ -0.75
CTDNEP1-212ENST00000576613 GPC1P35052 558 aa10.34□□□□□ -0.75
CTDNEP1-212ENST00000576613 CDH11P55287 796 aa10.34□□□□□ -0.75
CTDNEP1-212ENST00000576613 HSPB3Q12988 150 aa10.34□□□□□ -0.75
CTDNEP1-212ENST00000576613 STK11Q15831 433 aa10.34□□□□□ -0.75
CTDNEP1-212ENST00000576613 PRSS53Q2L4Q9 553 aa10.34□□□□□ -0.75
CTDNEP1-212ENST00000576613 TMEM249Q2WGJ8 235 aa10.34□□□□□ -0.75
CTDNEP1-212ENST00000576613 FCRLAQ7L513 359 aa10.34□□□□□ -0.75
CTDNEP1-212ENST00000576613 BHLHA15Q7RTS1 189 aaPredicted RBP10.34□□□□□ -0.75
CTDNEP1-212ENST00000576613 ZC3HAV1Q7Z2W4 902 aaKnown RBP10.34□□□□□ -0.75
CTDNEP1-212ENST00000576613 NUFIP2Q7Z417 695 aaKnown RBP10.34□□□□□ -0.75
CTDNEP1-212ENST00000576613 SZRD1Q7Z422 152 aa10.34□□□□□ -0.75
CTDNEP1-212ENST00000576613 ATG4DQ86TL0 474 aaPredicted RBP10.34□□□□□ -0.75
CTDNEP1-212ENST00000576613 RELL1Q8IUW5 271 aa10.34□□□□□ -0.75
CTDNEP1-212ENST00000576613 SLC22A9Q8IVM8 553 aa10.34□□□□□ -0.75
CTDNEP1-212ENST00000576613 TUSC5Q8IXB3 177 aa10.34□□□□□ -0.75
CTDNEP1-212ENST00000576613 OR6Y1Q8NGX8 325 aa10.34□□□□□ -0.75
CTDNEP1-212ENST00000576613 CEP70Q8NHQ1 597 aa10.34□□□□□ -0.75
CTDNEP1-212ENST00000576613 FAM76AQ8TAV0 307 aa10.34□□□□□ -0.75
CTDNEP1-212ENST00000576613 PUM2Q8TB72 1066 aaKnown RBP eCLIP10.34□□□□□ -0.756e-11■■■■■ 32.3
CTDNEP1-212ENST00000576613 MUCL1Q96DR8 90 aa10.34□□□□□ -0.75
CTDNEP1-212ENST00000576613 RADILQ96JH8 1075 aa10.34□□□□□ -0.75
CTDNEP1-212ENST00000576613 KCNK17Q96T54 332 aa10.34□□□□□ -0.75
CTDNEP1-212ENST00000576613 NPAS1Q99742 590 aa10.34□□□□□ -0.75
CTDNEP1-212ENST00000576613 TSPYL1Q9H0U9 437 aa10.34□□□□□ -0.75
CTDNEP1-212ENST00000576613 UBQLN4Q9NRR5 601 aa10.34□□□□□ -0.75
CTDNEP1-212ENST00000576613 ZDHHC18Q9NUE0 388 aa10.34□□□□□ -0.75
CTDNEP1-212ENST00000576613 TMEM160Q9NX00 188 aa10.34□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms