RNA–Protein interactions for RNA: ENST00000576409.5

ATPAF1-214, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATPAF1, Length 4,158 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-214ENST00000576409 HCRTR2O43614 444 aa16.78■□□□□ 0.28
ATPAF1-214ENST00000576409 PSPHP78330 225 aa16.78■□□□□ 0.28
ATPAF1-214ENST00000576409 SYT14P1Q58G82 188 aa16.78■□□□□ 0.28
ATPAF1-214ENST00000576409 QSOX2Q6ZRP7 698 aa16.78■□□□□ 0.28
ATPAF1-214ENST00000576409 MFSD4AQ8N468 514 aa16.78■□□□□ 0.28
ATPAF1-214ENST00000576409 OR13C2Q8NGS9 318 aa16.78■□□□□ 0.28
ATPAF1-214ENST00000576409 THAP3Q8WTV1 239 aaPredicted RBP16.78■□□□□ 0.28
ATPAF1-214ENST00000576409 TANKQ92844 425 aa16.78■□□□□ 0.28
ATPAF1-214ENST00000576409 ACTRT3Q9BYD9 372 aa16.78■□□□□ 0.28
ATPAF1-214ENST00000576409 CHMP1AQ9HD42 196 aaPredicted RBP16.78■□□□□ 0.28
ATPAF1-214ENST00000576409 SLAMF7Q9NQ25 335 aa16.78■□□□□ 0.28
ATPAF1-214ENST00000576409 FKBP14Q9NWM8 211 aa16.78■□□□□ 0.28
ATPAF1-214ENST00000576409 HYKKA2RU49 373 aa16.78■□□□□ 0.28
ATPAF1-214ENST00000576409 ZNF705EA8MWA4 302 aaPredicted RBP16.78■□□□□ 0.28
ATPAF1-214ENST00000576409 SCGB1D2O95969 90 aa16.78■□□□□ 0.28
ATPAF1-214ENST00000576409 CCKBRP32239 447 aa16.78■□□□□ 0.28
ATPAF1-214ENST00000576409 GDI2P50395 445 aaKnown RBP16.78■□□□□ 0.28
ATPAF1-214ENST00000576409 PGGHGQ32M88 737 aa16.78■□□□□ 0.28
ATPAF1-214ENST00000576409 GXYLT1Q4G148 440 aa16.78■□□□□ 0.28
ATPAF1-214ENST00000576409 EID2BQ96D98 161 aa16.78■□□□□ 0.28
ATPAF1-214ENST00000576409 BPIFA2Q96DR5 249 aa16.78■□□□□ 0.28
ATPAF1-214ENST00000576409 DLEC1Q9Y238 1755 aa16.78■□□□□ 0.28
ATPAF1-214ENST00000576409 PPM1DO15297 605 aa16.78■□□□□ 0.28
ATPAF1-214ENST00000576409 PCGF3Q3KNV8 242 aa16.78■□□□□ 0.28
ATPAF1-214ENST00000576409 BEST3Q8N1M1 668 aa16.78■□□□□ 0.28
ATPAF1-214ENST00000576409 OR7D2Q96RA2 312 aa16.78■□□□□ 0.28
ATPAF1-214ENST00000576409 DCDC2BA2VCK2 349 aa16.78■□□□□ 0.28
ATPAF1-214ENST00000576409 PRICKLE3O43900 615 aaPredicted RBP16.78■□□□□ 0.28
ATPAF1-214ENST00000576409 PVRP15151 417 aa16.78■□□□□ 0.28
ATPAF1-214ENST00000576409 SOX18P35713 384 aa16.78■□□□□ 0.28
ATPAF1-214ENST00000576409 DBPQ10586 325 aaPredicted RBP16.78■□□□□ 0.28
ATPAF1-214ENST00000576409 ZCCHC12Q6PEW1 402 aa16.78■□□□□ 0.28
ATPAF1-214ENST00000576409 CHTF18Q8WVB6 975 aa16.78■□□□□ 0.28
ATPAF1-214ENST00000576409 CST11Q9H112 138 aa16.78■□□□□ 0.28
ATPAF1-214ENST00000576409 SCDO00767 359 aa16.77■□□□□ 0.28
ATPAF1-214ENST00000576409 FZD7O75084 574 aa16.77■□□□□ 0.28
ATPAF1-214ENST00000576409 TRIM23P36406 574 aa16.77■□□□□ 0.28
ATPAF1-214ENST00000576409 PRLHRP49683 370 aa16.77■□□□□ 0.28
ATPAF1-214ENST00000576409 SMAD2Q15796 467 aaKnown RBP16.77■□□□□ 0.28
ATPAF1-214ENST00000576409 TCTN3Q6NUS6 607 aa16.77■□□□□ 0.28
ATPAF1-214ENST00000576409 LEG1Q6P5S2 330 aa16.77■□□□□ 0.28
ATPAF1-214ENST00000576409 FCRLAQ7L513 359 aa16.77■□□□□ 0.28
ATPAF1-214ENST00000576409 DTD2Q96FN9 168 aa16.77■□□□□ 0.28
ATPAF1-214ENST00000576409 CNN2Q99439 309 aaKnown RBP16.77■□□□□ 0.28
ATPAF1-214ENST00000576409 DOK1Q99704 481 aa16.77■□□□□ 0.28
ATPAF1-214ENST00000576409 ZNF350Q9GZX5 532 aa16.77■□□□□ 0.28
ATPAF1-214ENST00000576409 PHIPQ8WWQ0 1821 aa16.77■□□□□ 0.28
ATPAF1-214ENST00000576409 A0A1B0GV50 99 aa16.77■□□□□ 0.27
ATPAF1-214ENST00000576409 LRRTM2O43300 516 aa16.77■□□□□ 0.27
ATPAF1-214ENST00000576409 ADAMTS4O75173 837 aa16.77■□□□□ 0.27
ATPAF1-214ENST00000576409 CYB5AP00167 134 aa16.77■□□□□ 0.27
ATPAF1-214ENST00000576409 RPS5P46782 204 aaKnown RBP16.77■□□□□ 0.27
ATPAF1-214ENST00000576409 ARHGDIBP52566 201 aa16.77■□□□□ 0.27
ATPAF1-214ENST00000576409 P2RY14Q15391 338 aa16.77■□□□□ 0.27
ATPAF1-214ENST00000576409 PXDC1Q5TGL8 231 aa16.77■□□□□ 0.27
ATPAF1-214ENST00000576409 UBTD2Q8WUN7 234 aa16.77■□□□□ 0.27
ATPAF1-214ENST00000576409 GIMAP1Q8WWP7 306 aa16.77■□□□□ 0.27
ATPAF1-214ENST00000576409 MMABQ96EY8 250 aaPredicted RBP16.77■□□□□ 0.27
ATPAF1-214ENST00000576409 CPNE2Q96FN4 548 aaPredicted RBP16.77■□□□□ 0.27
ATPAF1-214ENST00000576409 ZNF559Q9BR84 538 aa16.77■□□□□ 0.27
ATPAF1-214ENST00000576409 LOXHD1Q8IVV2 1947 aa16.77■□□□□ 0.27
ATPAF1-214ENST00000576409 SLC2A10O95528 541 aa16.77■□□□□ 0.27
ATPAF1-214ENST00000576409 PRKCAP17252 672 aa16.77■□□□□ 0.27
ATPAF1-214ENST00000576409 XCR1P46094 333 aa16.77■□□□□ 0.27
ATPAF1-214ENST00000576409 ART1P52961 327 aa16.77■□□□□ 0.27
ATPAF1-214ENST00000576409 ERVK-25P63136 954 aa16.77■□□□□ 0.27
ATPAF1-214ENST00000576409 CCSAPQ6IQ19 270 aaPredicted RBP16.77■□□□□ 0.27
ATPAF1-214ENST00000576409 HAGHLQ6PII5 290 aaPredicted RBP16.77■□□□□ 0.27
ATPAF1-214ENST00000576409 LIMS2Q7Z4I7 341 aa16.77■□□□□ 0.27
ATPAF1-214ENST00000576409 ZER1Q7Z7L7 766 aa16.77■□□□□ 0.27
ATPAF1-214ENST00000576409 OR4M1Q8NGD0 313 aa16.77■□□□□ 0.27
ATPAF1-214ENST00000576409 GHSRQ92847 366 aa16.77■□□□□ 0.27
ATPAF1-214ENST00000576409 OPALINQ96PE5 141 aa16.77■□□□□ 0.27
ATPAF1-214ENST00000576409 GLIPR2Q9H4G4 154 aa16.77■□□□□ 0.27
ATPAF1-214ENST00000576409 PAPPAQ13219 1627 aa16.77■□□□□ 0.27
ATPAF1-214ENST00000576409 ANKRD61A6NGH8 418 aa16.76■□□□□ 0.27
ATPAF1-214ENST00000576409 UCHL1P09936 223 aa16.76■□□□□ 0.27
ATPAF1-214ENST00000576409 COL28A1Q2UY09 1125 aa16.76■□□□□ 0.27
ATPAF1-214ENST00000576409 FAM27D1Q5T7N8 215 aa16.76■□□□□ 0.27
ATPAF1-214ENST00000576409 PRICKLE2Q7Z3G6 844 aa16.76■□□□□ 0.27
ATPAF1-214ENST00000576409 NKAIN4Q8IVV8 208 aa16.76■□□□□ 0.27
ATPAF1-214ENST00000576409 MRTO4Q9UKD2 239 aaKnown RBP16.76■□□□□ 0.27
ATPAF1-214ENST00000576409 INSL6Q9Y581 213 aa16.76■□□□□ 0.27
ATPAF1-214ENST00000576409 SLC9B1P1A6NJY1 282 aa16.76■□□□□ 0.27
ATPAF1-214ENST00000576409 B4DXG7 233 aa16.76■□□□□ 0.27
ATPAF1-214ENST00000576409 RNF13O43567 381 aa16.76■□□□□ 0.27
ATPAF1-214ENST00000576409 HYAL3O43820 417 aaPredicted RBP16.76■□□□□ 0.27
ATPAF1-214ENST00000576409 ZNF888P0CJ79 500 aaPredicted RBP16.76■□□□□ 0.27
ATPAF1-214ENST00000576409 EPCAMP16422 314 aa16.76■□□□□ 0.27
ATPAF1-214ENST00000576409 HIST1H1TP22492 207 aaPredicted RBP16.76■□□□□ 0.27
ATPAF1-214ENST00000576409 GABRA5P31644 462 aa16.76■□□□□ 0.27
ATPAF1-214ENST00000576409 FAM198BQ6UWH4 519 aa16.76■□□□□ 0.27
ATPAF1-214ENST00000576409 SGTBQ96EQ0 304 aa16.76■□□□□ 0.27
ATPAF1-214ENST00000576409 LRIG1Q96JA1 1093 aa16.76■□□□□ 0.27
ATPAF1-214ENST00000576409 TMPRSS11EQ9UL52 423 aa16.76■□□□□ 0.27
ATPAF1-214ENST00000576409 HEBP2Q9Y5Z4 205 aa16.76■□□□□ 0.27
ATPAF1-214ENST00000576409 PLPP1O14494 284 aa16.76■□□□□ 0.27
ATPAF1-214ENST00000576409 HRO43593 1189 aa16.76■□□□□ 0.27
ATPAF1-214ENST00000576409 LATS1O95835 1130 aa16.76■□□□□ 0.27
ATPAF1-214ENST00000576409 SLC6A11P48066 632 aa16.76■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms