RNA–Protein interactions for RNA: ENST00000575830.2

CDC27-218, Transcript of cell division cycle 27, humanhuman

TSL 5

Gene CDC27, Length 397 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC27-218ENST00000575830 CD1EP15812 388 aa2.08□□□□□ -2.08
CDC27-218ENST00000575830 UGT1A3P35503 534 aa2.08□□□□□ -2.08
CDC27-218ENST00000575830 RPL4P36578 427 aaKnown RBP2.08□□□□□ -2.08
CDC27-218ENST00000575830 EMDP50402 254 aa2.08□□□□□ -2.08
CDC27-218ENST00000575830 STARD6P59095 220 aa2.08□□□□□ -2.08
CDC27-218ENST00000575830 RND3P61587 244 aa2.08□□□□□ -2.08
CDC27-218ENST00000575830 NOP14P78316 857 aaKnown RBP2.08□□□□□ -2.08
CDC27-218ENST00000575830 MYBPC1Q00872 1141 aa2.08□□□□□ -2.08
CDC27-218ENST00000575830 SNX1Q13596 522 aa2.08□□□□□ -2.08
CDC27-218ENST00000575830 PDIA5Q14554 519 aa2.08□□□□□ -2.08
CDC27-218ENST00000575830 PVRIGQ6DKI7 326 aa2.08□□□□□ -2.08
CDC27-218ENST00000575830 PLBD1Q6P4A8 553 aa2.08□□□□□ -2.08
CDC27-218ENST00000575830 PPP1R27Q86WC6 154 aa2.08□□□□□ -2.08
CDC27-218ENST00000575830 TGIF2LYQ8IUE0 185 aa2.08□□□□□ -2.08
CDC27-218ENST00000575830 BATF2Q8N1L9 274 aa2.08□□□□□ -2.08
CDC27-218ENST00000575830 BPIFB2Q8N4F0 458 aa2.08□□□□□ -2.08
CDC27-218ENST00000575830 LINC01555Q8NAE3 123 aa2.08□□□□□ -2.08
CDC27-218ENST00000575830 LEMD2Q8NC56 503 aa2.08□□□□□ -2.08
CDC27-218ENST00000575830 OR9A4Q8NGU2 314 aa2.08□□□□□ -2.08
CDC27-218ENST00000575830 NCLNQ969V3 563 aa2.08□□□□□ -2.08
CDC27-218ENST00000575830 FAM104AQ969W3 186 aa2.08□□□□□ -2.08
CDC27-218ENST00000575830 HAVCR1Q96D42 359 aa2.08□□□□□ -2.08
CDC27-218ENST00000575830 FEM1AQ9BSK4 669 aa2.08□□□□□ -2.08
CDC27-218ENST00000575830 ATG10Q9H0Y0 220 aa2.08□□□□□ -2.08
CDC27-218ENST00000575830 ABCG8Q9H221 673 aa2.08□□□□□ -2.08
CDC27-218ENST00000575830 PNO1Q9NRX1 252 aaKnown RBP2.08□□□□□ -2.08
CDC27-218ENST00000575830 IL19Q9UHD0 177 aa2.08□□□□□ -2.08
CDC27-218ENST00000575830 IL20RAQ9UHF4 553 aa2.08□□□□□ -2.08
CDC27-218ENST00000575830 BCAP29Q9UHQ4 241 aa2.08□□□□□ -2.08
CDC27-218ENST00000575830 STRAPQ9Y3F4 350 aaKnown RBP2.08□□□□□ -2.08
CDC27-218ENST00000575830 GMPPBQ9Y5P6 360 aa2.08□□□□□ -2.08
CDC27-218ENST00000575830 FKBP7Q9Y680 259 aa2.08□□□□□ -2.08
CDC27-218ENST00000575830 CFAP54Q96N23 3096 aa2.08□□□□□ -2.08
CDC27-218ENST00000575830 USP34Q70CQ2 3546 aa2.08□□□□□ -2.08
CDC27-218ENST00000575830 ABCC3O15438 1527 aa2.07□□□□□ -2.08
CDC27-218ENST00000575830 ABCC1P33527 1531 aa2.07□□□□□ -2.08
CDC27-218ENST00000575830 RLFQ13129 1914 aa2.07□□□□□ -2.08
CDC27-218ENST00000575830 KIF14Q15058 1648 aa2.07□□□□□ -2.08
CDC27-218ENST00000575830 EMC8O43402 210 aa2.07□□□□□ -2.08
CDC27-218ENST00000575830 HSF2BPO75031 334 aa2.07□□□□□ -2.08
CDC27-218ENST00000575830 TIMP1P01033 207 aa2.07□□□□□ -2.08
CDC27-218ENST00000575830 HLA-DPA1P20036 260 aa2.07□□□□□ -2.08
CDC27-218ENST00000575830 NF2P35240 595 aa2.07□□□□□ -2.08
CDC27-218ENST00000575830 MRPS11P82912 194 aaKnown RBP2.07□□□□□ -2.08
CDC27-218ENST00000575830 UBXN1Q04323 297 aa2.07□□□□□ -2.08
CDC27-218ENST00000575830 ZNF154Q13106 437 aa2.07□□□□□ -2.08
CDC27-218ENST00000575830 CBX3Q13185 183 aa2.07□□□□□ -2.08
CDC27-218ENST00000575830 EIF4EBP2Q13542 120 aaPredicted RBP2.07□□□□□ -2.08
CDC27-218ENST00000575830 DPYSQ14117 519 aa2.07□□□□□ -2.08
CDC27-218ENST00000575830 GAMTQ14353 236 aa2.07□□□□□ -2.08
CDC27-218ENST00000575830 ELAVL3Q14576 367 aaKnown RBP2.07□□□□□ -2.08
CDC27-218ENST00000575830 TMEM52BQ4KMG9 183 aa2.07□□□□□ -2.08
CDC27-218ENST00000575830 OR5M10Q6IEU7 315 aa2.07□□□□□ -2.08
CDC27-218ENST00000575830 TAF8Q7Z7C8 310 aa2.07□□□□□ -2.08
CDC27-218ENST00000575830 CENPSQ8N2Z9 138 aa2.07□□□□□ -2.08
CDC27-218ENST00000575830 RNF148Q8N7C7 305 aa2.07□□□□□ -2.08
CDC27-218ENST00000575830 ZNF713Q8N859 430 aaPredicted RBP2.07□□□□□ -2.08
CDC27-218ENST00000575830 CCNYQ8ND76 341 aa2.07□□□□□ -2.08
CDC27-218ENST00000575830 BBS1Q8NFJ9 593 aa2.07□□□□□ -2.08
CDC27-218ENST00000575830 ATP6V0A1Q93050 837 aa2.07□□□□□ -2.08
CDC27-218ENST00000575830 IL4I1Q96RQ9 567 aa2.07□□□□□ -2.08
CDC27-218ENST00000575830 NMNAT2Q9BZQ4 307 aa2.07□□□□□ -2.08
CDC27-218ENST00000575830 GPN2Q9H9Y4 310 aaPredicted RBP2.07□□□□□ -2.08
CDC27-218ENST00000575830 TRPV5Q9NQA5 729 aa2.07□□□□□ -2.08
CDC27-218ENST00000575830 P2RX2Q9UBL9 471 aa2.07□□□□□ -2.08
CDC27-218ENST00000575830 PNPLA6Q8IY17 1366 aa2.07□□□□□ -2.08
CDC27-218ENST00000575830 CCDC88BA6NC98 1476 aa2.07□□□□□ -2.08
CDC27-218ENST00000575830 ATP7AQ04656 1500 aa2.07□□□□□ -2.08
CDC27-218ENST00000575830 DISP1Q96F81 1524 aa2.07□□□□□ -2.08
CDC27-218ENST00000575830 GLI3P10071 1580 aa2.06□□□□□ -2.08
CDC27-218ENST00000575830 ZC3H13Q5T200 1668 aaKnown RBP2.06□□□□□ -2.08
CDC27-218ENST00000575830 CASZ1Q86V15 1759 aa2.06□□□□□ -2.08
CDC27-218ENST00000575830 ZSCAN5BA6NJL1 495 aa2.06□□□□□ -2.08
CDC27-218ENST00000575830 E9PLD3 99 aa2.06□□□□□ -2.08
CDC27-218ENST00000575830 PPIHO43447 177 aaKnown RBP2.06□□□□□ -2.08
CDC27-218ENST00000575830 TRIM3O75382 744 aaPredicted RBP2.06□□□□□ -2.08
CDC27-218ENST00000575830 ZNF254O75437 659 aa2.06□□□□□ -2.08
CDC27-218ENST00000575830 BCAS2O75934 225 aaPredicted RBP2.06□□□□□ -2.08
CDC27-218ENST00000575830 ACTL6AO96019 429 aa2.06□□□□□ -2.08
CDC27-218ENST00000575830 VDRP11473 427 aa2.06□□□□□ -2.08
CDC27-218ENST00000575830 BCKDHAP12694 445 aa2.06□□□□□ -2.08
CDC27-218ENST00000575830 IGLL1P15814 213 aa2.06□□□□□ -2.08
CDC27-218ENST00000575830 GCFC2P16383 781 aaKnown RBP2.06□□□□□ -2.08
CDC27-218ENST00000575830 XRCC1P18887 633 aaPredicted RBP2.06□□□□□ -2.08
CDC27-218ENST00000575830 PTBP1P26599 531 aaKnown RBP eCLIP2.06□□□□□ -2.08
CDC27-218ENST00000575830 AKT2P31751 481 aa2.06□□□□□ -2.08
CDC27-218ENST00000575830 PRDX2P32119 198 aa2.06□□□□□ -2.08
CDC27-218ENST00000575830 COPB2P35606 906 aa2.06□□□□□ -2.08
CDC27-218ENST00000575830 ZNF133P52736 654 aaPredicted RBP2.06□□□□□ -2.08
CDC27-218ENST00000575830 SRYQ05066 204 aa2.06□□□□□ -2.08
CDC27-218ENST00000575830 TFDP1Q14186 410 aa2.06□□□□□ -2.08
CDC27-218ENST00000575830 BTG3Q14201 252 aaPredicted RBP2.06□□□□□ -2.08
CDC27-218ENST00000575830 UBE2V2Q15819 145 aa2.06□□□□□ -2.08
CDC27-218ENST00000575830 KYAT1Q16773 422 aa2.06□□□□□ -2.08
CDC27-218ENST00000575830 LRRC36Q1X8D7 754 aa2.06□□□□□ -2.08
CDC27-218ENST00000575830 TEX44Q53QW1 395 aa2.06□□□□□ -2.08
CDC27-218ENST00000575830 BEND6Q5SZJ8 279 aaPredicted RBP2.06□□□□□ -2.08
CDC27-218ENST00000575830 ETFRF1Q6IPR1 90 aa2.06□□□□□ -2.08
CDC27-218ENST00000575830 FRA10AC1Q70Z53 315 aa2.06□□□□□ -2.08
CDC27-218ENST00000575830 ERI1Q8IV48 349 aaKnown RBP2.06□□□□□ -2.08
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms