RNA–Protein interactions for RNA: ENST00000575783.5

CTDNEP1-211, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 5

Gene CTDNEP1, Length 876 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-211ENST00000575783 IGHV4-61A0A0C4DH41 118 aa14.36□□□□□ -0.11
CTDNEP1-211ENST00000575783 VWC2LB2RUY7 222 aa14.36□□□□□ -0.11
CTDNEP1-211ENST00000575783 C9JVG2 144 aa14.36□□□□□ -0.11
CTDNEP1-211ENST00000575783 GGT1P19440 569 aa14.36□□□□□ -0.11
CTDNEP1-211ENST00000575783 SHC1P29353 583 aa14.36□□□□□ -0.11
CTDNEP1-211ENST00000575783 PDLIM4P50479 330 aa14.36□□□□□ -0.11
CTDNEP1-211ENST00000575783 CHRNB3Q05901 458 aa14.36□□□□□ -0.11
CTDNEP1-211ENST00000575783 TRAF3Q13114 568 aa14.36□□□□□ -0.11
CTDNEP1-211ENST00000575783 ZNHIT3Q15649 155 aaPredicted RBP14.36□□□□□ -0.11
CTDNEP1-211ENST00000575783 TIMM23BQ5SRD1 257 aa14.36□□□□□ -0.11
CTDNEP1-211ENST00000575783 FAM219BQ5XKK7 198 aa14.36□□□□□ -0.11
CTDNEP1-211ENST00000575783 B3GLCTQ6Y288 498 aa14.36□□□□□ -0.11
CTDNEP1-211ENST00000575783 C3orf62Q6ZUJ4 267 aa14.36□□□□□ -0.11
CTDNEP1-211ENST00000575783 FCRLAQ7L513 359 aa14.36□□□□□ -0.11
CTDNEP1-211ENST00000575783 PTGR2Q8N8N7 351 aaPredicted RBP14.36□□□□□ -0.11
CTDNEP1-211ENST00000575783 OR4F6Q8NGB9 312 aa14.36□□□□□ -0.11
CTDNEP1-211ENST00000575783 CPNE4Q96A23 557 aaPredicted RBP14.36□□□□□ -0.11
CTDNEP1-211ENST00000575783 ZNF775Q96BV0 537 aaPredicted RBP14.36□□□□□ -0.11
CTDNEP1-211ENST00000575783 ZMYND19Q96E35 227 aaPredicted RBP14.36□□□□□ -0.11
CTDNEP1-211ENST00000575783 BBS4Q96RK4 519 aa14.36□□□□□ -0.11
CTDNEP1-211ENST00000575783 OCEL1Q9H607 264 aa14.36□□□□□ -0.11
CTDNEP1-211ENST00000575783 SLC35C2Q9NQQ7 365 aa14.36□□□□□ -0.11
CTDNEP1-211ENST00000575783 NMRK1Q9NWW6 199 aa14.36□□□□□ -0.11
CTDNEP1-211ENST00000575783 DMGDHQ9UI17 866 aaKnown RBP14.36□□□□□ -0.11
CTDNEP1-211ENST00000575783 MGAT4BQ9UQ53 548 aa14.36□□□□□ -0.11
CTDNEP1-211ENST00000575783 PMF1-BGLAPU3KQ54 211 aa14.36□□□□□ -0.11
CTDNEP1-211ENST00000575783 PKD1L1Q8TDX9 2849 aa14.36□□□□□ -0.11
CTDNEP1-211ENST00000575783 DHRS4L1P0CG22 281 aa14.35□□□□□ -0.11
CTDNEP1-211ENST00000575783 GABRA3P34903 492 aa14.35□□□□□ -0.11
CTDNEP1-211ENST00000575783 CHRNEQ04844 493 aa14.35□□□□□ -0.11
CTDNEP1-211ENST00000575783 PLPPR5Q32ZL2 321 aa14.35□□□□□ -0.11
CTDNEP1-211ENST00000575783 METTL2BQ6P1Q9 378 aaKnown RBP14.35□□□□□ -0.11
CTDNEP1-211ENST00000575783 TMEM107Q6UX40 140 aa14.35□□□□□ -0.11
CTDNEP1-211ENST00000575783 POC1BQ8TC44 478 aa14.35□□□□□ -0.11
CTDNEP1-211ENST00000575783 SH3YL1Q96HL8 342 aaPredicted RBP14.35□□□□□ -0.11
CTDNEP1-211ENST00000575783 FOXN4Q96NZ1 517 aa14.35□□□□□ -0.11
CTDNEP1-211ENST00000575783 RNF14Q9UBS8 474 aa14.35□□□□□ -0.11
CTDNEP1-211ENST00000575783 PPP2R2CQ9Y2T4 447 aa14.35□□□□□ -0.11
CTDNEP1-211ENST00000575783 PCNX3Q9H6A9 2034 aa14.34□□□□□ -0.11
CTDNEP1-211ENST00000575783 IGHV3-15A0A0B4J1V0 119 aa14.34□□□□□ -0.11
CTDNEP1-211ENST00000575783 GOLGA8QA0A0J9YX86 632 aa14.34□□□□□ -0.11
CTDNEP1-211ENST00000575783 GNG14A0A1W2PPG7 69 aa14.34□□□□□ -0.11
CTDNEP1-211ENST00000575783 GXYLT2A0PJZ3 443 aa14.34□□□□□ -0.11
CTDNEP1-211ENST00000575783 C7orf72A4D263 438 aa14.34□□□□□ -0.11
CTDNEP1-211ENST00000575783 GOLGA8OA6NCC3 632 aa14.34□□□□□ -0.11
CTDNEP1-211ENST00000575783 GOLGA8NF8WBI6 632 aa14.34□□□□□ -0.11
CTDNEP1-211ENST00000575783 GOLGA8RI6L899 631 aa14.34□□□□□ -0.11
CTDNEP1-211ENST00000575783 IGKV1D-16P01601 117 aa14.34□□□□□ -0.11
CTDNEP1-211ENST00000575783 JUNP05412 331 aaKnown RBP14.34□□□□□ -0.11
CTDNEP1-211ENST00000575783 C2P06681 752 aa14.34□□□□□ -0.11
CTDNEP1-211ENST00000575783 ENPP1P22413 925 aa14.34□□□□□ -0.11
CTDNEP1-211ENST00000575783 IGHV1-2P23083 117 aa14.34□□□□□ -0.11
CTDNEP1-211ENST00000575783 PTAFRP25105 342 aa14.34□□□□□ -0.11
CTDNEP1-211ENST00000575783 CD40P25942 277 aa14.34□□□□□ -0.11
CTDNEP1-211ENST00000575783 OR3A2P47893 321 aa14.34□□□□□ -0.11
CTDNEP1-211ENST00000575783 MANFP55145 182 aaKnown RBP14.34□□□□□ -0.11
CTDNEP1-211ENST00000575783 ACTG1P63261 375 aa14.34□□□□□ -0.11
CTDNEP1-211ENST00000575783 SLC18A2Q05940 514 aa14.34□□□□□ -0.11
CTDNEP1-211ENST00000575783 KLC3Q6P597 504 aa14.34□□□□□ -0.11
CTDNEP1-211ENST00000575783 TRABD2AQ86V40 505 aa14.34□□□□□ -0.11
CTDNEP1-211ENST00000575783 P2RY8Q86VZ1 359 aa14.34□□□□□ -0.11
CTDNEP1-211ENST00000575783 ATP6V1C2Q8NEY4 427 aa14.34□□□□□ -0.11
CTDNEP1-211ENST00000575783 OR52N5Q8NH56 324 aa14.34□□□□□ -0.11
CTDNEP1-211ENST00000575783 KLHDC3Q9BQ90 382 aa14.34□□□□□ -0.11
CTDNEP1-211ENST00000575783 SOX7Q9BT81 388 aa14.34□□□□□ -0.11
CTDNEP1-211ENST00000575783 BRF2Q9HAW0 419 aa14.34□□□□□ -0.11
CTDNEP1-211ENST00000575783 GP6Q9HCN6 339 aa14.34□□□□□ -0.11
CTDNEP1-211ENST00000575783 VPS29Q9UBQ0 182 aa14.34□□□□□ -0.11
CTDNEP1-211ENST00000575783 MCM8Q9UJA3 840 aa14.34□□□□□ -0.11
CTDNEP1-211ENST00000575783 PCTPQ9UKL6 214 aa14.34□□□□□ -0.11
CTDNEP1-211ENST00000575783 SNX6Q9UNH7 406 aa14.34□□□□□ -0.11
CTDNEP1-211ENST00000575783 C19orf53Q9UNZ5 99 aaPredicted RBP14.34□□□□□ -0.11
CTDNEP1-211ENST00000575783 SNX24Q9Y343 169 aa14.34□□□□□ -0.11
CTDNEP1-211ENST00000575783 ATP23Q9Y6H3 246 aa14.34□□□□□ -0.11
CTDNEP1-211ENST00000575783 A0A1W2PR80 420 aa14.33□□□□□ -0.12
CTDNEP1-211ENST00000575783 OR5H1A6NKK0 313 aa14.33□□□□□ -0.12
CTDNEP1-211ENST00000575783 M0R1B8 84 aa14.33□□□□□ -0.12
CTDNEP1-211ENST00000575783 NDUFS8O00217 210 aa14.33□□□□□ -0.12
CTDNEP1-211ENST00000575783 UPK1AO00322 258 aa14.33□□□□□ -0.12
CTDNEP1-211ENST00000575783 PPP6CO00743 305 aa14.33□□□□□ -0.12
CTDNEP1-211ENST00000575783 VENTXO95231 258 aa14.33□□□□□ -0.12
CTDNEP1-211ENST00000575783 KCNH1O95259 989 aa14.33□□□□□ -0.12
CTDNEP1-211ENST00000575783 EDNRAP25101 427 aa14.33□□□□□ -0.12
CTDNEP1-211ENST00000575783 NCBP2P52298 156 aaKnown RBP eCLIP14.33□□□□□ -0.12
CTDNEP1-211ENST00000575783 HEPACAMQ14CZ8 416 aa14.33□□□□□ -0.12
CTDNEP1-211ENST00000575783 TMEM176BQ3YBM2 270 aaPredicted RBP14.33□□□□□ -0.12
CTDNEP1-211ENST00000575783 ZNF544Q6NX49 715 aa14.33□□□□□ -0.12
CTDNEP1-211ENST00000575783 KLHL17Q6TDP4 642 aa14.33□□□□□ -0.12
CTDNEP1-211ENST00000575783 CYS1Q717R9 158 aa14.33□□□□□ -0.12
CTDNEP1-211ENST00000575783 RPS27LQ71UM5 84 aaKnown RBP14.33□□□□□ -0.12
CTDNEP1-211ENST00000575783 SSX8Q7RTT4 187 aa14.33□□□□□ -0.12
CTDNEP1-211ENST00000575783 OR4C3Q8NH37 302 aa14.33□□□□□ -0.12
CTDNEP1-211ENST00000575783 FAM110BQ8TC76 370 aa14.33□□□□□ -0.12
CTDNEP1-211ENST00000575783 ACTRT2Q8TDY3 377 aa14.33□□□□□ -0.12
CTDNEP1-211ENST00000575783 PIK3R3Q92569 461 aa14.33□□□□□ -0.12
CTDNEP1-211ENST00000575783 INPP5KQ9BT40 448 aa14.33□□□□□ -0.12
CTDNEP1-211ENST00000575783 C1QTNF6Q9BXI9 259 aa14.33□□□□□ -0.12
CTDNEP1-211ENST00000575783 BHLHE41Q9C0J9 482 aaPredicted RBP14.33□□□□□ -0.12
CTDNEP1-211ENST00000575783 CXorf36Q9H7Y0 433 aa14.33□□□□□ -0.12
CTDNEP1-211ENST00000575783 C3orf14Q9HBI5 128 aa14.33□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 54.5 ms