RNA–Protein interactions for RNA: ENST00000575112.5

RPAIN-215, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 3,817 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-215ENST00000575112 DNAJB8Q8NHS0 232 aa7.97□□□□□ -1.13
RPAIN-215ENST00000575112 ZNF671Q8TAW3 534 aa7.97□□□□□ -1.13
RPAIN-215ENST00000575112 FAM174AQ8TBP5 190 aa7.97□□□□□ -1.13
RPAIN-215ENST00000575112 WFIKKN2Q8TEU8 576 aa7.97□□□□□ -1.13
RPAIN-215ENST00000575112 NKX3-1Q99801 234 aaPredicted RBP7.97□□□□□ -1.13
RPAIN-215ENST00000575112 POLHQ9Y253 713 aa7.97□□□□□ -1.13
RPAIN-215ENST00000575112 GPR55Q9Y2T6 319 aaPredicted RBP7.97□□□□□ -1.13
RPAIN-215ENST00000575112 COL4A6Q14031 1691 aa7.97□□□□□ -1.13
RPAIN-215ENST00000575112 BLOC1S5-TXNDC5H3BN57 136 aa7.97□□□□□ -1.13
RPAIN-215ENST00000575112 HMGN4O00479 90 aa7.97□□□□□ -1.13
RPAIN-215ENST00000575112 EFCAB14O75071 495 aa7.97□□□□□ -1.13
RPAIN-215ENST00000575112 MMP11P24347 488 aa7.97□□□□□ -1.13
RPAIN-215ENST00000575112 ILF3Q12906 894 aaKnown RBP eCLIP7.97□□□□□ -1.132e-6■■□□□ 12.4
RPAIN-215ENST00000575112 KCNC3Q14003 757 aa7.97□□□□□ -1.13
RPAIN-215ENST00000575112 SHHQ15465 462 aa7.97□□□□□ -1.13
RPAIN-215ENST00000575112 TIMM50Q3ZCQ8 353 aa7.97□□□□□ -1.13
RPAIN-215ENST00000575112 ZNF628Q5EBL2 1059 aa7.97□□□□□ -1.13
RPAIN-215ENST00000575112 ZNF793Q6ZN11 406 aa7.97□□□□□ -1.13
RPAIN-215ENST00000575112 IZUMO1Q8IYV9 350 aa7.97□□□□□ -1.13
RPAIN-215ENST00000575112 CDK20Q8IZL9 346 aa7.97□□□□□ -1.13
RPAIN-215ENST00000575112 LINC00471Q8N535 108 aa7.97□□□□□ -1.13
RPAIN-215ENST00000575112 BBS1Q8NFJ9 593 aa7.97□□□□□ -1.13
RPAIN-215ENST00000575112 GCDHQ92947 438 aaPredicted RBP7.97□□□□□ -1.13
RPAIN-215ENST00000575112 ASB16Q96NS5 453 aa7.97□□□□□ -1.13
RPAIN-215ENST00000575112 DPCDQ9BVM2 203 aaPredicted RBP7.97□□□□□ -1.13
RPAIN-215ENST00000575112 VPS13AQ96RL7 3174 aa7.97□□□□□ -1.13
RPAIN-215ENST00000575112 OPN1LWP04000 364 aa7.96□□□□□ -1.13
RPAIN-215ENST00000575112 ARAFP10398 606 aa7.96□□□□□ -1.13
RPAIN-215ENST00000575112 GCGRP47871 477 aa7.96□□□□□ -1.13
RPAIN-215ENST00000575112 FOXL2P58012 376 aa7.96□□□□□ -1.13
RPAIN-215ENST00000575112 PPP1CAP62136 330 aa7.96□□□□□ -1.13
RPAIN-215ENST00000575112 DUSP2Q05923 314 aa7.96□□□□□ -1.13
RPAIN-215ENST00000575112 PRDX1Q06830 199 aaKnown RBP7.96□□□□□ -1.13
RPAIN-215ENST00000575112 ITPRIPL2Q3MIP1 535 aa7.96□□□□□ -1.13
RPAIN-215ENST00000575112 PRICKLE2Q7Z3G6 844 aa7.96□□□□□ -1.13
RPAIN-215ENST00000575112 PIGXQ8TBF5 258 aa7.96□□□□□ -1.13
RPAIN-215ENST00000575112 TMEM255BQ8WV15 326 aa7.96□□□□□ -1.13
RPAIN-215ENST00000575112 RBM18Q96H35 190 aaKnown RBP7.96□□□□□ -1.13
RPAIN-215ENST00000575112 PEX11GQ96HA9 241 aa7.96□□□□□ -1.13
RPAIN-215ENST00000575112 MSLNLQ96KJ4 702 aa7.96□□□□□ -1.13
RPAIN-215ENST00000575112 GON7Q9BXV9 100 aa7.96□□□□□ -1.13
RPAIN-215ENST00000575112 TCEAL2Q9H3H9 227 aaPredicted RBP7.96□□□□□ -1.13
RPAIN-215ENST00000575112 FBXO34Q9NWN3 711 aa7.96□□□□□ -1.13
RPAIN-215ENST00000575112 SAGE1Q9NXZ1 904 aa7.96□□□□□ -1.13
RPAIN-215ENST00000575112 KCNN3Q9UGI6 736 aa7.96□□□□□ -1.13
RPAIN-215ENST00000575112 ZNF222Q9UK12 451 aa7.96□□□□□ -1.13
RPAIN-215ENST00000575112 ATXN7L1Q9ULK2 861 aaPredicted RBP7.96□□□□□ -1.13
RPAIN-215ENST00000575112 SLC7A7Q9UM01 511 aa7.96□□□□□ -1.13
RPAIN-215ENST00000575112 MGAT4AQ9UM21 535 aa7.96□□□□□ -1.13
RPAIN-215ENST00000575112 SF3B6Q9Y3B4 125 aaKnown RBP7.96□□□□□ -1.13
RPAIN-215ENST00000575112 DSPPQ9NZW4 1301 aa7.96□□□□□ -1.13
RPAIN-215ENST00000575112 IGLV3-16A0A075B6K0 115 aa7.96□□□□□ -1.14
RPAIN-215ENST00000575112 SOCS6O14544 535 aa7.96□□□□□ -1.14
RPAIN-215ENST00000575112 TSPAN4O14817 238 aa7.96□□□□□ -1.14
RPAIN-215ENST00000575112 C1QBP02746 253 aa7.96□□□□□ -1.14
RPAIN-215ENST00000575112 ELK1P19419 428 aa7.96□□□□□ -1.14
RPAIN-215ENST00000575112 HIST1H1TP22492 207 aaPredicted RBP7.96□□□□□ -1.14
RPAIN-215ENST00000575112 ERP29P30040 261 aaKnown RBP7.96□□□□□ -1.14
RPAIN-215ENST00000575112 GIPRP48546 466 aa7.96□□□□□ -1.14
RPAIN-215ENST00000575112 OR10A3P58181 314 aa7.96□□□□□ -1.14
RPAIN-215ENST00000575112 RRAS2P62070 204 aaPredicted RBP7.96□□□□□ -1.14
RPAIN-215ENST00000575112 TNK1Q13470 666 aa7.96□□□□□ -1.14
RPAIN-215ENST00000575112 GGTA1PQ4G0N0 100 aa7.96□□□□□ -1.14
RPAIN-215ENST00000575112 ZNF776Q68DI1 518 aaPredicted RBP7.96□□□□□ -1.14
RPAIN-215ENST00000575112 ZER1Q7Z7L7 766 aa7.96□□□□□ -1.14
RPAIN-215ENST00000575112 ZNF707Q96C28 371 aaPredicted RBP7.96□□□□□ -1.14
RPAIN-215ENST00000575112 WDFY2Q96P53 400 aa7.96□□□□□ -1.14
RPAIN-215ENST00000575112 MYADMQ96S97 322 aa7.96□□□□□ -1.14
RPAIN-215ENST00000575112 MS4A8Q9BY19 250 aa7.96□□□□□ -1.14
RPAIN-215ENST00000575112 BRF2Q9HAW0 419 aa7.96□□□□□ -1.14
RPAIN-215ENST00000575112 GLTPQ9NZD2 209 aa7.96□□□□□ -1.14
RPAIN-215ENST00000575112 SEC14L4Q9UDX3 406 aa7.96□□□□□ -1.14
RPAIN-215ENST00000575112 RPL36Q9Y3U8 105 aaKnown RBP7.96□□□□□ -1.14
RPAIN-215ENST00000575112 A0A0A6YYC8 382 aaPredicted RBP7.96□□□□□ -1.14
RPAIN-215ENST00000575112 TCRBV21S2A2A0A5A6 115 aa7.96□□□□□ -1.14
RPAIN-215ENST00000575112 PRR23D1E9PI22 279 aaPredicted RBP7.96□□□□□ -1.14
RPAIN-215ENST00000575112 I3L1I5 382 aaPredicted RBP7.96□□□□□ -1.14
RPAIN-215ENST00000575112 NPC1O15118 1278 aa7.96□□□□□ -1.14
RPAIN-215ENST00000575112 RDH16O75452 317 aa7.96□□□□□ -1.14
RPAIN-215ENST00000575112 MPC2O95563 127 aa7.96□□□□□ -1.14
RPAIN-215ENST00000575112 CHRM4P08173 479 aa7.96□□□□□ -1.14
RPAIN-215ENST00000575112 PRR23D2P0DMB1 279 aaPredicted RBP7.96□□□□□ -1.14
RPAIN-215ENST00000575112 APEHP13798 732 aaKnown RBP7.96□□□□□ -1.14
RPAIN-215ENST00000575112 ATF4P18848 351 aaPredicted RBP7.96□□□□□ -1.14
RPAIN-215ENST00000575112 SOX2P48431 317 aa7.96□□□□□ -1.14
RPAIN-215ENST00000575112 KHKP50053 298 aa7.96□□□□□ -1.14
RPAIN-215ENST00000575112 PDX1P52945 283 aa7.96□□□□□ -1.14
RPAIN-215ENST00000575112 GAS1P54826 345 aa7.96□□□□□ -1.14
RPAIN-215ENST00000575112 PRMT2P55345 433 aa7.96□□□□□ -1.14
RPAIN-215ENST00000575112 RHAGQ02094 409 aa7.96□□□□□ -1.14
RPAIN-215ENST00000575112 ESCO2Q56NI9 601 aa7.96□□□□□ -1.14
RPAIN-215ENST00000575112 LCN1P1Q5VSP4 162 aa7.96□□□□□ -1.14
RPAIN-215ENST00000575112 OR5M10Q6IEU7 315 aa7.96□□□□□ -1.14
RPAIN-215ENST00000575112 PGBD2Q6P3X8 592 aa7.96□□□□□ -1.14
RPAIN-215ENST00000575112 TMEM65Q6PI78 240 aa7.96□□□□□ -1.14
RPAIN-215ENST00000575112 TCTE3Q8IZS6 198 aa7.96□□□□□ -1.14
RPAIN-215ENST00000575112 OR52L1Q8NGH7 329 aa7.96□□□□□ -1.14
RPAIN-215ENST00000575112 OR4K13Q8NH42 304 aa7.96□□□□□ -1.14
RPAIN-215ENST00000575112 OR5K2Q8NHB8 316 aa7.96□□□□□ -1.14
RPAIN-215ENST00000575112 CEP76Q8TAP6 659 aa7.96□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms