RNA–Protein interactions for RNA: ENST00000574799.5

CCDC40-212, Transcript of coiled-coil domain containing 40, humanhuman

TSL 1 (best)

Gene CCDC40, Length 3,795 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-212ENST00000574799 LYPLAL1Q5VWZ2 237 aa8.97□□□□□ -0.97
CCDC40-212ENST00000574799 OR4D10Q8NGI6 311 aa8.97□□□□□ -0.97
CCDC40-212ENST00000574799 SLC6A18Q96N87 628 aa8.97□□□□□ -0.97
CCDC40-212ENST00000574799 YIPF4Q9BSR8 244 aa8.97□□□□□ -0.97
CCDC40-212ENST00000574799 QRSL1Q9H0R6 528 aaKnown RBP8.97□□□□□ -0.97
CCDC40-212ENST00000574799 DDX31Q9H8H2 851 aaKnown RBP8.97□□□□□ -0.97
CCDC40-212ENST00000574799 TREM1Q9NP99 234 aa8.97□□□□□ -0.97
CCDC40-212ENST00000574799 IL26Q9NPH9 171 aa8.97□□□□□ -0.97
CCDC40-212ENST00000574799 HCFC1R1Q9NWW0 138 aa8.97□□□□□ -0.97
CCDC40-212ENST00000574799 CD84Q9UIB8 345 aa8.97□□□□□ -0.97
CCDC40-212ENST00000574799 A0A0B4J203 849 aa8.97□□□□□ -0.97
CCDC40-212ENST00000574799 RNASET2O00584 256 aaKnown RBP8.97□□□□□ -0.97
CCDC40-212ENST00000574799 SIGLEC6O43699 453 aa8.97□□□□□ -0.97
CCDC40-212ENST00000574799 NARSO43776 548 aaKnown RBP8.97□□□□□ -0.97
CCDC40-212ENST00000574799 PRAMEF2O60811 474 aa8.97□□□□□ -0.97
CCDC40-212ENST00000574799 SCN2BO60939 215 aa8.97□□□□□ -0.97
CCDC40-212ENST00000574799 SULT1A3P0DMM9 295 aa8.97□□□□□ -0.97
CCDC40-212ENST00000574799 SULT1A4P0DMN0 295 aa8.97□□□□□ -0.97
CCDC40-212ENST00000574799 PSMB1P20618 241 aaKnown RBP8.97□□□□□ -0.97
CCDC40-212ENST00000574799 ACRV1P26436 265 aa8.97□□□□□ -0.97
CCDC40-212ENST00000574799 RORAP35398 523 aa8.97□□□□□ -0.97
CCDC40-212ENST00000574799 RIPPLY1Q0D2K3 151 aa8.97□□□□□ -0.97
CCDC40-212ENST00000574799 C4orf46Q504U0 113 aa8.97□□□□□ -0.97
CCDC40-212ENST00000574799 C6orf132Q5T0Z8 1188 aa8.97□□□□□ -0.97
CCDC40-212ENST00000574799 SERPINA13PQ6UXR4 307 aa8.97□□□□□ -0.97
CCDC40-212ENST00000574799 TMUB2Q71RG4 321 aa8.97□□□□□ -0.97
CCDC40-212ENST00000574799 OAFQ86UD1 273 aa8.97□□□□□ -0.97
CCDC40-212ENST00000574799 NXPE1Q8N323 547 aa8.97□□□□□ -0.97
CCDC40-212ENST00000574799 GCDHQ92947 438 aaPredicted RBP8.97□□□□□ -0.97
CCDC40-212ENST00000574799 HGDQ93099 445 aa8.97□□□□□ -0.97
CCDC40-212ENST00000574799 MS4A3Q96HJ5 214 aa8.97□□□□□ -0.97
CCDC40-212ENST00000574799 ZC3H10Q96K80 434 aaKnown RBP8.97□□□□□ -0.97
CCDC40-212ENST00000574799 ARHGAP9Q9BRR9 750 aa8.97□□□□□ -0.97
CCDC40-212ENST00000574799 NOX3Q9HBY0 568 aa8.97□□□□□ -0.97
CCDC40-212ENST00000574799 PRMT8Q9NR22 394 aaPredicted RBP8.97□□□□□ -0.97
CCDC40-212ENST00000574799 SLCO1C1Q9NYB5 712 aa8.97□□□□□ -0.97
CCDC40-212ENST00000574799 COMMD9Q9P000 198 aa8.97□□□□□ -0.97
CCDC40-212ENST00000574799 CXXC1Q9P0U4 656 aaPredicted RBP8.97□□□□□ -0.97
CCDC40-212ENST00000574799 PRRC2BQ5JSZ5 2229 aaKnown RBP8.97□□□□□ -0.97
CCDC40-212ENST00000574799 CCDC88CQ9P219 2028 aa8.97□□□□□ -0.97
CCDC40-212ENST00000574799 TTLL8A6PVC2 850 aa8.96□□□□□ -0.97
CCDC40-212ENST00000574799 AGAP14A8MT82 685 aa8.96□□□□□ -0.97
CCDC40-212ENST00000574799 GCM2O75603 506 aaPredicted RBP8.96□□□□□ -0.97
CCDC40-212ENST00000574799 REM1O75628 298 aa8.96□□□□□ -0.97
CCDC40-212ENST00000574799 TIMP1P01033 207 aa8.96□□□□□ -0.97
CCDC40-212ENST00000574799 UCHL1P09936 223 aa8.96□□□□□ -0.97
CCDC40-212ENST00000574799 GSTM3P21266 225 aa8.96□□□□□ -0.97
CCDC40-212ENST00000574799 CD70P32970 193 aa8.96□□□□□ -0.97
CCDC40-212ENST00000574799 S100A12P80511 92 aa8.96□□□□□ -0.97
CCDC40-212ENST00000574799 MEF2AQ02078 507 aaPredicted RBP8.96□□□□□ -0.97
CCDC40-212ENST00000574799 MPEG1Q2M385 716 aa8.96□□□□□ -0.97
CCDC40-212ENST00000574799 GPRC6AQ5T6X5 926 aa8.96□□□□□ -0.97
CCDC40-212ENST00000574799 TFAP2EQ6VUC0 442 aa8.96□□□□□ -0.97
CCDC40-212ENST00000574799 OVCH2Q7RTZ1 564 aa8.96□□□□□ -0.97
CCDC40-212ENST00000574799 TRMT11Q7Z4G4 463 aaKnown RBP8.96□□□□□ -0.97
CCDC40-212ENST00000574799 RASGRP3Q8IV61 690 aa8.96□□□□□ -0.97
CCDC40-212ENST00000574799 ACBD7Q8N6N7 88 aa8.96□□□□□ -0.97
CCDC40-212ENST00000574799 PXT1Q8NFP0 134 aa8.96□□□□□ -0.97
CCDC40-212ENST00000574799 OR5J2Q8NH18 312 aa8.96□□□□□ -0.97
CCDC40-212ENST00000574799 MVB12BQ9H7P6 319 aa8.96□□□□□ -0.97
CCDC40-212ENST00000574799 MARK1Q9P0L2 795 aa8.96□□□□□ -0.97
CCDC40-212ENST00000574799 NUMA1Q14980 2115 aa8.96□□□□□ -0.97
CCDC40-212ENST00000574799 A8MVJ9 347 aa8.96□□□□□ -0.98
CCDC40-212ENST00000574799 HIDE1A8MVS5 230 aa8.96□□□□□ -0.98
CCDC40-212ENST00000574799 NDUFA2O43678 99 aa8.96□□□□□ -0.98
CCDC40-212ENST00000574799 SULT1B1O43704 296 aa8.96□□□□□ -0.98
CCDC40-212ENST00000574799 FABP1P07148 127 aa8.96□□□□□ -0.98
CCDC40-212ENST00000574799 RD3LP0DJH9 198 aa8.96□□□□□ -0.98
CCDC40-212ENST00000574799 CBSLP0DN79 551 aa8.96□□□□□ -0.98
CCDC40-212ENST00000574799 ARAFP10398 606 aa8.96□□□□□ -0.98
CCDC40-212ENST00000574799 ANXA7P20073 488 aaKnown RBP8.96□□□□□ -0.98
CCDC40-212ENST00000574799 CD9P21926 228 aa8.96□□□□□ -0.98
CCDC40-212ENST00000574799 MMP11P24347 488 aa8.96□□□□□ -0.98
CCDC40-212ENST00000574799 NOS3P29474 1203 aa8.96□□□□□ -0.98
CCDC40-212ENST00000574799 CBSP35520 551 aa8.96□□□□□ -0.98
CCDC40-212ENST00000574799 SEC61A1P61619 476 aaKnown RBP8.96□□□□□ -0.98
CCDC40-212ENST00000574799 BLOC1S1P78537 153 aa8.96□□□□□ -0.98
CCDC40-212ENST00000574799 MINDY4Q4G0A6 757 aa8.96□□□□□ -0.98
CCDC40-212ENST00000574799 ZNF385BQ569K4 471 aa8.96□□□□□ -0.98
CCDC40-212ENST00000574799 TCTN3Q6NUS6 607 aa8.96□□□□□ -0.98
CCDC40-212ENST00000574799 APOOLQ6UXV4 268 aa8.96□□□□□ -0.98
CCDC40-212ENST00000574799 SLC16A13Q7RTY0 426 aa8.96□□□□□ -0.98
CCDC40-212ENST00000574799 SYT9Q86SS6 491 aa8.96□□□□□ -0.98
CCDC40-212ENST00000574799 TMIEQ8NEW7 156 aa8.96□□□□□ -0.98
CCDC40-212ENST00000574799 SPATA5L1Q9BVQ7 753 aa8.96□□□□□ -0.98
CCDC40-212ENST00000574799 KCNK12Q9HB15 430 aa8.96□□□□□ -0.98
CCDC40-212ENST00000574799 SLC6A5Q9Y345 797 aa8.96□□□□□ -0.98
CCDC40-212ENST00000574799 KANTRA0A1W2PQU2 76 aa8.96□□□□□ -0.98
CCDC40-212ENST00000574799 PRAMEF25A6NGN4 478 aa8.96□□□□□ -0.98
CCDC40-212ENST00000574799 GOSR2O14653 212 aa8.96□□□□□ -0.98
CCDC40-212ENST00000574799 TXNL1O43396 289 aa8.96□□□□□ -0.98
CCDC40-212ENST00000574799 PRAF2O60831 178 aa8.96□□□□□ -0.98
CCDC40-212ENST00000574799 TBL1XO60907 577 aa8.96□□□□□ -0.98
CCDC40-212ENST00000574799 EGFP01133 1207 aa8.96□□□□□ -0.98
CCDC40-212ENST00000574799 LIMS3P0CW19 117 aa8.96□□□□□ -0.98
CCDC40-212ENST00000574799 LIMS4P0CW20 117 aa8.96□□□□□ -0.98
CCDC40-212ENST00000574799 AHRP35869 848 aa8.96□□□□□ -0.98
CCDC40-212ENST00000574799 RAD52P43351 418 aa8.96□□□□□ -0.98
CCDC40-212ENST00000574799 HLXQ14774 488 aaPredicted RBP8.96□□□□□ -0.98
CCDC40-212ENST00000574799 MPPE1Q53F39 396 aa8.96□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms