RNA–Protein interactions for RNA: ENST00000573994.1

RPA1-206, Transcript of replication protein A1, humanhuman

TSL 2

Gene RPA1, Length 844 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPA1-206ENST00000573994 GLYR1Q49A26 553 aaPredicted RBP9.01□□□□□ -0.97
RPA1-206ENST00000573994 EXOSC6Q5RKV6 272 aaKnown RBP9.01□□□□□ -0.97
RPA1-206ENST00000573994 PPP4R4Q6NUP7 873 aa9.01□□□□□ -0.97
RPA1-206ENST00000573994 P4HA3Q7Z4N8 544 aa9.01□□□□□ -0.97
RPA1-206ENST00000573994 RIMKLAQ8IXN7 391 aa9.01□□□□□ -0.97
RPA1-206ENST00000573994 CLECL1Q8IZS7 167 aa9.01□□□□□ -0.97
RPA1-206ENST00000573994 CLEC4FQ8N1N0 589 aa9.01□□□□□ -0.97
RPA1-206ENST00000573994 OR56A1Q8NGH5 318 aa9.01□□□□□ -0.97
RPA1-206ENST00000573994 OR5P2Q8WZ92 322 aa9.01□□□□□ -0.97
RPA1-206ENST00000573994 FIG4Q92562 907 aa9.01□□□□□ -0.97
RPA1-206ENST00000573994 UCN2Q96RP3 112 aa9.01□□□□□ -0.97
RPA1-206ENST00000573994 NPAS1Q99742 590 aa9.01□□□□□ -0.97
RPA1-206ENST00000573994 TM9SF2Q99805 663 aa9.01□□□□□ -0.97
RPA1-206ENST00000573994 GPATCH1Q9BRR8 931 aaKnown RBP9.01□□□□□ -0.97
RPA1-206ENST00000573994 DUSP26Q9BV47 211 aa9.01□□□□□ -0.97
RPA1-206ENST00000573994 SFXN3Q9BWM7 321 aa9.01□□□□□ -0.97
RPA1-206ENST00000573994 NUF2Q9BZD4 464 aa9.01□□□□□ -0.97
RPA1-206ENST00000573994 GRIP2Q9C0E4 1043 aa9.01□□□□□ -0.97
RPA1-206ENST00000573994 ACBD3Q9H3P7 528 aa9.01□□□□□ -0.97
RPA1-206ENST00000573994 TMEM185BQ9H7F4 350 aa9.01□□□□□ -0.97
RPA1-206ENST00000573994 GPATCH2Q9NW75 528 aa9.01□□□□□ -0.97
RPA1-206ENST00000573994 NOP53Q9NZM5 478 aaKnown RBP9.01□□□□□ -0.97
RPA1-206ENST00000573994 EPB41L3Q9Y2J2 1087 aaPredicted RBP9.01□□□□□ -0.97
RPA1-206ENST00000573994 RAP2CQ9Y3L5 183 aa9.01□□□□□ -0.97
RPA1-206ENST00000573994 ZNF337Q9Y3M9 751 aa9.01□□□□□ -0.97
RPA1-206ENST00000573994 IGLV3-32A0A0A0MS00 114 aa9□□□□□ -0.97
RPA1-206ENST00000573994 RNF103-CHMP3A0A140T963 221 aa9□□□□□ -0.97
RPA1-206ENST00000573994 A0A1W2PNV4 684 aa9□□□□□ -0.97
RPA1-206ENST00000573994 ALG1L2C9J202 215 aa9□□□□□ -0.97
RPA1-206ENST00000573994 SCDO00767 359 aa9□□□□□ -0.97
RPA1-206ENST00000573994 OIP5O43482 229 aa9□□□□□ -0.97
RPA1-206ENST00000573994 HCRTR2O43614 444 aa9□□□□□ -0.97
RPA1-206ENST00000573994 NDUFB5O43674 189 aa9□□□□□ -0.97
RPA1-206ENST00000573994 RCBTB2O95199 551 aa9□□□□□ -0.97
RPA1-206ENST00000573994 OPN1LWP04000 364 aa9□□□□□ -0.97
RPA1-206ENST00000573994 NGFRP08138 427 aa9□□□□□ -0.97
RPA1-206ENST00000573994 PEPDP12955 493 aa9□□□□□ -0.97
RPA1-206ENST00000573994 HPGDP15428 266 aa9□□□□□ -0.97
RPA1-206ENST00000573994 CCT3P49368 545 aaKnown RBP9□□□□□ -0.97
RPA1-206ENST00000573994 SUCLG1P53597 346 aaKnown RBP9□□□□□ -0.97
RPA1-206ENST00000573994 NME5P56597 212 aa9□□□□□ -0.97
RPA1-206ENST00000573994 EEFSECP57772 596 aaKnown RBP9□□□□□ -0.97
RPA1-206ENST00000573994 HBA1P69905 142 aa9□□□□□ -0.97
RPA1-206ENST00000573994 SIRPAP78324 504 aa9□□□□□ -0.97
RPA1-206ENST00000573994 OCRLQ01968 901 aa9□□□□□ -0.97
RPA1-206ENST00000573994 EMX2Q04743 252 aa9□□□□□ -0.97
RPA1-206ENST00000573994 C17orf67Q0P5P2 114 aa9□□□□□ -0.97
RPA1-206ENST00000573994 BST1Q10588 318 aa9□□□□□ -0.97
RPA1-206ENST00000573994 NDUFAF6Q330K2 333 aa9□□□□□ -0.97
RPA1-206ENST00000573994 LSM12Q3MHD2 195 aaKnown RBP9□□□□□ -0.97
RPA1-206ENST00000573994 FLYWCH1Q4VC44 716 aa9□□□□□ -0.97
RPA1-206ENST00000573994 TNFAIP8L3Q5GJ75 292 aa9□□□□□ -0.97
RPA1-206ENST00000573994 HHATQ5VTY9 493 aa9□□□□□ -0.97
RPA1-206ENST00000573994 OR4F3Q6IEY1 312 aa9□□□□□ -0.97
RPA1-206ENST00000573994 CDC73Q6P1J9 531 aa9□□□□□ -0.97
RPA1-206ENST00000573994 CHMP1BQ7LBR1 199 aa9□□□□□ -0.97
RPA1-206ENST00000573994 ANKRD46Q86W74 232 aa9□□□□□ -0.97
RPA1-206ENST00000573994 LRRC34Q8IZ02 419 aa9□□□□□ -0.97
RPA1-206ENST00000573994 CNEP1R1Q8N9A8 125 aa9□□□□□ -0.97
RPA1-206ENST00000573994 OR5D16Q8NGK9 328 aa9□□□□□ -0.97
RPA1-206ENST00000573994 FNDC9Q8TBE3 224 aa9□□□□□ -0.97
RPA1-206ENST00000573994 FAM110BQ8TC76 370 aa9□□□□□ -0.97
RPA1-206ENST00000573994 SFXN5Q8TD22 340 aa9□□□□□ -0.97
RPA1-206ENST00000573994 COQ8BQ96D53 544 aa9□□□□□ -0.97
RPA1-206ENST00000573994 PGM2Q96G03 612 aa9□□□□□ -0.97
RPA1-206ENST00000573994 ZNF845Q96IR2 970 aaPredicted RBP9□□□□□ -0.97
RPA1-206ENST00000573994 PIGQQ9BRB3 760 aa9□□□□□ -0.97
RPA1-206ENST00000573994 RBM24Q9BX46 236 aaKnown RBP9□□□□□ -0.97
RPA1-206ENST00000573994 BTBD2Q9BX70 525 aa9□□□□□ -0.97
RPA1-206ENST00000573994 PINK1Q9BXM7 581 aa9□□□□□ -0.97
RPA1-206ENST00000573994 ACTRT3Q9BYD9 372 aa9□□□□□ -0.97
RPA1-206ENST00000573994 BHLHE41Q9C0J9 482 aaPredicted RBP9□□□□□ -0.97
RPA1-206ENST00000573994 SERHL2Q9H4I8 314 aa9□□□□□ -0.97
RPA1-206ENST00000573994 NEUROD4Q9HD90 331 aa9□□□□□ -0.97
RPA1-206ENST00000573994 DUSP22Q9NRW4 184 aa9□□□□□ -0.97
RPA1-206ENST00000573994 PNPOQ9NVS9 261 aa9□□□□□ -0.97
RPA1-206ENST00000573994 DNAJB12Q9NXW2 375 aaKnown RBP9□□□□□ -0.97
RPA1-206ENST00000573994 GALNT8Q9NY28 637 aa9□□□□□ -0.97
RPA1-206ENST00000573994 ASIC5Q9NY37 505 aa9□□□□□ -0.97
RPA1-206ENST00000573994 STOML1Q9UBI4 398 aa9□□□□□ -0.97
RPA1-206ENST00000573994 MARCOQ9UEW3 520 aaPredicted RBP9□□□□□ -0.97
RPA1-206ENST00000573994 FAF1Q9UNN5 650 aaPredicted RBP9□□□□□ -0.97
RPA1-206ENST00000573994 KCNE3Q9Y6H6 103 aa9□□□□□ -0.97
RPA1-206ENST00000573994 HRNRQ86YZ3 2850 aaPredicted RBP9□□□□□ -0.97
RPA1-206ENST00000573994 F8P00451 2351 aa9□□□□□ -0.97
RPA1-206ENST00000573994 HCFC1P51610 2035 aa9□□□□□ -0.97
RPA1-206ENST00000573994 FREM3P0C091 2139 aa8.99□□□□□ -0.97
RPA1-206ENST00000573994 TNFSF12-TNFSF13A0A0A6YY99 330 aa8.99□□□□□ -0.97
RPA1-206ENST00000573994 TMEM120BA0PK00 339 aa8.99□□□□□ -0.97
RPA1-206ENST00000573994 C9JVG2 144 aa8.99□□□□□ -0.97
RPA1-206ENST00000573994 EIF1AYO14602 144 aaKnown RBP8.99□□□□□ -0.97
RPA1-206ENST00000573994 TNFSF13O75888 250 aa8.99□□□□□ -0.97
RPA1-206ENST00000573994 SMNDC1O75940 238 aaKnown RBP eCLIP8.99□□□□□ -0.97
RPA1-206ENST00000573994 KRT16P08779 473 aa8.99□□□□□ -0.97
RPA1-206ENST00000573994 ATP6V1C1P21283 382 aa8.99□□□□□ -0.97
RPA1-206ENST00000573994 TBXA2RP21731 343 aa8.99□□□□□ -0.97
RPA1-206ENST00000573994 RPL14P50914 215 aaKnown RBP8.99□□□□□ -0.97
RPA1-206ENST00000573994 ZNF41P51814 821 aaPredicted RBP8.99□□□□□ -0.97
RPA1-206ENST00000573994 CASP9P55211 416 aa8.99□□□□□ -0.97
RPA1-206ENST00000573994 CLDN8P56748 225 aa8.99□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms