RNA–Protein interactions for RNA: ENST00000573872.5

TRAP1-208, Transcript of TNF receptor associated protein 1, human

TSL 3

Gene TRAP1, Length 656 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TRAP1-208	ENST00000573872	GATS	Q8NAP1	163 aa		11.96	□□□□□ -0.49
TRAP1-208	ENST00000573872	PCYOX1L	Q8NBM8	494 aa		11.96	□□□□□ -0.49
TRAP1-208	ENST00000573872	FAM71C	Q8NEG0	241 aa		11.96	□□□□□ -0.49
TRAP1-208	ENST00000573872	FAM83F	Q8NEG4	500 aa	Predicted RBP	11.96	□□□□□ -0.49
TRAP1-208	ENST00000573872	OR8J3	Q8NGG0	315 aa		11.96	□□□□□ -0.49
TRAP1-208	ENST00000573872	NEIL3	Q8TAT5	605 aa		11.96	□□□□□ -0.49
TRAP1-208	ENST00000573872	MAL2	Q969L2	176 aa		11.96	□□□□□ -0.49
TRAP1-208	ENST00000573872	TREX2	Q9BQ50	279 aa	Predicted RBP	11.96	□□□□□ -0.49
TRAP1-208	ENST00000573872	KLHDC3	Q9BQ90	382 aa		11.96	□□□□□ -0.49
TRAP1-208	ENST00000573872	QRSL1	Q9H0R6	528 aa	Known RBP	11.96	□□□□□ -0.49
TRAP1-208	ENST00000573872	SLC6A15	Q9H2J7	730 aa		11.96	□□□□□ -0.49
TRAP1-208	ENST00000573872	DSN1	Q9H410	356 aa		11.96	□□□□□ -0.49
TRAP1-208	ENST00000573872	MTHFD2L	Q9H903	347 aa	Predicted RBP	11.96	□□□□□ -0.49
TRAP1-208	ENST00000573872	NANOG	Q9H9S0	305 aa		11.96	□□□□□ -0.49
TRAP1-208	ENST00000573872	HHATL	Q9HCP6	504 aa		11.96	□□□□□ -0.49
TRAP1-208	ENST00000573872	BCL2L10	Q9HD36	194 aa		11.96	□□□□□ -0.49
TRAP1-208	ENST00000573872	CALML5	Q9NZT1	146 aa		11.96	□□□□□ -0.49
TRAP1-208	ENST00000573872	SUCO	Q9UBS9	1254 aa	Known RBP	11.96	□□□□□ -0.49
TRAP1-208	ENST00000573872	L3MBTL1	Q9Y468	752 aa		11.96	□□□□□ -0.49
TRAP1-208	ENST00000573872	GTF3C1	Q12789	2109 aa		11.96	□□□□□ -0.5
TRAP1-208	ENST00000573872	RP1L1	Q8IWN7	2480 aa	Predicted RBP	11.95	□□□□□ -0.5
TRAP1-208	ENST00000573872	TRGV5	A0A0B4J1U4	118 aa		11.95	□□□□□ -0.5
TRAP1-208	ENST00000573872	ZNHIT1	O43257	154 aa		11.95	□□□□□ -0.5
TRAP1-208	ENST00000573872	OIP5	O43482	229 aa		11.95	□□□□□ -0.5
TRAP1-208	ENST00000573872	DCTN3	O75935	186 aa		11.95	□□□□□ -0.5
TRAP1-208	ENST00000573872	WISP1	O95388	367 aa		11.95	□□□□□ -0.5
TRAP1-208	ENST00000573872	STS	P08842	583 aa		11.95	□□□□□ -0.5
TRAP1-208	ENST00000573872	SLC6A2	P23975	617 aa		11.95	□□□□□ -0.5
TRAP1-208	ENST00000573872	MSX1	P28360	303 aa		11.95	□□□□□ -0.5
TRAP1-208	ENST00000573872	PGM1	P36871	562 aa		11.95	□□□□□ -0.5
TRAP1-208	ENST00000573872	DSCR4	P56555	118 aa	Predicted RBP	11.95	□□□□□ -0.5
TRAP1-208	ENST00000573872	HPCA	P84074	193 aa		11.95	□□□□□ -0.5
TRAP1-208	ENST00000573872	ZNF117	Q03924	483 aa		11.95	□□□□□ -0.5
TRAP1-208	ENST00000573872	GANAB	Q14697	944 aa	Known RBP	11.95	□□□□□ -0.5
TRAP1-208	ENST00000573872	NHSL2	Q5HYW2	709 aa		11.95	□□□□□ -0.5
TRAP1-208	ENST00000573872	CBLN3	Q6UW01	205 aa		11.95	□□□□□ -0.5
TRAP1-208	ENST00000573872	SERPINA11	Q86U17	422 aa		11.95	□□□□□ -0.5
TRAP1-208	ENST00000573872	PTOV1	Q86YD1	416 aa		11.95	□□□□□ -0.5
TRAP1-208	ENST00000573872	OR4K17	Q8NGC6	315 aa		11.95	□□□□□ -0.5
TRAP1-208	ENST00000573872	PHOSPHO1	Q8TCT1	267 aa		11.95	□□□□□ -0.5
TRAP1-208	ENST00000573872	CMTM5	Q96DZ9	223 aa		11.95	□□□□□ -0.5
TRAP1-208	ENST00000573872	C1GALT1C1	Q96EU7	318 aa		11.95	□□□□□ -0.5
TRAP1-208	ENST00000573872	LRRC37B	Q96QE4	947 aa		11.95	□□□□□ -0.5
TRAP1-208	ENST00000573872	GPATCH1	Q9BRR8	931 aa	Known RBP	11.95	□□□□□ -0.5
TRAP1-208	ENST00000573872	GID8	Q9NWU2	228 aa		11.95	□□□□□ -0.5
TRAP1-208	ENST00000573872	SPRR3	Q9UBC9	169 aa		11.95	□□□□□ -0.5
TRAP1-208	ENST00000573872	ICAM5	Q9UMF0	924 aa		11.95	□□□□□ -0.5
TRAP1-208	ENST00000573872		A0A0G2JPF8	293 aa		11.94	□□□□□ -0.5
TRAP1-208	ENST00000573872	OR14I1	A6ND48	311 aa		11.94	□□□□□ -0.5
TRAP1-208	ENST00000573872	HNRNPCL2	B2RXH8	293 aa		11.94	□□□□□ -0.5
TRAP1-208	ENST00000573872	HNRNPCL3	B7ZW38	293 aa		11.94	□□□□□ -0.5
TRAP1-208	ENST00000573872		H3BNH8	94 aa		11.94	□□□□□ -0.5
TRAP1-208	ENST00000573872	SLC19A2	O60779	497 aa		11.94	□□□□□ -0.5
TRAP1-208	ENST00000573872	HNRNPCL1	O60812	293 aa	Known RBP	11.94	□□□□□ -0.5
TRAP1-208	ENST00000573872	DNAJA2	O60884	412 aa		11.94	□□□□□ -0.5
TRAP1-208	ENST00000573872	BCAS1	O75363	584 aa	Predicted RBP	11.94	□□□□□ -0.5
TRAP1-208	ENST00000573872	TRAPPC6A	O75865	159 aa		11.94	□□□□□ -0.5
TRAP1-208	ENST00000573872	PGM3	O95394	542 aa		11.94	□□□□□ -0.5
TRAP1-208	ENST00000573872	HNRNPCL4	P0DMR1	293 aa		11.94	□□□□□ -0.5
TRAP1-208	ENST00000573872	DPP4	P27487	766 aa		11.94	□□□□□ -0.5
TRAP1-208	ENST00000573872	RNF144A	P50876	292 aa	Predicted RBP	11.94	□□□□□ -0.5
TRAP1-208	ENST00000573872	GFRA1	P56159	465 aa		11.94	□□□□□ -0.5
TRAP1-208	ENST00000573872	B3GALT5-AS1	P59052	145 aa		11.94	□□□□□ -0.5
TRAP1-208	ENST00000573872	CDK6	Q00534	326 aa		11.94	□□□□□ -0.5
TRAP1-208	ENST00000573872	GNA13	Q14344	377 aa		11.94	□□□□□ -0.5
TRAP1-208	ENST00000573872	ZNF630	Q2M218	657 aa	Predicted RBP	11.94	□□□□□ -0.5
TRAP1-208	ENST00000573872	TMEM44	Q2T9K0	475 aa		11.94	□□□□□ -0.5
TRAP1-208	ENST00000573872	EIF2S3L	Q2VIR3	472 aa	Known RBP	11.94	□□□□□ -0.5
TRAP1-208	ENST00000573872	NDUFAF6	Q330K2	333 aa		11.94	□□□□□ -0.5
TRAP1-208	ENST00000573872	RABL3	Q5HYI8	236 aa		11.94	□□□□□ -0.5
TRAP1-208	ENST00000573872	RPS26P11	Q5JNZ5	115 aa	Predicted RBP	11.94	□□□□□ -0.5
TRAP1-208	ENST00000573872	WIPI1	Q5MNZ9	446 aa	Predicted RBP	11.94	□□□□□ -0.5
TRAP1-208	ENST00000573872	HACD2	Q6Y1H2	254 aa		11.94	□□□□□ -0.5
TRAP1-208	ENST00000573872	HMGN2P46	Q86SG4	172 aa		11.94	□□□□□ -0.5
TRAP1-208	ENST00000573872	YRDC	Q86U90	279 aa	Known RBP	11.94	□□□□□ -0.5
TRAP1-208	ENST00000573872	CALHM3	Q86XJ0	350 aa		11.94	□□□□□ -0.5
TRAP1-208	ENST00000573872	FITM2	Q8N6M3	262 aa		11.94	□□□□□ -0.5
TRAP1-208	ENST00000573872	ZNF614	Q8N883	585 aa		11.94	□□□□□ -0.5
TRAP1-208	ENST00000573872	CCDC197	Q8NCU1	140 aa		11.94	□□□□□ -0.5
TRAP1-208	ENST00000573872	B4GALNT2	Q8NHY0	566 aa		11.94	□□□□□ -0.5
TRAP1-208	ENST00000573872	BBS10	Q8TAM1	723 aa		11.94	□□□□□ -0.5
TRAP1-208	ENST00000573872	THUMPD3	Q9BV44	507 aa	Known RBP	11.94	□□□□□ -0.5
TRAP1-208	ENST00000573872	RSPO3	Q9BXY4	272 aa	Predicted RBP	11.94	□□□□□ -0.5
TRAP1-208	ENST00000573872	PTGES2	Q9H7Z7	377 aa		11.94	□□□□□ -0.5
TRAP1-208	ENST00000573872	CARD8	Q9Y2G2	431 aa		11.94	□□□□□ -0.5
TRAP1-208	ENST00000573872	HEATR5A	Q86XA9	2040 aa		11.94	□□□□□ -0.5
TRAP1-208	ENST00000573872	MED12	Q93074	2177 aa		11.94	□□□□□ -0.5
TRAP1-208	ENST00000573872	TMEM247	A6NEH6	219 aa		11.93	□□□□□ -0.5
TRAP1-208	ENST00000573872	CLDN24	A6NM45	220 aa		11.93	□□□□□ -0.5
TRAP1-208	ENST00000573872	AIM2	O14862	343 aa		11.93	□□□□□ -0.5
TRAP1-208	ENST00000573872	ZNF264	O43296	627 aa		11.93	□□□□□ -0.5
TRAP1-208	ENST00000573872	HCRTR2	O43614	444 aa		11.93	□□□□□ -0.5
TRAP1-208	ENST00000573872	EIF4E2	O60573	245 aa	Known RBP	11.93	□□□□□ -0.5
TRAP1-208	ENST00000573872	DBI	P07108	87 aa	Known RBP	11.93	□□□□□ -0.5
TRAP1-208	ENST00000573872	UBL4A	P11441	157 aa		11.93	□□□□□ -0.5
TRAP1-208	ENST00000573872	NID1	P14543	1247 aa		11.93	□□□□□ -0.5
TRAP1-208	ENST00000573872	ETS2	P15036	469 aa		11.93	□□□□□ -0.5
TRAP1-208	ENST00000573872	PTGS2	P35354	604 aa		11.93	□□□□□ -0.5
TRAP1-208	ENST00000573872	P2RX1	P51575	399 aa		11.93	□□□□□ -0.5
TRAP1-208	ENST00000573872	SUMO3	P55854	103 aa	Predicted RBP	11.93	□□□□□ -0.5

Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms