RNA–Protein interactions for RNA: ENST00000573852.5

SCARF1-206, Transcript of scavenger receptor class F member 1, humanhuman

TSL 1 (best)

Gene SCARF1, Length 2,698 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-206ENST00000573852 ZNF136P52737 540 aa17.75■□□□□ 0.43
SCARF1-206ENST00000573852 SNRPNP63162 240 aaKnown RBP17.75■□□□□ 0.43
SCARF1-206ENST00000573852 ARL9Q6T311 187 aa17.75■□□□□ 0.43
SCARF1-206ENST00000573852 OAFQ86UD1 273 aa17.75■□□□□ 0.43
SCARF1-206ENST00000573852 GID4Q8IVV7 300 aa17.75■□□□□ 0.43
SCARF1-206ENST00000573852 OR2L3Q8NG85 312 aa17.75■□□□□ 0.43
SCARF1-206ENST00000573852 OR5W2Q8NH69 310 aa17.75■□□□□ 0.43
SCARF1-206ENST00000573852 CLIP3Q96DZ5 547 aa17.75■□□□□ 0.43
SCARF1-206ENST00000573852 PRSS27Q9BQR3 290 aa17.75■□□□□ 0.43
SCARF1-206ENST00000573852 PRSS16Q9NQE7 514 aa17.75■□□□□ 0.43
SCARF1-206ENST00000573852 NCKAP1Q9Y2A7 1128 aa17.75■□□□□ 0.43
SCARF1-206ENST00000573852 C1QTNF3-AMACRE9PGA6 284 aa17.74■□□□□ 0.43
SCARF1-206ENST00000573852 EEF1E1O43324 174 aaKnown RBP17.74■□□□□ 0.43
SCARF1-206ENST00000573852 CHP2O43745 196 aa17.74■□□□□ 0.43
SCARF1-206ENST00000573852 NFATC1O95644 943 aa17.74■□□□□ 0.43
SCARF1-206ENST00000573852 DRD3P35462 400 aa17.74■□□□□ 0.43
SCARF1-206ENST00000573852 KRT33BQ14525 404 aa17.74■□□□□ 0.43
SCARF1-206ENST00000573852 SUSD6Q92537 303 aa17.74■□□□□ 0.43
SCARF1-206ENST00000573852 HYLS1Q96M11 299 aa17.74■□□□□ 0.43
SCARF1-206ENST00000573852 ABHD1Q96SE0 405 aa17.74■□□□□ 0.43
SCARF1-206ENST00000573852 C1QTNF2Q9BXJ5 285 aa17.74■□□□□ 0.43
SCARF1-206ENST00000573852 DAPL1A0PJW8 107 aa17.74■□□□□ 0.43
SCARF1-206ENST00000573852 UNC119BA6NIH7 251 aa17.74■□□□□ 0.43
SCARF1-206ENST00000573852 FKTNO75072 461 aa17.74■□□□□ 0.43
SCARF1-206ENST00000573852 PRG2P13727 222 aa17.74■□□□□ 0.43
SCARF1-206ENST00000573852 AHCYP23526 432 aa17.74■□□□□ 0.43
SCARF1-206ENST00000573852 TALDO1P37837 337 aa17.74■□□□□ 0.43
SCARF1-206ENST00000573852 PITPNBP48739 271 aa17.74■□□□□ 0.43
SCARF1-206ENST00000573852 SRP9P49458 86 aaKnown RBP17.74■□□□□ 0.43
SCARF1-206ENST00000573852 E2F1Q01094 437 aa17.74■□□□□ 0.43
SCARF1-206ENST00000573852 BICRALQ6AI39 1079 aa17.74■□□□□ 0.43
SCARF1-206ENST00000573852 MFSD12Q6NUT3 480 aa17.74■□□□□ 0.43
SCARF1-206ENST00000573852 WDR88Q6ZMY6 472 aa17.74■□□□□ 0.43
SCARF1-206ENST00000573852 OR10H4Q8NGA5 316 aa17.74■□□□□ 0.43
SCARF1-206ENST00000573852 BRIX1Q8TDN6 353 aaKnown RBP17.74■□□□□ 0.43
SCARF1-206ENST00000573852 KISS1RQ969F8 398 aaPredicted RBP17.74■□□□□ 0.43
SCARF1-206ENST00000573852 COL26A1Q96A83 441 aa17.74■□□□□ 0.43
SCARF1-206ENST00000573852 RAB7BQ96AH8 199 aa17.74■□□□□ 0.43
SCARF1-206ENST00000573852 AHCYL2Q96HN2 611 aaKnown RBP17.74■□□□□ 0.43
SCARF1-206ENST00000573852 MTHFD2LQ9H903 347 aaPredicted RBP17.74■□□□□ 0.43
SCARF1-206ENST00000573852 FOLH1BQ9HBA9 442 aa17.74■□□□□ 0.43
SCARF1-206ENST00000573852 TRAV6A0A075B6T7 132 aa17.73■□□□□ 0.43
SCARF1-206ENST00000573852 ASGR2P07307 311 aa17.73■□□□□ 0.43
SCARF1-206ENST00000573852 CCL5P13501 91 aa17.73■□□□□ 0.43
SCARF1-206ENST00000573852 MAKP20794 623 aa17.73■□□□□ 0.43
SCARF1-206ENST00000573852 BTN3A2P78410 334 aa17.73■□□□□ 0.43
SCARF1-206ENST00000573852 KLHL12Q53G59 568 aa17.73■□□□□ 0.43
SCARF1-206ENST00000573852 SFXN4Q6P4A7 337 aa17.73■□□□□ 0.43
SCARF1-206ENST00000573852 PFN4Q8NHR9 129 aa17.73■□□□□ 0.43
SCARF1-206ENST00000573852 WDR26Q9H7D7 661 aa17.73■□□□□ 0.43
SCARF1-206ENST00000573852 ATP13A2Q9NQ11 1180 aa17.73■□□□□ 0.43
SCARF1-206ENST00000573852 C20orf141Q9NUB4 165 aa17.73■□□□□ 0.43
SCARF1-206ENST00000573852 TEKT2Q9UIF3 430 aa17.73■□□□□ 0.43
SCARF1-206ENST00000573852 WDR45Q9Y484 360 aa17.73■□□□□ 0.43
SCARF1-206ENST00000573852 BHLHE40O14503 412 aa17.73■□□□□ 0.43
SCARF1-206ENST00000573852 IFI30P13284 250 aa17.73■□□□□ 0.43
SCARF1-206ENST00000573852 RBMS1P29558 406 aaKnown RBP17.73■□□□□ 0.43
SCARF1-206ENST00000573852 GALEQ14376 348 aa17.73■□□□□ 0.43
SCARF1-206ENST00000573852 DEFB115Q30KQ5 88 aa17.73■□□□□ 0.43
SCARF1-206ENST00000573852 ANKRD54Q6NXT1 300 aa17.73■□□□□ 0.43
SCARF1-206ENST00000573852 CDC73Q6P1J9 531 aa17.73■□□□□ 0.43
SCARF1-206ENST00000573852 GHDCQ8N2G8 530 aa17.73■□□□□ 0.43
SCARF1-206ENST00000573852 KCT2Q8NC54 265 aa17.73■□□□□ 0.43
SCARF1-206ENST00000573852 FANK1Q8TC84 345 aa17.73■□□□□ 0.43
SCARF1-206ENST00000573852 POF1BQ8WVV4 589 aa17.73■□□□□ 0.43
SCARF1-206ENST00000573852 HSD17B8Q92506 261 aa17.73■□□□□ 0.43
SCARF1-206ENST00000573852 PHF21AQ96BD5 680 aa17.73■□□□□ 0.43
SCARF1-206ENST00000573852 TRIM36Q9NQ86 728 aa17.73■□□□□ 0.43
SCARF1-206ENST00000573852 SIDT1Q9NXL6 827 aaKnown RBP17.73■□□□□ 0.43
SCARF1-206ENST00000573852 INSL6Q9Y581 213 aa17.73■□□□□ 0.43
SCARF1-206ENST00000573852 CACNG2Q9Y698 323 aa17.73■□□□□ 0.43
SCARF1-206ENST00000573852 A0A0G2JK05 382 aa17.72■□□□□ 0.43
SCARF1-206ENST00000573852 SCAMP1O15126 338 aa17.72■□□□□ 0.43
SCARF1-206ENST00000573852 NARSO43776 548 aaKnown RBP17.72■□□□□ 0.43
SCARF1-206ENST00000573852 TSC22D2O75157 780 aa17.72■□□□□ 0.43
SCARF1-206ENST00000573852 NPR2P20594 1047 aa17.72■□□□□ 0.43
SCARF1-206ENST00000573852 TEAD1P28347 426 aa17.72■□□□□ 0.43
SCARF1-206ENST00000573852 SLC3A1Q07837 685 aa17.72■□□□□ 0.43
SCARF1-206ENST00000573852 CCNJQ5T5M9 372 aa17.72■□□□□ 0.43
SCARF1-206ENST00000573852 PRPF38BQ5VTL8 546 aaKnown RBP17.72■□□□□ 0.43
SCARF1-206ENST00000573852 RFPL4BQ6ZWI9 263 aa17.72■□□□□ 0.43
SCARF1-206ENST00000573852 KRT74Q7RTS7 529 aa17.72■□□□□ 0.43
SCARF1-206ENST00000573852 NRROSQ86YC3 692 aa17.72■□□□□ 0.43
SCARF1-206ENST00000573852 FAM109AQ8N4B1 249 aa17.72■□□□□ 0.43
SCARF1-206ENST00000573852 SMAP2Q8WU79 429 aaPredicted RBP17.72■□□□□ 0.43
SCARF1-206ENST00000573852 PTP4A1Q93096 173 aa17.72■□□□□ 0.43
SCARF1-206ENST00000573852 C10orf90Q96M02 699 aa17.72■□□□□ 0.43
SCARF1-206ENST00000573852 MED28Q9H204 178 aa17.72■□□□□ 0.43
SCARF1-206ENST00000573852 ZNF223Q9UK11 482 aaPredicted RBP17.72■□□□□ 0.43
SCARF1-206ENST00000573852 MRPL3P09001 348 aaKnown RBP17.72■□□□□ 0.43
SCARF1-206ENST00000573852 ACSL1P33121 698 aa17.72■□□□□ 0.43
SCARF1-206ENST00000573852 IRF4Q15306 451 aa17.72■□□□□ 0.43
SCARF1-206ENST00000573852 NTRK2Q16620 822 aa17.72■□□□□ 0.43
SCARF1-206ENST00000573852 SLC25A35Q3KQZ1 300 aa17.72■□□□□ 0.43
SCARF1-206ENST00000573852 CEACAM19Q7Z692 300 aa17.72■□□□□ 0.43
SCARF1-206ENST00000573852 C17orf47Q8NEP4 570 aa17.72■□□□□ 0.43
SCARF1-206ENST00000573852 TOR1AIP2Q8NFQ8 470 aa17.72■□□□□ 0.43
SCARF1-206ENST00000573852 ANGPTL6Q8NI99 470 aa17.72■□□□□ 0.43
SCARF1-206ENST00000573852 KCTD12Q96CX2 325 aaKnown RBP17.72■□□□□ 0.43
SCARF1-206ENST00000573852 GHITMQ9H3K2 345 aa17.72■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms