RNA–Protein interactions for RNA: ENST00000571272.5

SCARF1-205, Transcript of scavenger receptor class F member 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCARF1, Length 2,871 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-205ENST00000571272 OR11H4Q8NGC9 324 aa16.27■□□□□ 0.19
SCARF1-205ENST00000571272 TRMT10AQ8TBZ6 339 aaKnown RBP16.27■□□□□ 0.19
SCARF1-205ENST00000571272 OR51V1Q9H2C8 321 aa16.27■□□□□ 0.19
SCARF1-205ENST00000571272 MRPS30Q9NP92 439 aaKnown RBP16.27■□□□□ 0.19
SCARF1-205ENST00000571272 NLGN3Q9NZ94 848 aa16.27■□□□□ 0.19
SCARF1-205ENST00000571272 CES1P1Q9UKY3 287 aa16.27■□□□□ 0.19
SCARF1-205ENST00000571272 KCNK6Q9Y257 313 aa16.27■□□□□ 0.19
SCARF1-205ENST00000571272 A0A1W2PPK0 400 aa16.26■□□□□ 0.19
SCARF1-205ENST00000571272 SLC9B1P1A6NJY1 282 aa16.26■□□□□ 0.19
SCARF1-205ENST00000571272 OR52A4PA6NMU1 304 aa16.26■□□□□ 0.19
SCARF1-205ENST00000571272 P2RY2P41231 377 aa16.26■□□□□ 0.19
SCARF1-205ENST00000571272 TMEM35AQ53FP2 167 aa16.26■□□□□ 0.19
SCARF1-205ENST00000571272 SDE2Q6IQ49 451 aa16.26■□□□□ 0.19
SCARF1-205ENST00000571272 LYPD4Q6UWN0 246 aa16.26■□□□□ 0.19
SCARF1-205ENST00000571272 SLC39A5Q6ZMH5 540 aa16.26■□□□□ 0.19
SCARF1-205ENST00000571272 GANCQ8TET4 914 aa16.26■□□□□ 0.19
SCARF1-205ENST00000571272 PCNPQ8WW12 178 aaKnown RBP16.26■□□□□ 0.19
SCARF1-205ENST00000571272 CDS1Q92903 461 aa16.26■□□□□ 0.19
SCARF1-205ENST00000571272 DACT3Q96B18 629 aaPredicted RBP16.26■□□□□ 0.19
SCARF1-205ENST00000571272 PITHD1Q9GZP4 211 aaPredicted RBP16.26■□□□□ 0.19
SCARF1-205ENST00000571272 ANKRD19PQ9H560 264 aa16.26■□□□□ 0.19
SCARF1-205ENST00000571272 ZFP64Q9NPA5 681 aa16.26■□□□□ 0.19
SCARF1-205ENST00000571272 ATP13A2Q9NQ11 1180 aa16.26■□□□□ 0.19
SCARF1-205ENST00000571272 CHD7Q9P2D1 2997 aa16.26■□□□□ 0.19
SCARF1-205ENST00000571272 EDDM13A0A1B0GTR0 161 aa16.26■□□□□ 0.19
SCARF1-205ENST00000571272 BTN3A3O00478 584 aa16.26■□□□□ 0.19
SCARF1-205ENST00000571272 STOMP27105 288 aa16.26■□□□□ 0.19
SCARF1-205ENST00000571272 PRKAR1BP31321 381 aa16.26■□□□□ 0.19
SCARF1-205ENST00000571272 VIPR2P41587 438 aa16.26■□□□□ 0.19
SCARF1-205ENST00000571272 SRP54P61011 504 aaKnown RBP16.26■□□□□ 0.19
SCARF1-205ENST00000571272 KRT33BQ14525 404 aa16.26■□□□□ 0.19
SCARF1-205ENST00000571272 PUS10Q3MIT2 529 aaKnown RBP16.26■□□□□ 0.19
SCARF1-205ENST00000571272 PRAMEF8Q5VWM4 474 aa16.26■□□□□ 0.19
SCARF1-205ENST00000571272 PRAMEF7Q5VXH5 474 aa16.26■□□□□ 0.19
SCARF1-205ENST00000571272 MRM1Q6IN84 353 aaKnown RBP16.26■□□□□ 0.19
SCARF1-205ENST00000571272 MTFR2Q6P444 385 aa16.26■□□□□ 0.19
SCARF1-205ENST00000571272 NIPAL3Q6P499 406 aa16.26■□□□□ 0.19
SCARF1-205ENST00000571272 FAM111BQ6SJ93 734 aa16.26■□□□□ 0.19
SCARF1-205ENST00000571272 MEPCEQ7L2J0 689 aaKnown RBP16.26■□□□□ 0.19
SCARF1-205ENST00000571272 ANKRD33Q7Z3H0 272 aa16.26■□□□□ 0.19
SCARF1-205ENST00000571272 SYT9Q86SS6 491 aa16.26■□□□□ 0.19
SCARF1-205ENST00000571272 SLC38A6Q8IZM9 456 aa16.26■□□□□ 0.19
SCARF1-205ENST00000571272 FBXL6Q8N531 539 aa16.26■□□□□ 0.19
SCARF1-205ENST00000571272 C17orf47Q8NEP4 570 aa16.26■□□□□ 0.19
SCARF1-205ENST00000571272 BEST4Q8NFU0 473 aa16.26■□□□□ 0.19
SCARF1-205ENST00000571272 OR6C4Q8NGE1 309 aa16.26■□□□□ 0.19
SCARF1-205ENST00000571272 TTC9Q92623 222 aa16.26■□□□□ 0.19
SCARF1-205ENST00000571272 OTUB2Q96DC9 234 aa16.26■□□□□ 0.19
SCARF1-205ENST00000571272 ZFP3Q96NJ6 502 aa16.26■□□□□ 0.19
SCARF1-205ENST00000571272 TTTY10Q9BZA0 68 aa16.26■□□□□ 0.19
SCARF1-205ENST00000571272 GHITMQ9H3K2 345 aa16.26■□□□□ 0.19
SCARF1-205ENST00000571272 TRIM36Q9NQ86 728 aa16.26■□□□□ 0.19
SCARF1-205ENST00000571272 A0A0B4J203 849 aa16.25■□□□□ 0.19
SCARF1-205ENST00000571272 ABHD14A-ACY1A0A1B0GW23 586 aa16.25■□□□□ 0.19
SCARF1-205ENST00000571272 OTOL1A6NHN0 477 aaPredicted RBP16.25■□□□□ 0.19
SCARF1-205ENST00000571272 CSF2RAP15509 400 aa16.25■□□□□ 0.19
SCARF1-205ENST00000571272 CEBPBP17676 345 aa16.25■□□□□ 0.19
SCARF1-205ENST00000571272 RBMS1P29558 406 aaKnown RBP16.25■□□□□ 0.19
SCARF1-205ENST00000571272 RFX3P48380 749 aa16.25■□□□□ 0.19
SCARF1-205ENST00000571272 PER3P56645 1201 aa16.25■□□□□ 0.19
SCARF1-205ENST00000571272 FXYD6P3P58550 94 aa16.25■□□□□ 0.19
SCARF1-205ENST00000571272 CAMK1Q14012 370 aa16.25■□□□□ 0.19
SCARF1-205ENST00000571272 ZIC1Q15915 447 aa16.25■□□□□ 0.19
SCARF1-205ENST00000571272 TMEM52BQ4KMG9 183 aa16.25■□□□□ 0.19
SCARF1-205ENST00000571272 CCNJQ5T5M9 372 aa16.25■□□□□ 0.19
SCARF1-205ENST00000571272 FRRS1Q6ZNA5 592 aa16.25■□□□□ 0.19
SCARF1-205ENST00000571272 OR13C5Q8NGS8 318 aa16.25■□□□□ 0.19
SCARF1-205ENST00000571272 PFN4Q8NHR9 129 aa16.25■□□□□ 0.19
SCARF1-205ENST00000571272 NR4A3Q92570 626 aa16.25■□□□□ 0.19
SCARF1-205ENST00000571272 CLIP3Q96DZ5 547 aa16.25■□□□□ 0.19
SCARF1-205ENST00000571272 C20orf141Q9NUB4 165 aa16.25■□□□□ 0.19
SCARF1-205ENST00000571272 SLCO1C1Q9NYB5 712 aa16.25■□□□□ 0.19
SCARF1-205ENST00000571272 PLEKHM1Q9Y4G2 1056 aa16.25■□□□□ 0.19
SCARF1-205ENST00000571272 UNC80Q8N2C7 3258 aa16.25■□□□□ 0.19
SCARF1-205ENST00000571272 GIMAP1-GIMAP5A0A087WTJ2 511 aa16.25■□□□□ 0.19
SCARF1-205ENST00000571272 FZD7O75084 574 aa16.25■□□□□ 0.19
SCARF1-205ENST00000571272 GKN3PP0CG01 181 aa16.25■□□□□ 0.19
SCARF1-205ENST00000571272 PRG2P13727 222 aa16.25■□□□□ 0.19
SCARF1-205ENST00000571272 NPR2P20594 1047 aa16.25■□□□□ 0.19
SCARF1-205ENST00000571272 GIFP27352 417 aa16.25■□□□□ 0.19
SCARF1-205ENST00000571272 RAB28P51157 221 aa16.25■□□□□ 0.19
SCARF1-205ENST00000571272 ZNF234Q14588 700 aa16.25■□□□□ 0.19
SCARF1-205ENST00000571272 ADAMTSL4Q6UY14 1074 aa16.25■□□□□ 0.19
SCARF1-205ENST00000571272 RAB42Q8N4Z0 105 aa16.25■□□□□ 0.19
SCARF1-205ENST00000571272 WFIKKN2Q8TEU8 576 aa16.25■□□□□ 0.19
SCARF1-205ENST00000571272 MOAP1Q96BY2 351 aa16.25■□□□□ 0.19
SCARF1-205ENST00000571272 GIMAP5Q96F15 307 aa16.25■□□□□ 0.19
SCARF1-205ENST00000571272 ACTRT3Q9BYD9 372 aa16.25■□□□□ 0.19
SCARF1-205ENST00000571272 BEX1Q9HBH7 125 aa16.25■□□□□ 0.19
SCARF1-205ENST00000571272 SLC6A20Q9NP91 592 aa16.25■□□□□ 0.19
SCARF1-205ENST00000571272 MBNL1Q9NR56 388 aaKnown RBP16.25■□□□□ 0.19
SCARF1-205ENST00000571272 UCKL1Q9NWZ5 548 aa16.25■□□□□ 0.19
SCARF1-205ENST00000571272 B3GNT2Q9NY97 397 aa16.25■□□□□ 0.19
SCARF1-205ENST00000571272 CALML5Q9NZT1 146 aa16.25■□□□□ 0.19
SCARF1-205ENST00000571272 ZNF443Q9Y2A4 671 aaPredicted RBP16.25■□□□□ 0.19
SCARF1-205ENST00000571272 ZNF780BQ9Y6R6 833 aa16.25■□□□□ 0.19
SCARF1-205ENST00000571272 TEX13CA0A0J9YWL9 993 aa16.24■□□□□ 0.19
SCARF1-205ENST00000571272 J3QLW9 94 aa16.24■□□□□ 0.19
SCARF1-205ENST00000571272 PCDH8O95206 1070 aa16.24■□□□□ 0.19
SCARF1-205ENST00000571272 CLUP10909 449 aa16.24■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms