RNA–Protein interactions for RNA: ENST00000570874.1

SMG6-208, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG6, Length 533 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-208ENST00000570874 SLC6A9P48067 706 aa3.31□□□□□ -1.88
SMG6-208ENST00000570874 NPY2RP49146 381 aa3.31□□□□□ -1.88
SMG6-208ENST00000570874 TMED10P49755 219 aaKnown RBP3.31□□□□□ -1.88
SMG6-208ENST00000570874 EPHA5P54756 1037 aa3.31□□□□□ -1.88
SMG6-208ENST00000570874 UCP3P55916 312 aa3.31□□□□□ -1.88
SMG6-208ENST00000570874 SEC61GP60059 68 aa3.31□□□□□ -1.88
SMG6-208ENST00000570874 NCALDP61601 193 aa3.31□□□□□ -1.88
SMG6-208ENST00000570874 AP1S1P61966 158 aa3.31□□□□□ -1.88
SMG6-208ENST00000570874 RPL11P62913 178 aaKnown RBP3.31□□□□□ -1.88
SMG6-208ENST00000570874 SLC7A9P82251 487 aa3.31□□□□□ -1.88
SMG6-208ENST00000570874 CDK16Q00536 496 aa3.31□□□□□ -1.88
SMG6-208ENST00000570874 MC2RQ01718 297 aa3.31□□□□□ -1.88
SMG6-208ENST00000570874 OCA2Q04671 838 aa3.31□□□□□ -1.88
SMG6-208ENST00000570874 CHRNEQ04844 493 aa3.31□□□□□ -1.88
SMG6-208ENST00000570874 ZFP36L1Q07352 338 aaKnown RBP3.31□□□□□ -1.88
SMG6-208ENST00000570874 SIGLEC14Q08ET2 396 aa3.31□□□□□ -1.88
SMG6-208ENST00000570874 MESP2Q0VG99 397 aa3.31□□□□□ -1.88
SMG6-208ENST00000570874 DLG1Q12959 904 aa3.31□□□□□ -1.88
SMG6-208ENST00000570874 SLAMF1Q13291 335 aa3.31□□□□□ -1.88
SMG6-208ENST00000570874 ITGADQ13349 1161 aa3.31□□□□□ -1.88
SMG6-208ENST00000570874 RIN1Q13671 783 aa3.31□□□□□ -1.88
SMG6-208ENST00000570874 SELPLGQ14242 412 aa3.31□□□□□ -1.88
SMG6-208ENST00000570874 ZNF235Q14590 738 aa3.31□□□□□ -1.88
SMG6-208ENST00000570874 CARTPTQ16568 116 aa3.31□□□□□ -1.88
SMG6-208ENST00000570874 NKG7Q16617 165 aa3.31□□□□□ -1.88
SMG6-208ENST00000570874 CPSF6Q16630 551 aaKnown RBP eCLIP3.31□□□□□ -1.88
SMG6-208ENST00000570874 SMN1Q16637 294 aaKnown RBP3.31□□□□□ -1.88
SMG6-208ENST00000570874 VWC2Q2TAL6 325 aa3.31□□□□□ -1.88
SMG6-208ENST00000570874 PTCHD3Q3KNS1 767 aa3.31□□□□□ -1.88
SMG6-208ENST00000570874 POM121L1PQ3SYA9 428 aa3.31□□□□□ -1.88
SMG6-208ENST00000570874 PARP15Q460N3 678 aa3.31□□□□□ -1.88
SMG6-208ENST00000570874 ATP13A5Q4VNC0 1218 aa3.31□□□□□ -1.88
SMG6-208ENST00000570874 C5orf47Q569G3 176 aa3.31□□□□□ -1.88
SMG6-208ENST00000570874 SLC25A53Q5H9E4 307 aa3.31□□□□□ -1.88
SMG6-208ENST00000570874 LRRC73Q5JTD7 316 aa3.31□□□□□ -1.88
SMG6-208ENST00000570874 TSTD2Q5T7W7 516 aa3.31□□□□□ -1.88
SMG6-208ENST00000570874 N4BP2L1Q5TBK1 243 aaPredicted RBP3.31□□□□□ -1.88
SMG6-208ENST00000570874 DDI2Q5TDH0 399 aa3.31□□□□□ -1.88
SMG6-208ENST00000570874 LGSNQ5TDP6 509 aa3.31□□□□□ -1.88
SMG6-208ENST00000570874 SAMD5Q5TGI4 173 aa3.31□□□□□ -1.88
SMG6-208ENST00000570874 MARC1Q5VT66 337 aa3.31□□□□□ -1.88
SMG6-208ENST00000570874 ZNF691Q5VV52 312 aa3.31□□□□□ -1.88
SMG6-208ENST00000570874 PRAMEF13Q5VWM6 474 aa3.31□□□□□ -1.88
SMG6-208ENST00000570874 PMS2CLQ68D20 193 aa3.31□□□□□ -1.88
SMG6-208ENST00000570874 TIGD3Q6B0B8 471 aa3.31□□□□□ -1.88
SMG6-208ENST00000570874 ABLIM2Q6H8Q1 611 aa3.31□□□□□ -1.88
SMG6-208ENST00000570874 TMEM211Q6ICI0 200 aa3.31□□□□□ -1.88
SMG6-208ENST00000570874 CDPF1Q6NVV7 123 aa3.31□□□□□ -1.88
SMG6-208ENST00000570874 RNASEKQ6P5S7 137 aaKnown RBP3.31□□□□□ -1.88
SMG6-208ENST00000570874 ZC3H14Q6PJT7 736 aaKnown RBP3.31□□□□□ -1.88
SMG6-208ENST00000570874 UNQ6494/PRO21346Q6UXR6 183 aa3.31□□□□□ -1.88
SMG6-208ENST00000570874 PRR23BQ6ZRT6 265 aa3.31□□□□□ -1.88
SMG6-208ENST00000570874 ZCCHC23Q6ZST2 131 aa3.31□□□□□ -1.88
SMG6-208ENST00000570874 MED25Q71SY5 747 aa3.31□□□□□ -1.88
SMG6-208ENST00000570874 DET1Q7L5Y6 550 aa3.31□□□□□ -1.88
SMG6-208ENST00000570874 ERASQ7Z444 233 aa3.31□□□□□ -1.88
SMG6-208ENST00000570874 PTAR1Q7Z6K3 402 aaPredicted RBP3.31□□□□□ -1.88
SMG6-208ENST00000570874 ITIH5Q86UX2 942 aa3.31□□□□□ -1.88
SMG6-208ENST00000570874 CATSPERDQ86XM0 798 aa3.31□□□□□ -1.88
SMG6-208ENST00000570874 TMEM25Q86YD3 366 aa3.31□□□□□ -1.88
SMG6-208ENST00000570874 FAM219AQ8IW50 185 aa3.31□□□□□ -1.88
SMG6-208ENST00000570874 SFTPA1Q8IWL2 248 aa3.31□□□□□ -1.88
SMG6-208ENST00000570874 AQP12AQ8IXF9 295 aa3.31□□□□□ -1.88
SMG6-208ENST00000570874 KLHDC8AQ8IYD2 350 aa3.31□□□□□ -1.88
SMG6-208ENST00000570874 CMTM8Q8IZV2 173 aa3.31□□□□□ -1.88
SMG6-208ENST00000570874 RBFAQ8N0V3 343 aa3.31□□□□□ -1.88
SMG6-208ENST00000570874 GTPBP8Q8N3Z3 284 aaPredicted RBP3.31□□□□□ -1.88
SMG6-208ENST00000570874 SPATA6LQ8N4H0 392 aa3.31□□□□□ -1.88
SMG6-208ENST00000570874 NAT16Q8N8M0 369 aa3.31□□□□□ -1.88
SMG6-208ENST00000570874 CYB561A3Q8NBI2 242 aa3.31□□□□□ -1.88
SMG6-208ENST00000570874 ACBD4Q8NC06 268 aa3.31□□□□□ -1.88
SMG6-208ENST00000570874 HJURPQ8NCD3 748 aaPredicted RBP3.31□□□□□ -1.88
SMG6-208ENST00000570874 ADPRHL1Q8NDY3 354 aa3.31□□□□□ -1.88
SMG6-208ENST00000570874 BEND2Q8NDZ0 799 aa3.31□□□□□ -1.88
SMG6-208ENST00000570874 CPEB3Q8NE35 698 aaKnown RBP3.31□□□□□ -1.88
SMG6-208ENST00000570874 MDGA1Q8NFP4 955 aa3.31□□□□□ -1.88
SMG6-208ENST00000570874 OR51L1Q8NGJ5 315 aa3.31□□□□□ -1.88
SMG6-208ENST00000570874 OR5D13Q8NGL4 314 aa3.31□□□□□ -1.88
SMG6-208ENST00000570874 OR13J1Q8NGT2 312 aa3.31□□□□□ -1.88
SMG6-208ENST00000570874 LHFPL5Q8TAF8 219 aa3.31□□□□□ -1.88
SMG6-208ENST00000570874 PNPT1Q8TCS8 783 aaKnown RBP3.31□□□□□ -1.88
SMG6-208ENST00000570874 BLOC1S5Q8TDH9 187 aa3.31□□□□□ -1.88
SMG6-208ENST00000570874 AGAP11Q8TF27 550 aa3.31□□□□□ -1.88
SMG6-208ENST00000570874 SCARB1Q8WTV0 552 aa3.31□□□□□ -1.88
SMG6-208ENST00000570874 KCTD4Q8WVF5 259 aa3.31□□□□□ -1.88
SMG6-208ENST00000570874 RAB40AQ8WXH6 277 aa3.31□□□□□ -1.88
SMG6-208ENST00000570874 SORCS1Q8WY21 1168 aa3.31□□□□□ -1.88
SMG6-208ENST00000570874 CNOT9Q92600 299 aaKnown RBP3.31□□□□□ -1.88
SMG6-208ENST00000570874 MRPS31Q92665 395 aaKnown RBP3.31□□□□□ -1.88
SMG6-208ENST00000570874 OSTF1Q92882 214 aa3.31□□□□□ -1.88
SMG6-208ENST00000570874 RIT1Q92963 219 aa3.31□□□□□ -1.88
SMG6-208ENST00000570874 SCAMP4Q969E2 229 aa3.31□□□□□ -1.88
SMG6-208ENST00000570874 SLC38A4Q969I6 547 aa3.31□□□□□ -1.88
SMG6-208ENST00000570874 RPL10LQ96L21 214 aaKnown RBP3.31□□□□□ -1.88
SMG6-208ENST00000570874 LRR1Q96L50 414 aa3.31□□□□□ -1.88
SMG6-208ENST00000570874 RNF145Q96MT1 663 aa3.31□□□□□ -1.88
SMG6-208ENST00000570874 TRIB3Q96RU7 358 aa3.31□□□□□ -1.88
SMG6-208ENST00000570874 RBBP8Q99708 897 aa3.31□□□□□ -1.88
SMG6-208ENST00000570874 PRRT1Q99946 306 aa3.31□□□□□ -1.88
SMG6-208ENST00000570874 CENPKQ9BS16 269 aa3.31□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 63.5 ms